rna10259, rna10259 (mRNA) Nannochloropsis gaditana

Overview
Namerna10259
Unique Namerna10259
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1072
Alignment locationKK037268.1:13051..13787 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101657g3.5461.mrna
Orig protein idgnl|cribi|Naga_101657g3.5461
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:13051..13787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101657g3gene9961Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20446.1cds10228Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10259rna10259-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10259 ID=rna10259|Name=rna10259|organism=Nannochloropsis gaditana|type=mRNA|length=1072bp
CGACGGGCGCGATGGGAATGATTGTAGCCGGACGCAATACAGGGATAGGA
ATAGGCATCAAGGGAGGAAAGGAGGGAAGGAGGTCGTAGGAGAGGGGGGG
AGAGGAGTCAAGGAAGGGGTGGAGGAAGGCGAGGAAGCAGGAAAGGGATC
TGGGCGTCATCGAGCCTAATGACCCCCACATTCCGATGCACATGCGTACA
AATCCATATATAAAGCACAGGCATTCACACCCCAGAGAGGAAGGCTCGTC
TGCCCATCAAGTAAACGCAAACAAAGCCACCGCGCGCGAACGCTCTTTCC
CCTGTCCAAGAGCTCCCCTTTCTCAGCCTCCCCTCCCTCCCCCTCGCCGC
ACTGGCCTCATCACCTTAAGACGTCTTTGTTTCTTTCGACCGTGGTCCCT
TCCTTCGCCCTCGTGCGCCCTCCACTGCATCGAGACAGCCGTTATCTCCT
CGCCTGCCCCCCTAGGCGCTCGTTCCGTCTTTGCAATCCCTTCCCATTCG
TGCATCACCTTCCCTCCCATCATGCCCTTCGCCCTCCTTCTCCTCCTTTC
CTTCTCCACGGCCGTTTCCTAGCGCTTGCCCCCTCCTTCCCTCCCCCCTC
CTCACAGCTAGGTTGTTCTCCCCCACTCCTACTGAAGCTCATCCCAAGTC
TTCGCTAACAACCTCCAGCCCCTTCTCAAGCCCTCCTCCCCTTCCTCGCC
ATCCAGTCGCTGCAGCAACAGTCTGTACACCTCCGGGGCCACCCGTTCTC
CCTCCCTCCCTTCCTCCCTCCCTCCCTCCCCCCGTCCCTCCCTCCCTTGG
CTTCTTCCCTCCATGTACTCACAGAGCTCTAGAAGCCCTCTTGTCCCACA
CGCCTCCAAAATGGCGCGAAACGTGTTCATATTGGGGGTTAAGGTAGGGA
ACGAGCTGAGCAAGCCTTTCAGGAGCGACAAGGGGGAAGGGGAGGGTGGC
AGGGGAGGGGACAAGGAAGGAGGGGGGGAAGTCTGGGGCTGTCGGTGAAG
ACGGAGGGTGTGAGCGAGGAGACTGTTCAAGGAGAAAGCGTCCGGAGCTA
CGCCGAGGCCTTCCATGAGCTC
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protein sequence of rna10259

>rna10259-protein ID=rna10259-protein|Name=rna10259|organism=Nannochloropsis gaditana|type=polypeptide|length=161bp
PPRSLPRPPCRQVFELMEGLGVAPDAFSLNSLLAHTLRLHRQPQTSPPPS
LSPPLPPSPSPLSLLKGLLSSFPTLTPNMNTFRAILEACGTRGLLELCEY
MEGRSQGREGRGEGGREEGREGERVAPEVYRLLLQRLDGEEGEEGLRRGW
RLLAKTWDELQ
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mRNA from alignment at KK037268.1:13051..13787-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10259 ID=rna10259|Name=rna10259|organism=Nannochloropsis gaditana|type=mRNA|length=737bp|location=Sequence derived from alignment at KK037268.1:13051..13787- (Nannochloropsis gaditana)
CCTCCTCGCTCCCTCCCCCGCCCCCCCTGCCGGCAGGTCTTCGAGCTCAT
GGAAGGCCTCGGCGTAGCTCCGGACGCTTTCTCCTTGAACAGTCTCCTCG
CTCACACCCTCCGTCTTCACCGACAGCCCCAGACTTCCCCCCCTCCTTCC
TTGTCCCCTCCCCTGCCACCCTCCCCTTCCCCCTTGTCGCTCCTGAAAGG
CTTGCTCAGCTCGTTCCCTACCTTAACCCCCAATATGAACACGTTTCGCG
CCATTTTGGAGGCGTGTGGGACAAGAGGGCTTCTAGAGCTCTGTGAGTAC
ATGGAGGGAAGAAGCCAAGGGAGGGAGGGACGGGGGGAGGGAGGGAGGGA
GGAAGGGAGGGAGGGAGAACGGGTGGCCCCGGAGGTGTACAGACTGTTGC
TGCAGCGACTGGATGGCGAGGAAGGGGAGGAGGGCTTGAGAAGGGGCTGG
AGGTTGTTAGCGAAGACTTGGGATGAGCTTCAGTAGGAGTGGGGGAGAAC
AACCTAGCTGTGAGGAGGGGGGAGGGAAGGAGGGGGCAAGCGCTAGGAAA
CGGCCGTGGAGAAGGAAAGGAGGAGAAGGAGGGCGAAGGGCATGATGGGA
GGGAAGGTGATGCACGAATGGGAAGGGATTGCAAAGACGGAACGAGCGCC
TAGGGGGGCAGGCGAGGAGATAACGGCTGTCTCGATGCAGTGGAGGGCGC
ACGAGGGCGAAGGAAGGGACCACGGTCGAAAGAAACA
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Coding sequence (CDS) from alignment at KK037268.1:13051..13787-

>rna10259 ID=rna10259|Name=rna10259|organism=Nannochloropsis gaditana|type=CDS|length=486bp|location=Sequence derived from alignment at KK037268.1:13051..13787- (Nannochloropsis gaditana)
CCTCCTCGCTCCCTCCCCCGCCCCCCCTGCCGGCAGGTCTTCGAGCTCAT
GGAAGGCCTCGGCGTAGCTCCGGACGCTTTCTCCTTGAACAGTCTCCTCG
CTCACACCCTCCGTCTTCACCGACAGCCCCAGACTTCCCCCCCTCCTTCC
TTGTCCCCTCCCCTGCCACCCTCCCCTTCCCCCTTGTCGCTCCTGAAAGG
CTTGCTCAGCTCGTTCCCTACCTTAACCCCCAATATGAACACGTTTCGCG
CCATTTTGGAGGCGTGTGGGACAAGAGGGCTTCTAGAGCTCTGTGAGTAC
ATGGAGGGAAGAAGCCAAGGGAGGGAGGGACGGGGGGAGGGAGGGAGGGA
GGAAGGGAGGGAGGGAGAACGGGTGGCCCCGGAGGTGTACAGACTGTTGC
TGCAGCGACTGGATGGCGAGGAAGGGGAGGAGGGCTTGAGAAGGGGCTGG
AGGTTGTTAGCGAAGACTTGGGATGAGCTTCAGTAG
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Synonyms
Publications