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Properties
| Property Name | Value |
|---|
| Product | na p-type atpase |
| Orig transcript id | gnl|cribi|Naga_100574g1.8360.mrna |
| Orig protein id | gnl|cribi|Naga_100574g1.8360 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037266.1 | supercontig | KK037266.1:52369..54503 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10223 ID=rna10223|Name=rna10223|organism=Nannochloropsis gaditana|type=mRNA|length=807bp
ATGTCTCCTACCGCTGATCCAACCCCTGATGCATCGACGACAGCTCCTAG
TCCACGACCAACCGTGACTCCGGCCCTGACTCCTACCAAACAACCCACAG
TAGGTCCAACGGTGGCTCCCACAATGCAGCCGACGGTAGCCCCAACCATG
GCACCTACAATACAGCCAACGGCAGCTCAGACGGTGGCCCCCACAATGCA
GCCGACGGTTGCCCCAACCATGGCGCCTACAATGCAGCCCACGGCAGCCC
CGACGGTGGCACCTACGATGCAGCCGACTGCAGCTCCAACCATGGTTCCT
GCGATGCAGCCCACGGCAGCTCCAACCATGGTACCTACGATGCAGCCGAC
GGCAGCTCCGACGATGGTACCTACGATGCAGCCGACGGCAGCCCCAACCA
TGGCACCTACGATGCAGCCGACGGCAGCTCCAACCATGGCACCTACAATG
CAGCCCACGGCAGCTCCAACCATGGTACCTACGATGCAGCCAACCGCAGC
TCCGACGGTGGCTCCCACAATTCAGCCCACGGCAGCCCCGACCATGGTAC
CTACAATGCAGCCGACGGCAGCTCCAACCATGGTACCTACGATGCAGCCG
ACGGCAGCTCCAACCATGGTACCTACGATGCAGCCAACGGCAGCTCCGAC
GGTGGCTCCCACAATGCAGCCGACGGCAGCTCCAACCATGGCACCTACGA
TGCGGCCGACGGCAGCTCCGACCATGGTACCTACGATGCGGCCGACGGCA
TTTCCTACCATGGCACCCACTTTGCTACCCACTGAACCTCCCTCATCAGA
TACCTGA back to topprotein sequence of rna10223 >rna10223-protein ID=rna10223-protein|Name=rna10223|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
MVESFFPPPDPFDLGQTEYQRTNMGSGTNSQGSVAKFDIEKGVNHDGAGK
EDLAVAVHSGPVEEFMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHH
FGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIG
FIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSEEDE back to topmRNA from alignment at KK037266.1:52369..54503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10223 ID=rna10223|Name=rna10223|organism=Nannochloropsis gaditana|type=mRNA|length=2135bp|location=Sequence derived from alignment at KK037266.1:52369..54503+ (Nannochloropsis gaditana)
TCAGTACCTTTCGTGTCTAGATCGCGATATGACGTTTTTCAGGTTCATTG
TTCCGTCGGACGCGGATCCCAGGTTAGTGTTCTCTAGATGTATACGCCAG
ACAATAAGAAATTATGCGTGACAAGGTTTTTCCTAGCTGCACGCAATTCA
TGGTCATCTCCAAAGGTCGAAAATACTCAGTAGGTTGATCTCGAATTAAG
CTCTTTCCAAGAAGGCTGCCCATGCTCAGTCCGATAAATGCTACGACATT
TTATAAAATCCATGCCGGACGCCACATCTCCATCCTTACATCTATCTGTA
CGTTATTCGTAGAATCCAACAACTGGTTTATGCAGGGTTCTGACCTTCTT
TTGGCAACAATAGGCAGCGAGGGATGAGGATCGTCGGTGACTGTCGCCAA
GTCCAATATTTAACACCTTTTTCGTTATTCTTTCGTACTTTTGCGTGGTT
TTCCTTGCCCTTGCACGCGTCAACTCGACAATATCTTCTTCGCGTCTGAG
GATTCAATCACTGTTGCATTGAAGGGTCTATGGGGGATGGATGGGATAGT
TCAGTGGTTTACTTTCCAGAGGCTATCACCATCATGGTTCTTGAGAGTCA
GGTTGTGGATTACAATTATTTCCGAGAGTATCGAAGAGAGTGCCTTATCA
GGGATCAGTAGTCTCTATTCCTGCTTTTGTGGAGATCTGTGCACATTTCT
GTCGTCATGACCATGTCCAAAGCATACATTAGTTTCTTTGGAGGTATTTT
TGGGTTAGGACGGGGGAGtcaacctccttcccgtgGCACGTCCGATCCCC
AGATTCTTTGACAAGAGAAAACACTTGCCCGGCCTCACGACCATGGTCGA
AAGCTTTTTCCCACCACCAGACCCTTTTGACCTTGGACAGACGGAATACC
AGCGGACCAACATGGGGAGTGGGACCAATTCTCAAGGAAGTGTGGCCAAG
TTTGACATTGAAAAGGGCGTCAATCATGACGGCGCTGGGAAAGAGGACCT
GGCCGTCGCGGTGCATTCCGGCCCCGTGGAAGAATTCATGGAGATGCCAT
ACAATGCCACGAATGCCGAAGTGTTGGCGCATTATCAGGTAAGGATGCCA
GATGAAAAAGAAGGTGATGGCTTTGGTTGTTGCCGCGTGATGATGTTGCG
AGGCACATATTTGTCCGATGATCACAGGATTAGGGTTgctccccccatcc
cctctccgGCAAATGTTTTCTTTCTGATTCTGACCTTTTCCAATGGAGCA
TTCGATCCGTTTCTGATGTTTCTCTCCCAAGGGGTGGATTCCATACACAC
TGTTGGCTAACTAATCgcgttaacctccccccctgacctcttgtcctcct
tcacctgtGATCTcatccctccacctctctaCAGCACACATTGTCACAtt
gtcttttcttctcctcacAGCTATGGAATCACTTCCGTTGCATCACTGCC
TTTTACCTCTcacaacctccccttcccccccccctcctccctcctcgtcg
gcccAGGCCGACCCCGCCACGGGGCTCTCGCACGCGGAGGTCGAGACCCG
TCGGCATCATTTCGGTCGGAACGCCTTGAAAGGCCGACGCTCGGTTCACC
CCCtcgtcttgctcctccaacacctcCTGAATGTGATGTCCTTGATCCTT
TTTGTGgccgtcgccctcgccttggCGGTGCAGGAGTGGATCGAGGCAGG
GGTGATTGGCTTCATCATCGTCTTGAACACCGTCGTTGGTTTCGCCCAGG
TAGATagatgaggatggaaaggatgaaaaaaaaagaagatgtcggggggg
aggctgaaCTTCTCTATATTTCCCATTGTCATGCATTCTATGTGTGTACT
CCTGTCTCGTgatgtcttcctcttcctccctccctccctccctccctccc
tccctccctccctccctccctccttccttcaggAGTATAGTTCAGAGAAG
ACCATGCAGGCCTTACGACGACTGAGTTCCCCCTTGGCGCGCGTGATCCG
AGAAGGGCGatcggaggaggtggggtgggagggagggtgggagggagggt
gggaggtagggagggaggaagggagggggagaggaagggagggaatgaag
gaaAAACGTTGGGGAGGCTCTGGAAGGATGAATAG back to topCoding sequence (CDS) from alignment at KK037266.1:52369..54503+ >rna10223 ID=rna10223|Name=rna10223|organism=Nannochloropsis gaditana|type=CDS|length=2340bp|location=Sequence derived from alignment at KK037266.1:52369..54503+ (Nannochloropsis gaditana)
ATGGTCGAAAGCTTTTTCCCACCACCAGACCCTTTTGACCTTGGACAGAC
GGAATACCAGCGGACCAACATGGGGAGTGGGACCAATTCTCAAGGAAGTG
TGGCCAAGTTTGACATTGAAAAGGGCGTCAATCATGACGGCGCTGGGAAA
GAGGACCTGGCCGTCGCGGTGCATTCCGGCCCCGTGGAAGAATTCATGGA
GATGCCATACAATGCCACGAATGCCGAAGTGTTGGCGCATTATCAGGCCG
ACCCCGCCACGGGGCTCTCGCACGCGGAGGTCGAGACCCGTCGGCATCAT
TTCGGTCGGAACGCCTTGAAAGGCCGACGCTCGGTTCACCCCCtcgtctt
gctcctccaacacctcCTGAATGTGATGTCCTTGATCCTTTTTGTGgccg
tcgccctcgccttggCGGTGCAGGAGTGGATCGAGGCAGGGGTGATTGGC
TTCATCATCGTCTTGAACACCGTCGTTGGTTTCGCCCAGgAGTATAGTTC
AGAGAAGACCATGCAGGCCTTACGACGACTGAGTTCCCCCTTGGCGCGCG
TGATCCGAGAAGGGCGatcggaggagGATGAATAGATGGTCGAAAGCTTT
TTCCCACCACCAGACCCTTTTGACCTTGGACAGACGGAATACCAGCGGAC
CAACATGGGGAGTGGGACCAATTCTCAAGGAAGTGTGGCCAAGTTTGACA
TTGAAAAGGGCGTCAATCATGACGGCGCTGGGAAAGAGGACCTGGCCGTC
GCGGTGCATTCCGGCCCCGTGGAAGAATTCATGGAGATGCCATACAATGC
CACGAATGCCGAAGTGTTGGCGCATTATCAGGCCGACCCCGCCACGGGGC
TCTCGCACGCGGAGGTCGAGACCCGTCGGCATCATTTCGGTCGGAACGCC
TTGAAAGGCCGACGCTCGGTTCACCCCCtcgtcttgctcctccaacacct
cCTGAATGTGATGTCCTTGATCCTTTTTGTGgccgtcgccctcgccttgg
CGGTGCAGGAGTGGATCGAGGCAGGGGTGATTGGCTTCATCATCGTCTTG
AACACCGTCGTTGGTTTCGCCCAGgAGTATAGTTCAGAGAAGACCATGCA
GGCCTTACGACGACTGAGTTCCCCCTTGGCGCGCGTGATCCGAGAAGGGC
GatcggaggagGATGAATAGATGGTCGAAAGCTTTTTCCCACCACCAGAC
CCTTTTGACCTTGGACAGACGGAATACCAGCGGACCAACATGGGGAGTGG
GACCAATTCTCAAGGAAGTGTGGCCAAGTTTGACATTGAAAAGGGCGTCA
ATCATGACGGCGCTGGGAAAGAGGACCTGGCCGTCGCGGTGCATTCCGGC
CCCGTGGAAGAATTCATGGAGATGCCATACAATGCCACGAATGCCGAAGT
GTTGGCGCATTATCAGGCCGACCCCGCCACGGGGCTCTCGCACGCGGAGG
TCGAGACCCGTCGGCATCATTTCGGTCGGAACGCCTTGAAAGGCCGACGC
TCGGTTCACCCCCtcgtcttgctcctccaacacctcCTGAATGTGATGTC
CTTGATCCTTTTTGTGgccgtcgccctcgccttggCGGTGCAGGAGTGGA
TCGAGGCAGGGGTGATTGGCTTCATCATCGTCTTGAACACCGTCGTTGGT
TTCGCCCAGgAGTATAGTTCAGAGAAGACCATGCAGGCCTTACGACGACT
GAGTTCCCCCTTGGCGCGCGTGATCCGAGAAGGGCGatcggaggagGATG
AATAGATGGTCGAAAGCTTTTTCCCACCACCAGACCCTTTTGACCTTGGA
CAGACGGAATACCAGCGGACCAACATGGGGAGTGGGACCAATTCTCAAGG
AAGTGTGGCCAAGTTTGACATTGAAAAGGGCGTCAATCATGACGGCGCTG
GGAAAGAGGACCTGGCCGTCGCGGTGCATTCCGGCCCCGTGGAAGAATTC
ATGGAGATGCCATACAATGCCACGAATGCCGAAGTGTTGGCGCATTATCA
GGCCGACCCCGCCACGGGGCTCTCGCACGCGGAGGTCGAGACCCGTCGGC
ATCATTTCGGTCGGAACGCCTTGAAAGGCCGACGCTCGGTTCACCCCCtc
gtcttgctcctccaacacctcCTGAATGTGATGTCCTTGATCCTTTTTGT
GgccgtcgccctcgccttggCGGTGCAGGAGTGGATCGAGGCAGGGGTGA
TTGGCTTCATCATCGTCTTGAACACCGTCGTTGGTTTCGCCCAGgAGTAT
AGTTCAGAGAAGACCATGCAGGCCTTACGACGACTGAGTTCCCCCTTGGC
GCGCGTGATCCGAGAAGGGCGatcggaggagGATGAATAG back to top
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