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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100335g5.5838.mrna |
| Orig protein id | gnl|cribi|Naga_100335g5.5838 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037264.1 | supercontig | KK037264.1:66276..69882 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10182 ID=rna10182|Name=rna10182|organism=Nannochloropsis gaditana|type=mRNA|length=1023bp
ATGCGCTTCCTTATTATCCTTTTTATCCTTCCATTCGCCACCTTTGCTGC
CTTCACCAAACAAAAGTACACCGGTGGCCTTTTCTCGGACCCAACCCAGA
AGCCTCAGCCCTCCTTGGCGGTAAATGCCTGGAGCTACTACCCCAACACC
TTTGGAACGTGCAACGGGACTACCTTCGACAGCTGCCCGTGCGGTGCAGG
CACTGCCGAGCCCTGTGGGCCCTTGAACTGGCCATACATCAGTGCTGCTT
GCTTTCAGACGTGCTTGCCGGGGAACGGTGGAGGCCAGCAGTCTCCCATC
AACCTGGACGCCTTTGAGGAGGGCTATGAGGGCTTGGGCAAGGCTCGAGG
TCGGATGAAGTTCTCGGGAGGACGGTGTGCAGGGCTCGTGGAACAGAACA
ATCTTACTTACGAGGTCAGCTTTTTCGGGAGCGCATGCCGGAAACCTTTC
ACGCTTACTGTCGACGGGCAGGTATGGGTGCTGTGGCAAATACATTTCCA
CGGCACATCTCTACATTCGGTAAATGGTCGTTATAGCCCTATTGAGGTGC
ATATGGCACATTTGCCTGTAGGCAAGACGCCAACCACGGCCGATACCAAT
GCGTTGGTCTTAGCTGTGTTCTTGAGGCCCGGGAAGGCCAACAGGCTCTT
CAACATCCTGACTGCTCGGCGTGCCGACGAAGGGACGGTGCCTGGTGGGG
AGGAAGTGCGCATGGTCAAGGCCGGCAATCCCTACTGGTTGCTGCCGAAA
CGAAAGGACTATTGGCACTATCAAGGCTCTCTTGGCACTCCATCTTTCTT
TGGTGCATGTCAGCTCAATCCCGGCCCGAGCTTCAACAGCACGATAAACA
ATGTCCAGTGGTACGTGTTCAAGCATCAGCAGACGGCAAGCACGTCCCAG
ATAGCTTGGTACGCAGATTACGCTTGTGACTTGCCTCTGCCATATTTATG
CAGGAACAACCGTCCGCTGCAAGAGATTCTGCCCGAGACCCAGGTCTATT
CATATGGCAGGGTGCTCAAATAG back to topprotein sequence of rna10182 >rna10182-protein ID=rna10182-protein|Name=rna10182|organism=Nannochloropsis gaditana|type=polypeptide|length=193bp
MRALCVGLIRQPGNVDVIIASEKAFDARRKKKRRNLQQRQHWACSCFNIP
NTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEA
VRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKN
GLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMAD back to topmRNA from alignment at KK037264.1:66276..69882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10182 ID=rna10182|Name=rna10182|organism=Nannochloropsis gaditana|type=mRNA|length=3607bp|location=Sequence derived from alignment at KK037264.1:66276..69882+ (Nannochloropsis gaditana)
ATGAGGGCGTTATGCGTTGGGCTGATACGGCAGCCCGGTAATGTAGATGT
TATAATAGCAAGCGAGAAAGCATTTGACGctcgaagaaaaaaaaagcgaa
GAAATTTACAGCAGCGACAGCACTGGTGATGACATAGATATCGTAGGAAG
AATTAATGAAAAGGACTGAAACGTGAATTTACTGTCACCCTGGTTGGCTG
TCTTCCTTTTGTGCGAAGGCAGCCAGCTTGCTTCATGCGATGAGGGTATC
ATTACCACATCTTCGAATTTCTCGCCTTGTCTGGCAATGCCTCCCCATCC
TTGTCAGGCCACTTCCTCAATCTAGATCTTGGAGTCCCTTGTAGATCAAT
CGCCTTTAGCCTTGCTGATAATTAttctttctccacgtccttctcCCATC
ATCCCTCGAAGAAATGCTTTATAAATGTCGCCTGGCACGCGTCAAGCCAC
GCCACTAAATTCAAAAAAGGAGCAGAGTCTAGATCGCGGAGGCCCTTGTA
GATCAATCGCCTTTAGCCTTGCTGATAATTAttctttctccacgtccttc
tcCCATCATCCCTCGAAGAAATGCTTTATAAATGTCGCCTGGCACGCGTC
AAGCCACGCCACTAAATTCAAAAAAGGAGCAGAGCTAAGTATTTTGTAGC
GAGTCCTCGCATGACCCAAAACAAACCCGGTTCCAAGTCTTATGGGGGTA
GAGCGACAAGATTAGGATTTACGACTGGCAAACACCGACATCATCTGCTG
TGTCTCCCGGCCTCGTCACCACCCGAAGCTAAGCAGGAAATGAGCAGTCG
GTTGTGATATATCTGCATACGTCGAGAGGCAAGTTGCTTGCATTCGATGT
TTGTTGTAGATGTTTTGAAGGGCCCAGTCTACTGGCAAGAGAGCAGTACG
ACGGGCACATTCTGCCAGCGGGAGAGCAAGGATGATGGGGCTTTACGCGT
CCTGTTCATCACACACCAGGCGGTCTGGATTACACGAGTAGCCATCAagg
tggcgcgggcgggtGATTACGCGGCGAGATTACGGTCGGGAAGTTTTGAG
GAACTAAAGGCTTTGTTATTAGAGGGGGTGCCGGTTGGAAGTTCCTGACC
TGGTCGCACCAGAGGCTTGAATGCGAAGgatggagagaaaaggaggggag
ccAAGGGCTACGATCCACCTAGTCACTTGAGAACTATGCATAGTTTAATT
AAATGCTTAGTGGATGGGGCGGAAAGTGTTAGATAAAGCCTTTGAAAGTC
TTGGAGGGAATGGGTGGGATTTAAGAATAGCAGATAGGATTGACGGGTTA
AGTTTACGCGATTTTTGAAGGAACCGGAAGCGAAGAGCAATAAAGTGGCC
CAGGTATCTTCGAAAACTGTGAGCTAGATGTGAACTGCAAATCAGTGGGA
GTGTAGATCGGTAAGGGAACTATCTCCGTCGTCAGACTTTGtgcgtgtgt
gtgtgtaGTGGGTGTGCGTGTGTCAGGGTCAGGGTAGAGAGTACATGGAG
CACATGAGCAGAGCCAAAAACACGATCAGGAAGGATATAAATCAGCCGTG
CACGAAAGTAACCCAAGGTAATAAGTCGTACACCCAGAAATGATAGGGGT
AGGACACATGCCCTTGTtaccttctttttcctttctatattttctccctc
cccctttaaTCCATCCTATTTGTCGTtatctttctttttcttgcccatAT
CTCTCTTCTTCAGCAAGGCTTCTCTCCCCTACAGTCTACATGGTGATGTA
AGGAAAAGACTTAATATATGTGCCCGAGAAGACTATcaatacatatatat
atgtgcCCTTGTtaccttcttttcccctgaaGAATCATCCGCTGAAagag
aggtgaaggaaggTCCCATCCTGATTATTAATTAATTTGATTAAATTTAT
CATGCGGATTTCTTTGGAATGCTTACGACTGAATCCAAAGCTTTCCAAAC
TCTCAAGTGGTGTGGATAACGAGTTACAGGGTTTTCAGAGCTACATCAGT
GGTAAACGATCTCTAACCTCCCCAACGTAGCGAGCGAGCATAGAGCCCGC
CCTGATTTATCTGGATTCGCCTCCAGCACTCGTACACCTCGTTCATGTAC
GCTGGCATATATGTTTTGATAGTAACGTGTAGTAAGTTAGCCTTGAAGTG
CAAATCTGAGAAGCCATCCTCCGCTCACTCCATTATATCGAACACTGCAC
AAATCGCATCATTTTCTTCACACTGCAAGCTCAGTCCTGTCACACATAAC
TTAGATTACAATATCCACCCAACCACAGGGCCTGCTCGTGCTTTAACATC
CCAAATACGAGCGTGGAGGATATATTTCAGCTAATTCAATGTTGCGGACA
ctcaggaaaaaaaagaggttGACTTGGGGCGCTTGCGTGCGCTTCTAACT
CAGAACAAGGTGAGTAGCAAGCCGAAATAGTAAAAATGGACCGGAGGCTT
GTGTGTAGTACAAGAGCTTGCTCAACAGAGACTCATAGAGCGAATTTAGG
ACTCGTTTCGCTGAGCTTATGGGGCTAAAGCACCAACACCGTGTCACGCC
ACGGAGTATTCGACCCTGTCTCCTTTTGTTTCTGATACCTACCAGGCTCT
CGTTCATGCAAAAGGAAGAATGGATGAGGAGACACCTTTGCACATAGCAG
CTGCAGAGGTAAGGATTCGTCTTAGTGTACACGGGGATAGCTTGGCCTGG
TGGGCAGAAGAAAGAATGCCCTGCGTGgtgatgaagaggacgacgagacg
CTTAGGATGGACGCCCAGTCCCCCGTGTGCCGGCCCGAATACACCTTCAG
AGTTGAGGAAAGATTAATTTTGGGCTCTTTTCTCACCTACTATCCAGGGG
TCCTCGAGGCCGTTCGACTGCTCCTGCAAGCAGGGGCGTCGCCCGCGGCT
GTCGACAAGGCGGGCTACACGCCCTCGCACTGGGCCGCGGGGAAAGGACA
CGAAAAGGTGGTTGAGGTAGGCCGATCGCGGATGGTATCGATCTCTACAC
CCGTGTCTCGGCTCTGCAGGATTTACCCCAGCACTAACCCTGAATATGCC
TGAGCATGGCAGGATTTACCCCAGCACTAACCCCGAATATGCCTGAGATG
AGAGGATGGCCTCTTTCGTCATCCTTCATCCAGTCCCTGGAGCCTATTct
tcccaccttcttcccatctcACCCTTCCTACTCGATTAGGAGCTCTTGAA
GCACAAAGCTGATGCCAACGCCGTGGACAAGAACGGACTCACACCTCTTC
ATTGGGCCGCCTACTGGTGAGGACtcagggcagggaaggcaggtCATGCG
agcggccttcctcctctcatgATCGTGACATGCCGTGGGTTAAACCGAAT
GGCGAGGGTCTTTCGTTGAGATGCCAGTCCATCGTGGCggctcctttcct
tcgtcttccctttGACAGATGCGGCCACAAGGAAGAGCGCAAGCAGCGTC
TCATGTCGCACTGACTCCTCCGTGTTCCTCCACATGCTCGCACCACCCAT
TTTGCAGGGGTCAAACAGCGTGTATCAAGGAGCTGCTCTacaagggggag
gcggatcCGAACGCCCAGGACCACTTACAGCACACGCCCTTCATGATGGC
GGACTGA back to topCoding sequence (CDS) from alignment at KK037264.1:66276..69882+ >rna10182 ID=rna10182|Name=rna10182|organism=Nannochloropsis gaditana|type=CDS|length=4074bp|location=Sequence derived from alignment at KK037264.1:66276..69882+ (Nannochloropsis gaditana)
ATGAGGGCGTTATGCGTTGGGCTGATACGGCAGCCCGGTAATGTAGATGT
TATAATAGCAAGCGAGAAAGCATTTGACGctcgaagaaaaaaaaagcgaa
GAAATTTACAGCAGCGACAGCACTGGGCCTGCTCGTGCTTTAACATCCCA
AATACGAGCgaaaaaaaagaggttGACTTGGGGCGCTTGCGTGCGCTTCT
AACTCAGAACAAGGCTCTCGTTCATGCAAAAGGAAGAATGGATGAGGAGA
CACCTTTGCACATAGCAGCTGCAGAGGTAAGGATTCGGGTCCTCGAGGCC
GTTCGACTGCTCCTGCAAGCAGGGGCGTCGCCCGCGGCTGTCGACAAGGC
GGGCTACACGCCCTCGCACTGGGCCGCGGGGAAAGGACACGAAAAGGTGG
TTGAGGAGCTCTTGAAGCACAAAGCTGATGCCAACGCCGTGGACAAGAAC
GGACTCACACCTCTTCATTGGGCCGCCTACTGGGGTCAAACAGCGTGTAT
CAAGGAGCTGCTCTacaagggggaggcggatcCGAACGCCCAGGACCACT
TACAGCACACGCCCTTCATGATGGCGGACTGAATGAGGGCGTTATGCGTT
GGGCTGATACGGCAGCCCGGTAATGTAGATGTTATAATAGCAAGCGAGAA
AGCATTTGACGctcgaagaaaaaaaaagcgaaGAAATTTACAGCAGCGAC
AGCACTGGGCCTGCTCGTGCTTTAACATCCCAAATACGAGCgaaaaaaaa
gaggttGACTTGGGGCGCTTGCGTGCGCTTCTAACTCAGAACAAGGCTCT
CGTTCATGCAAAAGGAAGAATGGATGAGGAGACACCTTTGCACATAGCAG
CTGCAGAGGTAAGGATTCGGGTCCTCGAGGCCGTTCGACTGCTCCTGCAA
GCAGGGGCGTCGCCCGCGGCTGTCGACAAGGCGGGCTACACGCCCTCGCA
CTGGGCCGCGGGGAAAGGACACGAAAAGGTGGTTGAGGAGCTCTTGAAGC
ACAAAGCTGATGCCAACGCCGTGGACAAGAACGGACTCACACCTCTTCAT
TGGGCCGCCTACTGGGGTCAAACAGCGTGTATCAAGGAGCTGCTCTacaa
gggggaggcggatcCGAACGCCCAGGACCACTTACAGCACACGCCCTTCA
TGATGGCGGACTGAATGAGGGCGTTATGCGTTGGGCTGATACGGCAGCCC
GGTAATGTAGATGTTATAATAGCAAGCGAGAAAGCATTTGACGctcgaag
aaaaaaaaagcgaaGAAATTTACAGCAGCGACAGCACTGGGCCTGCTCGT
GCTTTAACATCCCAAATACGAGCgaaaaaaaagaggttGACTTGGGGCGC
TTGCGTGCGCTTCTAACTCAGAACAAGGCTCTCGTTCATGCAAAAGGAAG
AATGGATGAGGAGACACCTTTGCACATAGCAGCTGCAGAGGTAAGGATTC
GGGTCCTCGAGGCCGTTCGACTGCTCCTGCAAGCAGGGGCGTCGCCCGCG
GCTGTCGACAAGGCGGGCTACACGCCCTCGCACTGGGCCGCGGGGAAAGG
ACACGAAAAGGTGGTTGAGGAGCTCTTGAAGCACAAAGCTGATGCCAACG
CCGTGGACAAGAACGGACTCACACCTCTTCATTGGGCCGCCTACTGGGGT
CAAACAGCGTGTATCAAGGAGCTGCTCTacaagggggaggcggatcCGAA
CGCCCAGGACCACTTACAGCACACGCCCTTCATGATGGCGGACTGAATGA
GGGCGTTATGCGTTGGGCTGATACGGCAGCCCGGTAATGTAGATGTTATA
ATAGCAAGCGAGAAAGCATTTGACGctcgaagaaaaaaaaagcgaaGAAA
TTTACAGCAGCGACAGCACTGGGCCTGCTCGTGCTTTAACATCCCAAATA
CGAGCgaaaaaaaagaggttGACTTGGGGCGCTTGCGTGCGCTTCTAACT
CAGAACAAGGCTCTCGTTCATGCAAAAGGAAGAATGGATGAGGAGACACC
TTTGCACATAGCAGCTGCAGAGGTAAGGATTCGGGTCCTCGAGGCCGTTC
GACTGCTCCTGCAAGCAGGGGCGTCGCCCGCGGCTGTCGACAAGGCGGGC
