EWM29625.1, cds1022 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|585112197|gb|EWM29625.1| (Protein of unknown function DUF1415 [Nannochloropsis gaditana]) HSP 1 Score: 823.157 bits (2125), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query: 1 MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV 398
MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV
Sbjct: 1 MICMKPGLLKTNFIFEASFSKTMKDHYGVRIKSCCEKVLNMASNRISSLRLVCCLLAGDCATGHYGRMWFMFKCNEWRSMIHIHSLCSVDTPRTGACMPWSNRRSPTSTVLRFGLSLVLLRGPSGFSTRRSPYARTNEINSLPGRRFCSTTRPRGFTHTIALSPIGLSPLPSKIVALPASSSTSSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVERYNGGKEYGVSEGSGV 398
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1094735521|emb|SEQ20378.1| (hypothetical protein SAMN03080615_00673 [Amphritea atlantica]) HSP 1 Score: 111.694 bits (278), Expect = 2.036e-25 Identity = 67/180 (37.22%), Postives = 100/180 (55.56%), Query Frame = 0
Query: 196 GMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLR-AERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
G A V T+ W+ MV+ + LCPFA VV+DNT+RY V A+ ++A L E L+ E +TT+ + PD ++DF + + R E LE + L+ V+ LA+FHP Y F G+ E D H+ RSP+P F+++R AE A + E+I +RN L +G + + RRF
Sbjct: 7 GYSPAEVEKITREWVETMVVGLNLCPFAAPVVRDNTLRYAVTTAQEGESLVAAFLAEIELLLAADEKTVSTTLFIVPDG-LQDFYDYLDHLRLFEELLEQAGLEGVLQLASFHPAYRF-EGVPEDDLSHWSNRSPWPAFHIIREAEMGRALTHYANPEQIPERNIKLLRELGREGLIRRF 184
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|518451080|ref|WP_019621287.1| (hypothetical protein [Amphritea japonica]) HSP 1 Score: 108.227 bits (269), Expect = 3.646e-24 Identity = 62/170 (36.47%), Postives = 97/170 (57.06%), Query Frame = 0
Query: 206 TQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLR-AERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
T+ W+ MV+ + LCPFA VV+DN++RY + AR ++A + E L+ E +TT+ + P +EDF + + R E LE + L+ V+ LA+FHP Y F G++E D H+ RSP+PVF+++R AE A + E+I +RN L +G + + RF
Sbjct: 17 TRQWVETMVVGLNLCPFAAPVVKDNSLRYAITDARGSESLVAAFMAEIEQLLAASEKEISTTLFIVPTG-LEDFYDYLDHLRLFEELLEQAGLEGVIQLASFHPGYLF-HGVAEDDLSHWSNRSPWPVFHIIREAEMSRALTHYSNPEQIPERNIKRLRELGREALIERF 184
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1054087042|ref|WP_066150926.1| (DUF1415 domain-containing protein [Hydrogenophaga pseudoflava]) HSP 1 Score: 106.301 bits (264), Expect = 1.390e-23 Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 0
Query: 197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANE-GLTEKIADRNEAALAAIG 366
M D V+A T+ WI VI + LCPFA V N VR VV RAR + + E LV TP + TT+++ P F DF F + ++ + +L+ V+ +A FHPQ+ F G ++ DP HF R+P+P +LLR + V A A+E G EKI +RN A L +G
Sbjct: 1 MTDEQVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHLDAFLDELDRELDLLVNTPAEEIDTTLLVHPTLF-PDFEVFNDFMNVVDDVVAEHELEGVIQVANFHPQFLFDGEAAD-DPSHFTNRAPYPTLHLLREDSVERAVASEGGDAEKIVERNIATLRTLG 170
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1054450495|ref|WP_066262145.1| (DUF1415 domain-containing protein [Hydrogenophaga flava]) HSP 1 Score: 103.99 bits (258), Expect = 1.011e-22 Identity = 65/172 (37.79%), Postives = 92/172 (53.49%), Query Frame = 0
Query: 197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW--AYANEGLTEKIADRNEAALAAIG 366
+ D V+A T+ WI VI + LCPFA V N VR VV RAR + + E LV TP D TT+++ P F DF F + ++ + +L+ VV +A FHP+Y F G ++ D HF R+P+P +LLR + V ++ G EKI +RN A L A+G
Sbjct: 3 LSDDTVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHLDAFLDELDRELDLLVNTPADEIDTTLLVHPTLF-PDFEVFNDFMNVVDDVVAEHELEGVVQVANFHPEYLFEGEAAD-DASHFTNRAPYPTLHLLREDSVERAVESDGGDAEKIVERNIATLRALG 172
