rna10218, rna10218 (mRNA) Nannochloropsis gaditana

Overview
Namerna10218
Unique Namerna10218
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length354
Alignment locationKK037266.1:40134..42224 -

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Properties
Property NameValue
Productwd repeat-containing protein 92
Orig transcript idgnl|cribi|Naga_100452g1.10233.mrna
Orig protein idgnl|cribi|Naga_100452g1.10233
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:40134..42224 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100452g1gene9922Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10218rna10218-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20487.1cds10187Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10218 ID=rna10218|Name=rna10218|organism=Nannochloropsis gaditana|type=mRNA|length=354bp
ATGACACCTGCTGCCCGGCCTACCGCCGAGCCTACTGTGACTCCCACCAT
GACACCTGCTGCCCGGCCTACCGCCGAGCCTACTGCGACTCCTACCATGA
CTCCCGCCGCCCAGCCTACTGCAGGTCCCACTATGACACCTACCGCCGAG
CCTACGGCAGGTCCTACCATGACTCCCACAGCCCAGCCTACCGCGACTCC
CACTATGACACCTACCGCCGAGCCTACTGCAGCTCCTACTATGACTCCCA
CAGCCCAGCCTACCGCGACTCCCACCATGACACCTACCGCCGAGCCTACT
GCAGCTCCTACTATGACTCCTACAGCCCAGCCTACTGCGGCTCCCACCAA
GTAA
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protein sequence of rna10218

>rna10218-protein ID=rna10218-protein|Name=rna10218|organism=Nannochloropsis gaditana|type=polypeptide|length=232bp
MLPPFPPPSFSPSCLPPLFLSPFSPCNASNDSERVVAAGYDNGDVKLFDL
RTSSLRHENNVGNGVTSLEFDRWDIPMNKLVITMLESSFLLWRLRGRDSS
ETMEGRVAGTEDKPEGGVVFSIKQKTHHNATVWSARHLPQNRDVFVTCGG
EGGLALWQYHYATPSSSSSPSTTTPSSTSGPDPGALSLLNARLLSPQPLV
AFDWHREKTGLCAIASLDQCLRVHLVTRLATL
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mRNA from alignment at KK037266.1:40134..42224-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10218 ID=rna10218|Name=rna10218|organism=Nannochloropsis gaditana|type=mRNA|length=2091bp|location=Sequence derived from alignment at KK037266.1:40134..42224- (Nannochloropsis gaditana)
ATGCTTCCTCCCTTCCCACCTCCCTCCTTCTCTCCCTCCTGCCTGCCTCC TCTCTTTCTTTCCCCTTTTTCCCCTTGTCTTTTCTTTCCCTCACGCTTCC TCCCTTCCCACCCACCTCCTTTCCTCCCTCCTTCCCTCCCTCCCCTGCCT CCTTTCTCTTTCTCCCCCCTTTTTTCCCCTTGTCTTTTCCTTCCCTCATG CTTCCTCCCTTCTCACCTCCCTCCTTCCCTCTCTCCTTCCCTCCCTCCCT CCAGGCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGA CAACGGCGACGTCAAGCTCTTCGGTGGGTTCCTCCATCCCAACCATCCTT CCTTTGTCTTCTTCCATCCCAACCGTTCCCAATGACCTCCACCCCGTCGC GGTTGTTCTTTCGCGGATTTTTTGTTCCTTTTCTCTCCACACTGGTATGG TCCTGCGTGCGATCCCCACAAACTCGTCCTCACAGCGTCTCGACTCCTCC CTTCCCGCCCTCCCCGCCCCTCCTTCCCCGCTCTCATTCTTATACCCTGT CCTTTCCCTGTTCAGACCTCCGCACGAGCAGTCTACGTCATGAAAACAAC GTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGATGGGTGCGTCCTGC CCTCCCTCCCTCCCTCCTTCCCTCCCTTCTTCCCTCCCTCCCTCCTTCCC GGCCTCTCTCTTTCCTTTCTCTTTCCCGCCGGTCCACTCTCTTCCCTCAC CCAAGAGTTTGAGTATCATACTACTCAGAATCAACCCTTGGCAACCCCAC GTCCAGCTTCTTCTTTTCTTTCCCTCTGTTCAGTCCCTTGTCACGTGCCC GCTCACTCTTTCTCCCCTCTTCTTTCGCCCTCCTTCTCCCTAACACACTC CTGGGAATAAGCACTTTCTCCTCTCTTGTTTCTTCCTCCTTCTCCCAGGA CATTCCTATGAATAAGCTCGTCATCACCATGCTGGAATCCTCATTCCTCC TTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATGGAAGGCAGGGTA GCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTTCTCGATCAAGCA GAAGACTCACCACAACGTACGTGGGAGCGGGGTTTGTTCGCTCGTTTTCG GGCTCCCTGTGTCGGGCTACGAATTATTTCACAGCTGCGTCTCACTCATT ACGAGCGAAAGGTTTTTAAACTCTTGAAGCTTGCGCACTCCCCCTTTCAT GCCTCCTCCTTCTTCACTCCTTCTCGTTGCACTCTAACCCTCGCCCCCCT GACCCCTTCGACCTCCCTCTTGTCATCCCTTCCTCTCCCTAGGCCACGGT CTGGAGTGCGCGGCACCTGCCTCAGAATCGGGACGTTTTTGTCACGTGCG GAGGGGAAGGAGGATTGGCGCTTTGGCAATAGTAAGGAACGGGGGAGGGA GAGGGAGGGGAAGGGAGGGAGAGGAGGAGAGAAAGGAGACCAGCACAGGG AGTGCACAGAAAAACCGAAGCAGGGGGGGCGGGAGTGAAGCAGGAAGAGG CACCTGATTAGTGTAGGACGACTTCAAGACTTGGTATACAAAGACACGTG TCGGGGAAAGGACTCTCACCTATTTCTCTTCCTCCCTTTTTGACTCTCCA ACCACAGCCACTACGCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACC ACCCCATCTTCGACCTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAA CGCGCGGCTTCTGTCTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGG AGAAGACCGGTCTCTGCGCCATCGCCTCTTTGGGTAATGCTTCTGGAACC CTTCCTGTTCCACTGATGCGCCCCACCAATCCCATTCTGATGGCACTCCT TTGTCTTCCTTTTTTTAAATAAAGATGGACGTTCACCCTTGTGTCTGTCG ACTCGTAACGTCGACCCAAAGCCTCCTCCCTCTTTCCCTATTCCGGTAAT CGCTCGCCCTCCCCTTCTTCCCACACCCCTTCCCTCTCCTCTAGATCAAT GCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAA
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Coding sequence (CDS) from alignment at KK037266.1:40134..42224-

>rna10218 ID=rna10218|Name=rna10218|organism=Nannochloropsis gaditana|type=CDS|length=4893bp|location=Sequence derived from alignment at KK037266.1:40134..42224- (Nannochloropsis gaditana)
ATCAATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCA
CTACGCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTT
CGACCTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTT
CTGTCTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGG
TCTCTGCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTG
CCTCAGAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGC
GCTTTGGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGA
ATCCTCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGA
TGGAAGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTC
TTCTCGATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTA
CGTCATGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCG
ATGGGCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGA
CAACGGCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCC
TTCTCTCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTA
TCAATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCAC
TACGCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTC
GACCTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTC
TGTCTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGT
CTCTGCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGC
CTCAGAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCG
CTTTGGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAA
TCCTCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGAT
GGAAGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCT
TCTCGATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTAC
GTCATGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGA
TGGGCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGAC
AACGGCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCT
TCTCTCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTAT
CAATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCACT
ACGCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTCG
ACCTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTCT
GTCTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGTC
TCTGCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGCC
TCAGAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCGC
TTTGGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAAT
CCTCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATG
GAAGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTT
CTCGATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTACG
TCATGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGAT
GGGCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGACA
ACGGCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCTT
CTCTCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTATC
AATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCACTA
CGCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTCGA
CCTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTCTG
TCTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGTCT
CTGCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGCCT
CAGAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCGCT
TTGGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAATC
CTCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATGG
AAGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTTC
TCGATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTACGT
CATGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGATG
GGCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGACAA
CGGCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCTTC
TCTCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTATCA
ATGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCACTAC
GCCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTCGAC
CTCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTCTGT
CTCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGTCTC
TGCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGCCTC
AGAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCGCTT
TGGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAATCC
TCATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATGGA
AGGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTTCT
CGATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTACGTC
ATGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGATGG
GCAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGACAAC
GGCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCTTCT
CTCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTATCAA
TGCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCACTACG
CCACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTCGACC
TCTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTCTGTC
TCCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGTCTCT
GCGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGCCTCA
GAATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCGCTTT
GGCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAATCCT
CATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATGGAA
GGCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTTCTC
GATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTACGTCA
TGAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGATGGG
CAATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGACAACG
GCGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCTTCTC
TCCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTTATCAAT
GCCTACGCGTTCATCTCGTGACCAGGCTCGCCACGCTATAACCACTACGC
CACCCCTTCTTCCTCGTCCTCCCCTTCCACCACCACCCCATCTTCGACCT
CTGGCCCCGACCCCGGCGCCCTTTCCCTCCTGAACGCGCGGCTTCTGTCT
CCTCAGCCTCTGGTCGCCTTCGATTGGCACAGGGAGAAGACCGGTCTCTG
CGCCATCGCCTCTTTGGGCCACGGTCTGGAGTGCGCGGCACCTGCCTCAG
AATCGGGACGTTTTTGTCACGTGCGGAGGGGAAGGAGGATTGGCGCTTTG
GCAATAGACATTCCTATGAATAAGCTCGTCATCACCATGCTGGAATCCTC
ATTCCTCCTTTGGCGGCTGCGGGGTCGCGACTCATCGGAGACGATGGAAG
GCAGGGTAGCAGGGACGGAGGACAAGCCAGAAGGAGGGGTGGTCTTCTCG
ATCAAGCAGAAGACTCACCACAACACCTCCGCACGAGCAGTCTACGTCAT
GAAAACAACGTGGGGAACGGCGTCACCTCCCTTGAGTTTGACCGATGGGC
AATGCGTCCAACGACAGCGAGCGGGTGGTGGCAGCAGGGTACGACAACGG
CGACGTCAAGCTCTTCGATGCTTCCTCCCTTCCCACCTCCCTCCTTCTCT
CCCTCCTGCCTGCCTCCTCTCTTTCTTTCCCCTTTTTCCCCTT
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Synonyms
Publications