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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1415 |
| Orig transcript id | gnl|cribi|Naga_100050g38.6848.mrna |
| Orig protein id | gnl|cribi|Naga_100050g38.6848 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:989544..991113 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1023 ID=rna1023|Name=rna1023|organism=Nannochloropsis gaditana|type=mRNA|length=816bp
ATGCAATCGCATAATGTCGTCTCTTTATCTACAGTTGTTGCAGGCACCTT
ATCAAACATGCGAGTGGTCACGTTTGCGTCATTTGCACTGGCTGTGTTTC
CCTTCGTGACGAATGCTTGGACAATGAAGGCCGGCATGTCTGACTCGCAA
GGTCGCTGCCGCATTCCCCCGTCAGCCAGTGCACCCCGGAGTCGAAGGGA
CGCCCTGTGTATTGGATCCATCCCAGCCGTGACCTTGGGTTTCGCGGCGA
GCGGCTTGATTCTACAATACCCTAGACGAACGGAAGCCGCGTTTCCTTTC
GGAGGAGATGGGGACGTGGCAGGTCAGCTCGACGACGTTGCGCGGGCTCG
TCAGAAGGTGGAAGAGGTCTTAAGTGGTCTTAAATCGAAGCAGCTGAAGG
GCGGAAAGGATGACTCCGCGACCGTCGTGCGATATATGGACGCACACTAC
AAGCCATTGCAGGAGAAAATGGTCACGTTAGCGCCCAAGATGAAGGTGGG
CGACGAAGAAAAGCAGAAGCGTCTCGAGACTTTGCCGCTGCTCTTAAAGG
GGCATCTATTCGAGCTGGCCGCCGCGGCGCGCACTGGAGTCGCTGCAGAG
CAACTGCAAGAGATGGAGGAAGTGGCTGAATCGGTGGATGAATTTTTGGC
CCTGGCGAGAGAGTCTGGGAGGTATCAGGTGAGGGATTACCTGGGGCCCG
CCCCGGAGTTCGACGTCAAACGGGAATACGGGCCTTTCGCCTGCGAGTTT
TGGGGCAAAGTCCGCCTGCCCGAGAGTAACGTGTGCGTATGGCCCGACGA
GGTGGAAAAGAAATAG back to topprotein sequence of rna1023 >rna1023-protein ID=rna1023-protein|Name=rna1023|organism=Nannochloropsis gaditana|type=polypeptide|length=398bp
MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLR
LVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPW
SNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCST
TRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDA
AVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVL
EEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQH
VVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGL
TEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV back to topmRNA from alignment at CM002456.1:989544..991113- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1023 ID=rna1023|Name=rna1023|organism=Nannochloropsis gaditana|type=mRNA|length=1570bp|location=Sequence derived from alignment at CM002456.1:989544..991113- (Nannochloropsis gaditana)
CTGTAATTTCGTTCTCCGGGGACAAGACACTGTGAAACATTTGGGGAAAG
GTTATGAGAGTAGATGCGGGGCTAGTGAGAACCCAGTCGCTAAAATCGCT
TGCTTTCACTGGCAGTTTCCTCTCGAGGGTTTTTCGAAGAGTCTCACAGG
TTCTGCCAATCGTTTGCATAAAAAAGACGTCTTTCTCCGAGCCTGGTGGT
AATGCGAAAGTCCTGGTATATCATGGCTAAGTTAAACATTTGATGGAAGC
TTAAACGCTCCAACCAACCTCCTCCCTGCTGAAGCATTCAGACGCTGCGC
TGACCAGCATAAGCTTTGCATCCACAATGATCTGCATGAAGCCCGGGCTC
TTAAAAACAAATTTTATATTTGAAGCTAGCTTTTCGAAGACGATGAAAGA
CCATTATGGTGTGCGCATAAAGTCGTGTTGTGAGAAAGTGCTCAATATGG
CAAGCAACCGCATCTCCTCACTGCGGCTGGTGTGTTGCCTTCTAGCCGGT