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1090777373|emb|SEG83832.1| (hypothetical protein SAMN05444390_10634 [Marinobacterium lutimaris]) HSP 1 Score: 104.375 bits (259), Expect = 1.221e-22 Identity = 62/170 (36.47%), Postives = 100/170 (58.82%), Query Frame = 0
Query: 206 TQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERV-WAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
TQAW+ MV+ + LCPFA VV++ T+RY V A + D++ L++ LVETP+ +TT+V+ P ++DF F + EA LE + ++ + +A+FHP Y F G ++ D H+ R+PFP +L+R + + A A+ E+I +RN A L +G + + RF
Sbjct: 17 TQAWVEAMVVGLNLCPFAAPVVRNETIRYHVSEAGNEDDLLRDFLQQLSDLVETPQAELSTTLVITP-WLLQDFEEFLDLVADAEALLEQAGVEDLFQIASFHPGYLFEGVDAD-DLSHWTNRAPFPTLHLIRQDEMSRALASYADPEQIPERNIARLREMGREGLIARF 184
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|515926654|ref|WP_017357237.1| (hypothetical protein [Stenotrophomonas maltophilia]) HSP 1 Score: 103.99 bits (258), Expect = 1.411e-22 Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 0
Query: 184 SSSSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVE--DFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANEGLTEKIADRNEAALAAIGID 368
+ SF +++P G D VIA T+ W+ +VI + LCPFA+ V N VR+V+ A ++ + EE L +TP + TT+++ PD + D++ F + +A++EA DLQ ++ +A+FHPQY F G++ D ++ R+P+P +LLR + V A A + I +RN L +G++
Sbjct: 2 NDDSFTDATAPDGPD---VIAETRTWLEQIVIGLNLCPFAKAVYVKNQVRFVLSDATTPEALVEQLAEELVLLRDTPAEQIDTTLIVHPDVLTDFLDYNDFLDNA---DAAIEALDLQGILQVASFHPQYQF-AGVAPDDVSNYTNRAPYPTLHLLREDSVERAVAAFPDPDVIVERNIETLDKLGVE 182
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|521961930|ref|WP_020473535.1| (DUF1415 domain-containing protein [Zavarzinella formosa]) HSP 1 Score: 103.605 bits (257), Expect = 1.616e-22 Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 197 MDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVE--DFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEG-LTEKIADRNEAALAAIG 366
MD A VI T+ WI ++VI + LCPFA +V DNT+RYVV A + ++ + E L P TT+++ P F + D++ F + L LE + V+ LA+FHPQY FGG + D + RSP+P+ +LLR E + A++ E I +RN L +G
Sbjct: 1 MDQATVIEETRRWIQSIVIGLNLCPFARRVFNDNTIRYVVSEATDEQSLLTDLATEMNNLATVPRTEVETTVLIHPAVFHDFLDYNDFLDPAEHL---LETLGHEGVLQLASFHPQYQFGGTKPD-DVENHTNRSPYPMLHLLREESITEIADDQEALEAIPERNIETLRKLG 169
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|857979753|emb|CEO94411.1| (hypothetical protein PBRA_000196 [Plasmodiophora brassicae]) HSP 1 Score: 103.219 bits (256), Expect = 3.549e-22 Identity = 56/173 (32.37%), Postives = 97/173 (56.07%), Query Frame = 0
Query: 202 VIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGL--TEKIADRNEAALAAIGIDEVRR 372
V A +WI+N+V++ LCPFA + V + +R VV S I +HV +E + + + P+D+ TTI++ P+ F+ + +E L+ + V +A FHP Y F + DP ++ RSPFP+ +LLR++ V+ YA L +++ RN+A + G+++V+R
Sbjct: 18 VRAAVMSWINNVVVKNSLCPFARQAVDNGALRLVVSEETDASQIASHVFQECKRIQQLPDDIRETTIIVTPNGLSR-FAEYLACVNVIEKILDKTHYDEFVQVATFHPDYEFQDCEPD-DPANYTNRSPFPMIHLLRSKEVF-YAVHSLPDPDEVWQRNQAVMREKGLEQVQR 187
BLAST of EWM29625.1 vs. NCBI_GenBank
Match: gi|1086449931|emb|SDG35072.1| (hypothetical protein SAMN05216571_110101 [Halomonas taeanensis]) HSP 1 Score: 102.834 bits (255), Expect = 5.548e-22 Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 0
Query: 203 IARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVW-AYANEGLTEKIADRNEAALAAIG 366
IA ++AW+ MV+ LCPFA + VQ +TVRYV V A S+ + +L E + L ED + T +L V DF + + EA LE + V LA+FHP Y F G++E DP ++ RSP+P+ +LLR + + A ++ E I +RN AA+ A+G
Sbjct: 27 IAASRAWVETMVVGHNLCPFAGREVQRDTVRYVAVSAHDWSETLGALLAECQRL---DEDASLATTLLVLSDGVNDFDDYLDLLGVAEALLEEQGYEGVYQLASFHPDYCF-DGVAEDDPANYTNRSPWPMLHLLREDAIAEALSHYPDPEAIPERNAAAMTALG 187 The following BLAST results are available for this feature:
BLAST of EWM29625.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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