TACACGCCCTCGCACTGGGCCGCGGGGAAAGGACACGAAAAGGTGGTTGA
GGAGCTCTTGAAGCACAAAGCTGATGCCAACGCCGTGGACAAGAACGGAC
TCACACCTCTTCATTGGGCCGCCTACTGGGGTCAAACAGCGTGTATCAAG
GAGCTGCTCTacaagggggaggcggatcCGAACGCCCAGGACCACTTACA
GCACACGCCCTTCATGATGGCGGACTGAATGAGGGCGTTATGCGTTGGGC
TGATACGGCAGCCCGGTAATGTAGATGTTATAATAGCAAGCGAGAAAGCA
TTTGACGctcgaagaaaaaaaaagcgaaGAAATTTACAGCAGCGACAGCA
CTGGGCCTGCTCGTGCTTTAACATCCCAAATACGAGCgaaaaaaaagagg
ttGACTTGGGGCGCTTGCGTGCGCTTCTAACTCAGAACAAGGCTCTCGTT
CATGCAAAAGGAAGAATGGATGAGGAGACACCTTTGCACATAGCAGCTGC
AGAGGTAAGGATTCGGGTCCTCGAGGCCGTTCGACTGCTCCTGCAAGCAG
GGGCGTCGCCCGCGGCTGTCGACAAGGCGGGCTACACGCCCTCGCACTGG
GCCGCGGGGAAAGGACACGAAAAGGTGGTTGAGGAGCTCTTGAAGCACAA
AGCTGATGCCAACGCCGTGGACAAGAACGGACTCACACCTCTTCATTGGG
CCGCCTACTGGGGTCAAACAGCGTGTATCAAGGAGCTGCTCTacaagggg
gaggcggatcCGAACGCCCAGGACCACTTACAGCACACGCCCTTCATGAT
GGCGGACTGAATGAGGGCGTTATGCGTTGGGCTGATACGGCAGCCCGGTA
ATGTAGATGTTATAATAGCAAGCGAGAAAGCATTTGACGctcgaagaaaa
aaaaagcgaaGAAATTTACAGCAGCGACAGCACTGGGCCTGCTCGTGCTT
TAACATCCCAAATACGAGCgaaaaaaaagaggttGACTTGGGGCGCTTGC
GTGCGCTTCTAACTCAGAACAAGGCTCTCGTTCATGCAAAAGGAAGAATG
GATGAGGAGACACCTTTGCACATAGCAGCTGCAGAGGTAAGGATTCGGGT
CCTCGAGGCCGTTCGACTGCTCCTGCAAGCAGGGGCGTCGCCCGCGGCTG
TCGACAAGGCGGGCTACACGCCCTCGCACTGGGCCGCGGGGAAAGGACAC
GAAAAGGTGGTTGAGGAGCTCTTGAAGCACAAAGCTGATGCCAACGCCGT
GGACAAGAACGGACTCACACCTCTTCATTGGGCCGCCTACTGGGGTCAAA
CAGCGTGTATCAAGGAGCTGCTCTacaagggggaggcggatcCGAACGCC
CAGGACCACTTACAGCACACGCCCTTCATGATGGCGGACTGAATGAGGGC
GTTATGCGTTGGGCTGATACGGCAGCCCGGTAATGTAGATGTTATAATAG
CAAGCGAGAAAGCATTTGACGctcgaagaaaaaaaaagcgaaGAAATTTA
CAGCAGCGACAGCACTGGGCCTGCTCGTGCTTTAACATCCCAAATACGAG
CgaaaaaaaagaggttGACTTGGGGCGCTTGCGTGCGCTTCTAACTCAGA
ACAAGGCTCTCGTTCATGCAAAAGGAAGAATGGATGAGGAGACACCTTTG
CACATAGCAGCTGCAGAGGTAAGGATTCGGGTCCTCGAGGCCGTTCGACT
GCTCCTGCAAGCAGGGGCGTCGCCCGCGGCTGTCGACAAGGCGGGCTACA
CGCCCTCGCACTGGGCCGCGGGGAAAGGACACGAAAAGGTGGTTGAGGAG
CTCTTGAAGCACAAAGCTGATGCCAACGCCGTGGACAAGAACGGACTCAC
ACCTCTTCATTGGGCCGCCTACTGGGGTCAAACAGCGTGTATCAAGGAGC
TGCTCTacaagggggaggcggatcCGAACGCCCAGGACCACTTACAGCAC
ACGCCCTTCATGATGGCGGACTGA back to top
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