GACTGTGCGACAGGGCATTATGGTCGAATGTGGTTCATGTTCAAATGTAA
TGAGTGGCGGAGTATGATTCACATACACTCTTTATGTTCTGTAGATACCC
CTCGTACAGGTGCATGCATGCCTTGGTCAAATCGAAGAAGTCCCACATCC
ACTGTCCTTCGGTTTGGTTTGTCCCTCGTCCTTCTCAGGGGACCATCCGG
TTTTTCAACCAGAAGATCACCCTATGCACGGACAAACGAAATAAACAGCC
TTCCAGGGCGTCGTTTTTGCAGCACCACCCGTCCACGTGGTTTCACACAT
ACAATCGCGTTGTCTCCAATTGGCCTCTCACCTCTACCTTCCAAAATCGT
AGCCCTGCCTGCCTCTTCTTCCACCAGTTCCTCTTCGTTTAACCCCTCGT
CATCTCCGTCTGGAATGGACGATGCGGCTGTCATAGCGCGTACCCAAGCT
TGGATACACAATATGGTCATTCGCATCCCACTCTGCCCCTTTGCGGAGAA
AGTAGTGCAAGACAACACCGTTCGTTACGTCGTTGTTCGAGCCCGGAGAA
AGAGTGACATAATTGCACATGTCCTAGAAGAGGCTAGAGCCTTGGTCGAG
ACGCCCGAGGACGTGACCGCCACAACCATCGTCCTCGCCCCCGACGCCTT
TGTCGAAGATTTTTCCGCGTTCTACGAGACAGAGCGCTTCCTGGAGGCAT
CTTTGGAAGCGTCGGATCTTCAACATGTCGTCCTATTGGCAGCATTTCAT
CCGCAGTACACGTTCGGGGGTGGACTGTCGGAGCTGGATCCCATACATTT
TGAAAAGCGCTCGCCTTTCCCGGTGTTCAATTTGCTACGAGCGGAGAGGG
TGTGGGCCTACGCGAACGAAGGATTGACCGAGAAGATTGCGGATCGGAAC
GAAGCGGCATTGGCTGCGATCGGGATCGACGAGGTGCGAAGGAGATTCAC
CTTGTCGGAGAAAGAAGTAGAGCGATATAATGGGGGGAAGGAATACGGAG
TCTCAGAAGGAAGCGGGGTTTAAAGCTGCAAGAAGTACATGACCTGCAAA
TGAAAGAGACCGGGTCTCGA back to topCoding sequence (CDS) from alignment at CM002456.1:989544..991113- >rna1023 ID=rna1023|Name=rna1023|organism=Nannochloropsis gaditana|type=CDS|length=1197bp|location=Sequence derived from alignment at CM002456.1:989544..991113- (Nannochloropsis gaditana)
ATGATCTGCATGAAGCCCGGGCTCTTAAAAACAAATTTTATATTTGAAGC
TAGCTTTTCGAAGACGATGAAAGACCATTATGGTGTGCGCATAAAGTCGT
GTTGTGAGAAAGTGCTCAATATGGCAAGCAACCGCATCTCCTCACTGCGG
CTGGTGTGTTGCCTTCTAGCCGGTGACTGTGCGACAGGGCATTATGGTCG
AATGTGGTTCATGTTCAAATGTAATGAGTGGCGGAGTATGATTCACATAC
ACTCTTTATGTTCTGTAGATACCCCTCGTACAGGTGCATGCATGCCTTGG
TCAAATCGAAGAAGTCCCACATCCACTGTCCTTCGGTTTGGTTTGTCCCT
CGTCCTTCTCAGGGGACCATCCGGTTTTTCAACCAGAAGATCACCCTATG
CACGGACAAACGAAATAAACAGCCTTCCAGGGCGTCGTTTTTGCAGCACC
ACCCGTCCACGTGGTTTCACACATACAATCGCGTTGTCTCCAATTGGCCT
CTCACCTCTACCTTCCAAAATCGTAGCCCTGCCTGCCTCTTCTTCCACCA
GTTCCTCTTCGTTTAACCCCTCGTCATCTCCGTCTGGAATGGACGATGCG
GCTGTCATAGCGCGTACCCAAGCTTGGATACACAATATGGTCATTCGCAT
CCCACTCTGCCCCTTTGCGGAGAAAGTAGTGCAAGACAACACCGTTCGTT
ACGTCGTTGTTCGAGCCCGGAGAAAGAGTGACATAATTGCACATGTCCTA
GAAGAGGCTAGAGCCTTGGTCGAGACGCCCGAGGACGTGACCGCCACAAC
CATCGTCCTCGCCCCCGACGCCTTTGTCGAAGATTTTTCCGCGTTCTACG
AGACAGAGCGCTTCCTGGAGGCATCTTTGGAAGCGTCGGATCTTCAACAT
GTCGTCCTATTGGCAGCATTTCATCCGCAGTACACGTTCGGGGGTGGACT
GTCGGAGCTGGATCCCATACATTTTGAAAAGCGCTCGCCTTTCCCGGTGT
TCAATTTGCTACGAGCGGAGAGGGTGTGGGCCTACGCGAACGAAGGATTG
ACCGAGAAGATTGCGGATCGGAACGAAGCGGCATTGGCTGCGATCGGGAT
CGACGAGGTGCGAAGGAGATTCACCTTGTCGGAGAAAGAAGTAGAGCGAT
ATAATGGGGGGAAGGAATACGGAGTCTCAGAAGGAAGCGGGGTTTAA back to top
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