rna1019, rna1019 (mRNA) Nannochloropsis gaditana

Overview
Namerna1019
Unique Namerna1019
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length934
Alignment locationCM002456.1:982204..985181 -

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Properties
Property NameValue
Productmbr-related protein
Orig transcript idgnl|cribi|Naga_100050g42.6866.mrna
Orig protein idgnl|cribi|Naga_100050g42.6866
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:982204..985181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100050g42gene982Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29643.1cds1018Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1019rna1019-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1019 ID=rna1019|Name=rna1019|organism=Nannochloropsis gaditana|type=mRNA|length=934bp
AGGACTCACATTGTCTGCTCCCAGGCTCGAGAACCTCTGTCAGCTTCCAC
ACCACAGCGGAAATACAACTTTCAAACCTCAACCCTCACAGACATTCAGG
GATCAGTATGCATGGGTTTTTCGAACCAAGCTAAGGCAAGAGGTCCGTAC
AACAACATCGCATTATGCAGCCGCCACCACAGGACTCCCTCCCTCCTGCC
CCTGATGCGAGCAGTGCAAACGATGCTACCGTCACTGCCTACGTGGTCTT
TCAGTGCGCTGAATGTCGCCGCATTGTCGGAGATTCTCTAGGGCTCTCGA
GCGCGGACGAAGAGTTGAGGCATATTACCCTCCGCGGTGCCTGTGGTATA
GTCAGGGGCCCTTGTACACGAACATCAGAGGAAGGCAACGACCGGGGCTC
CACGTTTCACGAACTTTTTTGTGAAGGCTGTAGCACTCTACTGGGAAAGG
TTTATTTGACCACTCCCCCGAGGTTAGACGGGGCGCGAAATCTCTTCACC
TTGTCGACGGACGCGCTGGAGAGCTTCGAGCTGGGCACTTACGATCATGT
GTGCGAGGTCCCTCAGCCGGCAATGGCTGCTCCAATACCGTCAAGCGAGT
GTGGCGAAAGCAAGACCTCGATCGAGGCTATGCAGATGGAGCTCGTTAAA
GTCCAGAACATGATGTTGGTCTTCCACGACCGCATATCGGGCCTGGAGCG
TGCACTGAAGACAGGCACGGTGGGAGCACGGACTGGGGGCGGGACCAGAC
GAGGAGCGTGGGGAGTTGATGGGACAGAAAATACCGCAGCGGGAGGGCCT
ACGTTCAAGCGGAGAAAATAGTAGAGAGGACGTGGAGAGGTGAAGGGGGA
GCGGAAACCGGACAATCGGCATGACGAGGGGGAGGGAGGGGCAAGTTGGA
GGGGGAAAAGGGGGCAAAGTACAAACTGGAAAGA
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protein sequence of rna1019

>rna1019-protein ID=rna1019-protein|Name=rna1019|organism=Nannochloropsis gaditana|type=polypeptide|length=419bp
MEEDEDLVGAARVSYGSDGQKGLRMDVDLDVNELTSHLGPAAKPLVAVAR
AIQSTIFYTAPVLALAGLLTQIAGITCSRYTKTQADKKSNKQGKASRTRD
PKKSTVKEEQVRRDAKQRQDRLEKEEKRRQSKEQDQRQRREAKGKMLAKA
KKPHASSTSIWGYLKRAFSSISPGKSKDNKLAFVTRTKGGALLGWNTGGP
STRKSKDGEILDWNAFTVLSLRAACQWALLVAVAAAVGRGVEAAGASRKL
NPRLLISLDVFTASSAVFLSEKVGFLRTQMDMGWYHRVLKKPTWTPRPIV
FPLVWVPLKLLQTAALVLVWRLLDRDALNVPVVLFLLHLTLGDLWNLVFF
GEKRIGFGLSVMYAFYASLAASCYAFYSVLPRAAYLMVPTAVWVFIATSL
NYSIWLLNGTPTRFPTKKG
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mRNA from alignment at CM002456.1:982204..985181-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1019 ID=rna1019|Name=rna1019|organism=Nannochloropsis gaditana|type=mRNA|length=2978bp|location=Sequence derived from alignment at CM002456.1:982204..985181- (Nannochloropsis gaditana)
ATTCTTCTCGGCCTGTACTCGTCGCGCGTGAGACCAGAGTTGGTCGCGGC
CAGGCTTCAGCAACACGGCATCTACTCCTGTCTCCAACGCGAACGCCACG
CCGGAAAGCTGCTCCGCGTCTTCTACCGCCACGCATACTCGGGTCGGCCC
GCCTTGGGCTGCAGCGATGACGTTTTCGCATGGTATTTGGATCCAGTCGA
TGAATGCATCGAGCACGACCCAGTCAACACTACCAATAAGGTTGATAGCC
TTCGTCACGTCCTCCGGCTTGGTGATGGCCAACACTGCTCCCACCAACCT
CTCATGATCGTCCTGGAGGCGACCTGTCGCCTCCTCCTCTACAAGGAAAG
GAACGTCTAAAGGTTCAGTGGGAGCGTGATGGGTCAAACAGCGGCTCGCT
CCCAGAGGAATGAATGCCTTGGTATTTCTCACGTCCACCCACAGCTCCAA
AGATGTCATCTGAACCTGGTTGCGCGGGCGCGAGCCACGGCCGCAACTGT
GCACCGGTGGCGGGTGCGTGACCTTTGAGGAGGTAGAGTGACTCCACGAG
AAAGCAGAGTACTGCAACAGCTGAAAGACGAGAAGGAGCCTCCAGCAGAA
AAGGGGCATATCGCAGCAACCTCCCCCCCGCTAGCGCAATTTGTCACGTC
CGGTGCCTTTGCACGAAGAGTTCCTCCGAGCCATTCAAGAGGGGCGGCAT
GCGGTCAGTCTCCTCAGCATGAAGCGTGCTGCAGTGTTGATAAATGAAAC
ATGGTCAGAAATGTGCCCTGGCAATTCGGCCTTCCAAAAAGAGGCGGCAC
CGCCGTCTCTCTCAAGAAAGGGAAACACGATGCCAGCGATTTGCCCGCCT
CGAGACAGGACCTTCGCTTCTGTTGCTACGCGCCGCGACGTGTCGCCCCA
CTCATCGCATCCCACACACGTTCAGGTACTCTCTGTAGTCAGGTGGCTGC
AGAGACGCATCATGGGGACCGGCCGTGTGGCCGTGGCCTTTCTCTTGGCA
GGTGTTCTCGCGGGAAGGGCACTTGGAATCAGTGATCTTCCCCCTCTTCC
CGCCGCCTCCCACCCTCCCTCCTCCTACGCCGCCTCCACCATGGACCCCG
CCTCGATATCACGATTATTGGCAAGGCGGGGTGGCATTAAGATCCGAGCA
GAGCCTGTGATTGAATCGGAGGCCTCCAGAATACGGGTGAGTTCCTTGTT
GGACGCGGGAAAGGGCGGAACGGACCATCTACTAGCGACATGATCGGGAA
CAGTGAGGCGATGACCCCGTTTCGAAGGAACCTTAAAATTTTGTTGCACG
TACGAACAGACACGTAAAAGTAGCGACTCAGATTCAAAAAGTGGCGCCAC
GAAAAGTGGGGGTGGAAACGAGCGGATGGAGGAAGACGAGGACCTGGTAG
GGGCTGCTCGCGTGAGCTATGGTAGCGATGGCCAAAAGGGTTTGAGGATG
GATGTAGACTTGGACGTGAATGAGCTAACAAGCCACTTGGGACCCGCAGC
AAAGCCATTGGTTGCCGTGGCCCGCGCCATTCAGTCGACGATCTTCTACA
CGGCGCCAGTTCTTGCCCTGGCCGGCCTCCTGACTCAAATAGCGGGCATT
ACGTGCTCCCGGTATACGAAAACGCAGGCGGACAAGAAAAGCAACAAGCA
GGGCAAGGCTTCAAGGACGAGGGACCCGAAGAAGTCCACCGTCAAGGAGG
AGCAAGTCAGGCGGGACGCTAAGCAACGGCAAGACCGACTTGAGAAGGAG
GAAAAGCGACGACAGTCAAAAGAGCAAGACCAGCGGCAGCGGCGAGAAGC
CAAAGGCAAGATGCTAGCCAAAGCGAAGAAGCCTCACGCATCTTCCACGT
CGATTTGGGGCTATCTGAAGCGGGCCTTTTCCTCTATCTCCCCGGGGAAG
AGCAAGGACAACAAGCTGGCTTTCGTCACCAGGACCAAGGGGGGAGCTCT
CCTCGGCTGGAACACCGGCGGGCCGTCCACGAGGAAGAGCAAAGACGGCG
AGATCCTGGACTGGAATGCCTTCACGGTCCTCTCGCTCCGTGCAGCGTGC
CAGTGGGCTCTGCTGGTGGCGGTGGCTGCTGCGGTGGGGCGTGGGGTGGA
GGCGGCGGGCGCCAGCCGAAAGCTGAATCCCCGGCTTCTCATTTCCCTGG
ACGTCTTCACGGCCTCCTCCGCCGTCTTCCTCAGCGAGAAGGTTGGCTTC
CTCCGCACCCAGATGGACATGGGCTGGTACCACCGGGTCCTGAAGAAGCC
CACGTGGACCCCCCGCCCCATCGTCTTCCCTCTCGTTTGGGTCCCCTTGA
AGCTCCTTCAGACCGCCGCCTTGGTCCTGGTCTGGCGCCTGCTCGATCGC
GACGCCCTGAATGTGCCCGTCGTGCTCTTCTTGCTGCACCTGACCCTGGG
GGACCTCTGGAACCTGGTCTTCTTCGGGGAGAAGAGAATAGGCTTCGGGC
TCAGCGTCATGTACGCTTTCTACGCCTCCCTGGCCGCCTCCTGTTACGCC
TTCTACAGCGTGCTGCCTCGGGCCGCCTATCTTATGGTGCCGACCGCAGT
GTGGGTGTTCATCGCCACCTCTCTGAACTACTCGATCTGGCTCTTGAACG
GCACGCCCACGCGCTTCCCGACCAAGAAGGGTTAGGGGAAGGGAAAGCCG
AGAGGAGGGATTGGTAAAGAGAGAGAGGATGGCAGGCATGGGAGGAAGGA
AAAGGGGGACATGGAGGGAGGGCAAAGCAGCGCCCTGCTGCTGGAAGGGG
CGAGGAGCCGGAGTCATGCATCCCACCAGCCGACGTAATTTCCCGGCAGG
AGCAGCACGACGTCCGAGGAGGCTTGCGCCCCAGGCGACGCAATTTACCT
TTCTATACATACATGCCAGGTCCTAACACAGCCCAAAGGCTGCAGACTGA
GCCTTCGAACCTCGCCAGGGGGCATTTGCGGTTTGAGACAGAAAATGGAA
AGAAAAGTAGACGTAAGAAAGTGACAGC
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Coding sequence (CDS) from alignment at CM002456.1:982204..985181-

>rna1019 ID=rna1019|Name=rna1019|organism=Nannochloropsis gaditana|type=CDS|length=1260bp|location=Sequence derived from alignment at CM002456.1:982204..985181- (Nannochloropsis gaditana)
ATGGAGGAAGACGAGGACCTGGTAGGGGCTGCTCGCGTGAGCTATGGTAG
CGATGGCCAAAAGGGTTTGAGGATGGATGTAGACTTGGACGTGAATGAGC
TAACAAGCCACTTGGGACCCGCAGCAAAGCCATTGGTTGCCGTGGCCCGC
GCCATTCAGTCGACGATCTTCTACACGGCGCCAGTTCTTGCCCTGGCCGG
CCTCCTGACTCAAATAGCGGGCATTACGTGCTCCCGGTATACGAAAACGC
AGGCGGACAAGAAAAGCAACAAGCAGGGCAAGGCTTCAAGGACGAGGGAC
CCGAAGAAGTCCACCGTCAAGGAGGAGCAAGTCAGGCGGGACGCTAAGCA
ACGGCAAGACCGACTTGAGAAGGAGGAAAAGCGACGACAGTCAAAAGAGC
AAGACCAGCGGCAGCGGCGAGAAGCCAAAGGCAAGATGCTAGCCAAAGCG
AAGAAGCCTCACGCATCTTCCACGTCGATTTGGGGCTATCTGAAGCGGGC
CTTTTCCTCTATCTCCCCGGGGAAGAGCAAGGACAACAAGCTGGCTTTCG
TCACCAGGACCAAGGGGGGAGCTCTCCTCGGCTGGAACACCGGCGGGCCG
TCCACGAGGAAGAGCAAAGACGGCGAGATCCTGGACTGGAATGCCTTCAC
GGTCCTCTCGCTCCGTGCAGCGTGCCAGTGGGCTCTGCTGGTGGCGGTGG
CTGCTGCGGTGGGGCGTGGGGTGGAGGCGGCGGGCGCCAGCCGAAAGCTG
AATCCCCGGCTTCTCATTTCCCTGGACGTCTTCACGGCCTCCTCCGCCGT
CTTCCTCAGCGAGAAGGTTGGCTTCCTCCGCACCCAGATGGACATGGGCT
GGTACCACCGGGTCCTGAAGAAGCCCACGTGGACCCCCCGCCCCATCGTC
TTCCCTCTCGTTTGGGTCCCCTTGAAGCTCCTTCAGACCGCCGCCTTGGT
CCTGGTCTGGCGCCTGCTCGATCGCGACGCCCTGAATGTGCCCGTCGTGC
TCTTCTTGCTGCACCTGACCCTGGGGGACCTCTGGAACCTGGTCTTCTTC
GGGGAGAAGAGAATAGGCTTCGGGCTCAGCGTCATGTACGCTTTCTACGC
CTCCCTGGCCGCCTCCTGTTACGCCTTCTACAGCGTGCTGCCTCGGGCCG
CCTATCTTATGGTGCCGACCGCAGTGTGGGTGTTCATCGCCACCTCTCTG
AACTACTCGATCTGGCTCTTGAACGGCACGCCCACGCGCTTCCCGACCAA
GAAGGGTTAG
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Synonyms
Publications