EWM20481.1, cds10192 (CDS) Nannochloropsis gaditana

Overview
NameEWM20481.1
Unique Namecds10192
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037266.1:53211..53456 +
Alignment locationKK037266.1:53875..54117 +
Alignment locationKK037266.1:54301..54387 +
Alignment locationKK037266.1:54495..54503 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20481.1
Productna p-type atpase
Orig transcript idgnl|cribi|Naga_100574g1.8360.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:53211..53456 +
KK037266.1supercontigKK037266.1:53875..54117 +
KK037266.1supercontigKK037266.1:54301..54387 +
KK037266.1supercontigKK037266.1:54495..54503 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR023298ATPase_P-typ_TM_dom
IPR008250ATPase_P-typ_transduc_dom_A
IPR004014ATPase_P-typ_cation-transptr_N
Homology
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|585100139|gb|EWM20481.1| (na p-type atpase [Nannochloropsis gaditana])

HSP 1 Score: 398.667 bits (1023), Expect = 1.303e-140
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
Query:    1 MVESFFPPPDPFDLGQTEYQRTNMGSGTNSQGSVAKFDIEKGVNHDGAGKEDLAVAVHSGPVEEFMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSEEDE 194
            MVESFFPPPDPFDLGQTEYQRTNMGSGTNSQGSVAKFDIEKGVNHDGAGKEDLAVAVHSGPVEEFMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSEEDE
Sbjct:    1 MVESFFPPPDPFDLGQTEYQRTNMGSGTNSQGSVAKFDIEKGVNHDGAGKEDLAVAVHSGPVEEFMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSEEDE 194          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|585106841|gb|EWM25181.1| (na p-type atpase, partial [Nannochloropsis gaditana])

HSP 1 Score: 141.739 bits (356), Expect = 3.569e-36
Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 0
Query:   65 FMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREG 188
             M  PY     +V+A Y+A+   GL+  E + RR   G+N LKGRRS+HP+ L + HL N M+LILF+A ALALAV E++ A V+G +I++N V+GF Q YSSEKT++ALRRLSSP ARV+R+G
Sbjct:   97 LMAAPYMIKGDDVVAFYKANLQEGLTSQEADRRRGLCGKNTLKGRRSLHPIFLFIHHLFNFMTLILFIAFALALAVSEYLMASVLGVVILVNAVIGFTQAYSSEKTIKALRRLSSPNARVLRDG 220          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|671684978|emb|CDS13995.1| (hypothetical protein LRAMOSA06166 [Lichtheimia ramosa])

HSP 1 Score: 118.242 bits (295), Expect = 1.625e-29
Identity = 56/123 (45.53%), Postives = 84/123 (68.29%), Query Frame = 0
Query:   69 PYNATNAEVLAHY-QADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRS 190
            PY+  + + +A   ++D   GLS  EV+ RR   G N ++G   ++P+ LLL+   N+M LIL VA+ ++   ++W+EAGVIG I++LN  VGFAQEY +EKTM +LR+++SP A+VIR G S
Sbjct:   87 PYHTMDLDTVATLLKSDLMDGLSEEEVQRRRLESGYNEMEGEGGINPVKLLLKQFFNIMVLILLVAMVVSFVFKDWVEAGVIGVIMLLNAGVGFAQEYKAEKTMDSLRQMASPTAQVIRNGES 209          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|661182397|emb|CDH55028.1| (na p-type atpase [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 121.324 bits (303), Expect = 2.066e-28
Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 0
Query:   69 PYNATNAEVLAHY-QADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRS 190
            PY+  + E +A   ++D   GLS  EVE+RR   G N ++G   V+P+ LLL+   N+M LIL VA+ ++   ++W+EAGVIG I++LN  VGFAQEY +EKTM +LR+++SP A+VIR G S
Sbjct:   88 PYHTMDLETVATLLKSDLVDGLSEKEVESRRLESGYNEMEGEGGVNPVKLLLKQFFNIMVLILLVAMVVSFVFKDWVEAGVIGVIMLLNAGVGFAQEYKAEKTMDSLRQMASPTAQVIRNGES 210          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|1128261759|gb|OLN89647.1| (Sodium transport ATPase 5-like protein 3 [Colletotrichum chlorophyti])

HSP 1 Score: 120.939 bits (302), Expect = 2.568e-28
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0
Query:   59 SGPVEEFMEMPYNA-TNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSE 191
            SG     M  P +  T AEV+   +ADP+ GLS+ E   R   +G+N L   + V PL +L+  + N M+L+L +A+A++  ++ WIE GV+  +I+LN VVGF QEYS+EKTM +LR LSSP ARVIR+G+S+
Sbjct:   16 SGQSNRPMTQPAHCLTLAEVVDELKADPSIGLSNDEAGRRLAEYGKNDLGEAQRVSPLRILIAQVANAMTLVLILAMAVSFGIESWIEGGVVAGVILLNIVVGFFQEYSAEKTMDSLRSLSSPTARVIRDGQSQ 149          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|296416776|ref|XP_002838050.1| (hypothetical protein [Tuber melanosporum Mel28] >gi|295633946|emb|CAZ82241.1| unnamed protein product [Tuber melanosporum])

HSP 1 Score: 116.701 bits (291), Expect = 3.055e-28
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   60 GPVEEFMEM-PYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSE 191
            GPV   +   PY  +  +VL     DP  GLS AE   R   FG N L     V  + +LL+ L N M L+L +A+ ++ A+Q WIEA VI  ++++N +VGF QEYS+EKTM +LR LSSP A VIR G+S+
Sbjct:   15 GPVHNGLSNDPYLLSGDQVLRQLSTDPDDGLSDAEAGARMTKFGLNELDTGAGVSVVRILLRQLFNAMGLVLIMAMVVSFAIQSWIEAAVITAVVIVNIIVGFLQEYSAEKTMDSLRSLSSPTASVIRSGQSK 147          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|818157217|gb|KKO98187.1| (potassium/sodium efflux P-type ATPase, fungal-type [Trichoderma harzianum])

HSP 1 Score: 120.553 bits (301), Expect = 4.595e-28
Identity = 69/187 (36.90%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    5 FFPPPDPFDLGQTEYQRTNMGSGTNSQGSVAKFDIEKGVNH-DGAGKEDLAVAVHSGPVEEFMEMPYNATNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRS 190
            FF PP  F L Q  +        T S+ S+A+    K V H  G   E ++   H+ P+++            V+    A+ + GL  AE  TR   +G+N L       P+ +++  + N M+L+L +A+A++  ++ +IE GVI F+I+LN VVGF QEYS+EKTM +LR LSSP A VIR+G S
Sbjct:   15 FFQPPGLFTLDQVHF--------TYSRDSIAQLPSFKAVAHASGQSNEPMSKPAHALPIQQ------------VVNELGANISDGLPEAEASTRLQKYGKNDLGEAEGAQPIKIIIAQIANAMTLVLILAMAVSFGIKSYIEGGVITFVILLNVVVGFFQEYSAEKTMDSLRSLSSPTATVIRDGDS 181          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|685856647|ref|XP_009255356.1| (hypothetical protein FPSE_03963 [Fusarium pseudograminearum CS3096] >gi|408396628|gb|EKJ75783.1| hypothetical protein FPSE_03963 [Fusarium pseudograminearum CS3096])

HSP 1 Score: 119.398 bits (298), Expect = 9.088e-28
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   49 GKEDLAVAVH-SGPVEEFMEMPYNA-TNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSE 191
             K+D AV  H SG   E M  P +A T  +V+   Q D   GL+ AE ++R   FG N L     V PL ++L  + N M+L+L +A+A++  ++ WIE GV+ FII LN  VGF QEYS+EKTM +LR +SSP A V+R+G ++
Sbjct:    2 AKQDDAVDNHVSGQSNEPMSRPAHALTFDQVVEELQTDAMHGLTSAEAKSRHEKFGNNDLGDADGVQPLKIILAQVANAMTLVLILAMAVSFGIKSWIEGGVVAFIIGLNVTVGFFQEYSAEKTMDSLRNMSSPTASVVRDGDAK 146          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|758202060|ref|XP_011323390.1| (calcium-transporting ATPase 3 [Fusarium graminearum PH-1] >gi|558860731|gb|ESU10814.1| calcium-transporting ATPase 3 [Fusarium graminearum PH-1] >gi|699034357|emb|CEF87890.1| unnamed protein product [Fusarium graminearum])

HSP 1 Score: 119.398 bits (298), Expect = 9.446e-28
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   49 GKEDLAVAVH-SGPVEEFMEMPYNA-TNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSE 191
             K+D AV  H SG   E M  P +A T  +V+   Q D   GL+ AE ++R   FG N L     V PL ++L  + N M+L+L +A+A++  ++ WIE GV+ FII LN  VGF QEYS+EKTM +LR +SSP A V+R+G ++
Sbjct:    2 AKQDDAVDNHVSGQSNEPMSRPAHALTFDQVVEELQTDAMHGLTSAEAKSRHEKFGNNDLGDADGVQPLKIILAQVANAMTLVLILAMAVSFGIKSWIEGGVVAFIIGLNVTVGFFQEYSAEKTMDSLRNMSSPTASVVRDGDAK 146          
BLAST of EWM20481.1 vs. NCBI_GenBank
Match: gi|596549524|gb|EYB29173.1| (hypothetical protein FG05_04919 [Fusarium graminearum])

HSP 1 Score: 119.398 bits (298), Expect = 9.537e-28
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   49 GKEDLAVAVH-SGPVEEFMEMPYNA-TNAEVLAHYQADPATGLSHAEVETRRHHFGRNALKGRRSVHPLVLLLQHLLNVMSLILFVAVALALAVQEWIEAGVIGFIIVLNTVVGFAQEYSSEKTMQALRRLSSPLARVIREGRSE 191
             K+D AV  H SG   E M  P +A T  +V+   Q D   GL+ AE ++R   FG N L     V PL ++L  + N M+L+L +A+A++  ++ WIE GV+ FII LN  VGF QEYS+EKTM +LR +SSP A V+R+G ++
Sbjct:    2 AKQDDAVDNHVSGQSNEPMSRPAHALTFDQVVEELQTDAMHGLTSAEAKSRHEKFGNNDLGDADGVQPLKIILAQVANAMTLVLILAMAVSFGIKSWIEGGVVAFIIGLNVTVGFFQEYSAEKTMDSLRNMSSPTASVVRDGDAK 146          
The following BLAST results are available for this feature:
BLAST of EWM20481.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100139|gb|EWM20481.1|1.303e-140100.00na p-type atpase [Nannochloropsis gaditana][more]
gi|585106841|gb|EWM25181.1|3.569e-3654.03na p-type atpase, partial [Nannochloropsis gaditan... [more]
gi|671684978|emb|CDS13995.1|1.625e-2945.53hypothetical protein LRAMOSA06166 [Lichtheimia ram... [more]
gi|661182397|emb|CDH55028.1|2.066e-2847.97na p-type atpase [Lichtheimia corymbifera JMRC:FSU... [more]
gi|1128261759|gb|OLN89647.1|2.568e-2846.27Sodium transport ATPase 5-like protein 3 [Colletot... [more]
gi|296416776|ref|XP_002838050.1|3.055e-2845.11hypothetical protein [Tuber melanosporum Mel28] >g... [more]
gi|818157217|gb|KKO98187.1|4.595e-2836.90potassium/sodium efflux P-type ATPase, fungal-type... [more]
gi|685856647|ref|XP_009255356.1|9.088e-2844.14hypothetical protein FPSE_03963 [Fusarium pseudogr... [more]
gi|758202060|ref|XP_011323390.1|9.446e-2844.14calcium-transporting ATPase 3 [Fusarium graminearu... [more]
gi|596549524|gb|EYB29173.1|9.537e-2844.14hypothetical protein FG05_04919 [Fusarium graminea... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10223rna10223Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications