EWM20446.1, cds10228 (CDS) Nannochloropsis gaditana

Overview
NameEWM20446.1
Unique Namecds10228
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:13302..13787 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20446.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101657g3.5461.mrna
GbkeyCDS
End range.
End range13787
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:13302..13787 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20446.1 vs. NCBI_GenBank
Match: gi|585100071|gb|EWM20446.1| (hypothetical protein Naga_101657g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 313.153 bits (801), Expect = 9.334e-108
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 PPRSLPRPPCRQVFELMEGLGVAPDAFSLNSLLAHTLRLHRQPQTSPPPSLSPPLPPSPSPLSLLKGLLSSFPTLTPNMNTFRAILEACGTRGLLELCEYMEGRSQGREGRGEGGREEGREGERVAPEVYRLLLQRLDGEEGEEGLRRGWRLLAKTWDELQ 161
            PPRSLPRPPCRQVFELMEGLGVAPDAFSLNSLLAHTLRLHRQPQTSPPPSLSPPLPPSPSPLSLLKGLLSSFPTLTPNMNTFRAILEACGTRGLLELCEYMEGRSQGREGRGEGGREEGREGERVAPEVYRLLLQRLDGEEGEEGLRRGWRLLAKTWDELQ
Sbjct:    1 PPRSLPRPPCRQVFELMEGLGVAPDAFSLNSLLAHTLRLHRQPQTSPPPSLSPPLPPSPSPLSLLKGLLSSFPTLTPNMNTFRAILEACGTRGLLELCEYMEGRSQGREGRGEGGREEGREGERVAPEVYRLLLQRLDGEEGEEGLRRGWRLLAKTWDELQ 161
The following BLAST results are available for this feature:
BLAST of EWM20446.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100071|gb|EWM20446.1|9.334e-108100.00hypothetical protein Naga_101657g3, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10259rna10259Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications