EWM29625.1, cds1022 (CDS) Nannochloropsis gaditana

Overview
NameEWM29625.1
Unique Namecds1022
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:989591..990787 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29625.1
ProductProtein of unknown function DUF1415
Orig transcript idgnl|cribi|Naga_100050g38.6848.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:989591..990787 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009858DUF1415
Homology
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|585112197|gb|EWM29625.1| (Protein of unknown function DUF1415 [Nannochloropsis gaditana])

HSP 1 Score: 823.157 bits (2125), Expect = 0.000e+0
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query:    1 MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV 398
            MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV
Sbjct:    1 MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV 398          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1094735521|emb|SEQ20378.1| (hypothetical protein SAMN03080615_00673 [Amphritea atlantica])

HSP 1 Score: 111.694 bits (278), Expect = 2.036e-25
Identity = 67/180 (37.22%), Postives = 100/180 (55.56%), Query Frame = 0
Query:  196 GMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLR-AERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
            G   A V   T+ W+  MV+ + LCPFA  VV+DNT+RY V  A+    ++A  L E   L+   E   +TT+ + PD  ++DF  + +  R  E  LE + L+ V+ LA+FHP Y F  G+ E D  H+  RSP+P F+++R AE   A  +    E+I +RN   L  +G + + RRF
Sbjct:    7 GYSPAEVEKITREWVETMVVGLNLCPFAAPVVRDNTLRYAVTTAQEGESLVAAFLAEIELLLAADEKTVSTTLFIVPDG-LQDFYDYLDHLRLFEELLEQAGLEGVLQLASFHPAYRF-EGVPEDDLSHWSNRSPWPAFHIIREAEMGRALTHYANPEQIPERNIKLLRELGREGLIRRF 184          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|518451080|ref|WP_019621287.1| (hypothetical protein [Amphritea japonica])

HSP 1 Score: 108.227 bits (269), Expect = 3.646e-24
Identity = 62/170 (36.47%), Postives = 97/170 (57.06%), Query Frame = 0
Query:  206 TQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLR-AERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
            T+ W+  MV+ + LCPFA  VV+DN++RY +  AR    ++A  + E   L+   E   +TT+ + P   +EDF  + +  R  E  LE + L+ V+ LA+FHP Y F  G++E D  H+  RSP+PVF+++R AE   A  +    E+I +RN   L  +G + +  RF
Sbjct:   17 TRQWVETMVVGLNLCPFAAPVVKDNSLRYAITDARGSESLVAAFMAEIEQLLAASEKEISTTLFIVPTG-LEDFYDYLDHLRLFEELLEQAGLEGVIQLASFHPGYLF-HGVAEDDLSHWSNRSPWPVFHIIREAEMSRALTHYSNPEQIPERNIKRLRELGREALIERF 184          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1054087042|ref|WP_066150926.1| (DUF1415 domain-containing protein [Hydrogenophaga pseudoflava])

HSP 1 Score: 106.301 bits (264), Expect = 1.390e-23
Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 0
Query:  197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANE-GLTEKIADRNEAALAAIG 366
            M D  V+A T+ WI   VI + LCPFA  V   N VR VV RAR     +  +  E   LV TP +   TT+++ P  F  DF  F +    ++  +   +L+ V+ +A FHPQ+ F G  ++ DP HF  R+P+P  +LLR + V  A A+E G  EKI +RN A L  +G
Sbjct:    1 MTDEQVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHLDAFLDELDRELDLLVNTPAEEIDTTLLVHPTLF-PDFEVFNDFMNVVDDVVAEHELEGVIQVANFHPQFLFDGEAAD-DPSHFTNRAPYPTLHLLREDSVERAVASEGGDAEKIVERNIATLRTLG 170          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1054450495|ref|WP_066262145.1| (DUF1415 domain-containing protein [Hydrogenophaga flava])

HSP 1 Score: 103.99 bits (258), Expect = 1.011e-22
Identity = 65/172 (37.79%), Postives = 92/172 (53.49%), Query Frame = 0
Query:  197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW--AYANEGLTEKIADRNEAALAAIG 366
            + D  V+A T+ WI   VI + LCPFA  V   N VR VV RAR     +  +  E   LV TP D   TT+++ P  F  DF  F +    ++  +   +L+ VV +A FHP+Y F G  ++ D  HF  R+P+P  +LLR + V     ++ G  EKI +RN A L A+G
Sbjct:    3 LSDDTVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHLDAFLDELDRELDLLVNTPADEIDTTLLVHPTLF-PDFEVFNDFMNVVDDVVAEHELEGVVQVANFHPEYLFEGEAAD-DASHFTNRAPYPTLHLLREDSVERAVESDGGDAEKIVERNIATLRALG 172          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1090777373|emb|SEG83832.1| (hypothetical protein SAMN05444390_10634 [Marinobacterium lutimaris])

HSP 1 Score: 104.375 bits (259), Expect = 1.221e-22
Identity = 62/170 (36.47%), Postives = 100/170 (58.82%), Query Frame = 0
Query:  206 TQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERV-WAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
            TQAW+  MV+ + LCPFA  VV++ T+RY V  A  + D++   L++   LVETP+   +TT+V+ P   ++DF  F +     EA LE + ++ +  +A+FHP Y F G  ++ D  H+  R+PFP  +L+R + +  A A+    E+I +RN A L  +G + +  RF
Sbjct:   17 TQAWVEAMVVGLNLCPFAAPVVRNETIRYHVSEAGNEDDLLRDFLQQLSDLVETPQAELSTTLVITP-WLLQDFEEFLDLVADAEALLEQAGVEDLFQIASFHPGYLFEGVDAD-DLSHWTNRAPFPTLHLIRQDEMSRALASYADPEQIPERNIARLREMGREGLIARF 184          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|515926654|ref|WP_017357237.1| (hypothetical protein [Stenotrophomonas maltophilia])

HSP 1 Score: 103.99 bits (258), Expect = 1.411e-22
Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 0
Query:  184 SSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVE--DFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANEGLTEKIADRNEAALAAIGID 368
            +  SF  +++P G D   VIA T+ W+  +VI + LCPFA+ V   N VR+V+  A     ++  + EE   L +TP +   TT+++ PD   +  D++ F +     +A++EA DLQ ++ +A+FHPQY F  G++  D  ++  R+P+P  +LLR + V  A A     + I +RN   L  +G++
Sbjct:    2 NDDSFTDATAPDGPD---VIAETRTWLEQIVIGLNLCPFAKAVYVKNQVRFVLSDATTPEALVEQLAEELVLLRDTPAEQIDTTLIVHPDVLTDFLDYNDFLDNA---DAAIEALDLQGILQVASFHPQYQF-AGVAPDDVSNYTNRAPYPTLHLLREDSVERAVAAFPDPDVIVERNIETLDKLGVE 182          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|521961930|ref|WP_020473535.1| (DUF1415 domain-containing protein [Zavarzinella formosa])

HSP 1 Score: 103.605 bits (257), Expect = 1.616e-22
Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 0
Query:  197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVE--DFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEG-LTEKIADRNEAALAAIG 366
            MD A VI  T+ WI ++VI + LCPFA +V  DNT+RYVV  A  +  ++  +  E   L   P     TT+++ P  F +  D++ F +    L   LE    + V+ LA+FHPQY FGG   + D  +   RSP+P+ +LLR E +   A++    E I +RN   L  +G
Sbjct:    1 MDQATVIEETRRWIQSIVIGLNLCPFARRVFNDNTIRYVVSEATDEQSLLTDLATEMNNLATVPRTEVETTVLIHPAVFHDFLDYNDFLDPAEHL---LETLGHEGVLQLASFHPQYQFGGTKPD-DVENHTNRSPYPMLHLLREESITEIADDQEALEAIPERNIETLRKLG 169          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|857979753|emb|CEO94411.1| (hypothetical protein PBRA_000196 [Plasmodiophora brassicae])

HSP 1 Score: 103.219 bits (256), Expect = 3.549e-22
Identity = 56/173 (32.37%), Postives = 97/173 (56.07%), Query Frame = 0
Query:  202 VIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGL--TEKIADRNEAALAAIGIDEVRR 372
            V A   +WI+N+V++  LCPFA + V +  +R VV      S I +HV +E + + + P+D+  TTI++ P+     F+ +      +E  L+ +     V +A FHP Y F     + DP ++  RSPFP+ +LLR++ V+ YA   L   +++  RN+A +   G+++V+R
Sbjct:   18 VRAAVMSWINNVVVKNSLCPFARQAVDNGALRLVVSEETDASQIASHVFQECKRIQQLPDDIRETTIIVTPNGLSR-FAEYLACVNVIEKILDKTHYDEFVQVATFHPDYEFQDCEPD-DPANYTNRSPFPMIHLLRSKEVF-YAVHSLPDPDEVWQRNQAVMREKGLEQVQR 187          
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1086449931|emb|SDG35072.1| (hypothetical protein SAMN05216571_110101 [Halomonas taeanensis])

HSP 1 Score: 102.834 bits (255), Expect = 5.548e-22
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 0
Query:  203 IARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANEGLTEKIADRNEAALAAIG 366
            IA ++AW+  MV+   LCPFA + VQ +TVRYV V A   S+ +  +L E + L    ED +  T +L     V DF  + +     EA LE    + V  LA+FHP Y F  G++E DP ++  RSP+P+ +LLR + +  A ++    E I +RN AA+ A+G
Sbjct:   27 IAASRAWVETMVVGHNLCPFAGREVQRDTVRYVAVSAHDWSETLGALLAECQRL---DEDASLATTLLVLSDGVNDFDDYLDLLGVAEALLEEQGYEGVYQLASFHPDYCF-DGVAEDDPANYTNRSPWPMLHLLREDAIAEALSHYPDPEAIPERNAAAMTALG 187          
The following BLAST results are available for this feature:
BLAST of EWM29625.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112197|gb|EWM29625.1|0.000e+0100.00Protein of unknown function DUF1415 [Nannochlorops... [more]
gi|1094735521|emb|SEQ20378.1|2.036e-2537.22hypothetical protein SAMN03080615_00673 [Amphritea... [more]
gi|518451080|ref|WP_019621287.1|3.646e-2436.47hypothetical protein [Amphritea japonica][more]
gi|1054087042|ref|WP_066150926.1|1.390e-2338.95DUF1415 domain-containing protein [Hydrogenophaga ... [more]
gi|1054450495|ref|WP_066262145.1|1.011e-2237.79DUF1415 domain-containing protein [Hydrogenophaga ... [more]
gi|1090777373|emb|SEG83832.1|1.221e-2236.47hypothetical protein SAMN05444390_10634 [Marinobac... [more]
gi|515926654|ref|WP_017357237.1|1.411e-2233.51hypothetical protein [Stenotrophomonas maltophilia... [more]
gi|521961930|ref|WP_020473535.1|1.616e-2236.42DUF1415 domain-containing protein [Zavarzinella fo... [more]
gi|857979753|emb|CEO94411.1|3.549e-2232.37hypothetical protein PBRA_000196 [Plasmodiophora b... [more]
gi|1086449931|emb|SDG35072.1|5.548e-2238.18hypothetical protein SAMN05216571_110101 [Halomona... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1023rna1023Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications