EWM20522.1, cds10151 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|585100201|gb|EWM20522.1| (hypothetical protein Naga_100335g5 [Nannochloropsis gaditana]) HSP 1 Score: 399.438 bits (1025), Expect = 7.365e-141 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 Query: 1 MRALCVGLIRQPGNVDVIIASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMAD 193 MRALCVGLIRQPGNVDVIIASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMAD Sbjct: 1 MRALCVGLIRQPGNVDVIIASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMAD 193
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|585103440|gb|EWM22814.1| (Ankyrin repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 251.906 bits (642), Expect = 1.328e-80 Identity = 125/141 (88.65%), Postives = 129/141 (91.49%), Query Frame = 0 Query: 52 TSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 T EKKEVDLGRLR LL+QNKALVHAKGRMDEETPLH+AAAE V+EAVRLLLQAGASPAAVDKAGYTP HWAAGKGHEKVVE+LLKH ADANA DKNGLTPLH AAYWGQTACIKELLYKG ADPN QDHLQHTPFMMA Sbjct: 17 TQEKKEVDLGRLRVLLSQNKALVHAKGRMDEETPLHVAAAE---GVVEAVRLLLQAGASPAAVDKAGYTPLHWAAGKGHEKVVEDLLKHNADANAADKNGLTPLHRAAYWGQTACIKELLYKGGADPNVQDHLQHTPFMMA 154
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|553180185|ref|XP_005853359.1| (cd4-specific ankyrin repeat protein [Nannochloropsis gaditana CCMP526] >gi|553186697|ref|XP_005854472.1| cd4-specific ankyrin repeat protein [Nannochloropsis gaditana CCMP526] >gi|422294589|gb|EKU21889.1| cd4-specific ankyrin repeat protein [Nannochloropsis gaditana CCMP526] >gi|422295703|gb|EKU23002.1| cd4-specific ankyrin repeat protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 205.297 bits (521), Expect = 2.266e-64 Identity = 105/141 (74.47%), Postives = 108/141 (76.60%), Query Frame = 0 Query: 52 TSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 T EKKEVDLGRLR LL+QNK +V EAVRLLLQAGASPAAVDKAGYTP HWAAGKGHEKVVE+LLKH ADANA DKNGLTPLH AAYWGQTACIKELLYKG ADPN QDHLQHTPFMMA Sbjct: 17 TQEKKEVDLGRLRVLLSQNKGVV------------------------EAVRLLLQAGASPAAVDKAGYTPLHWAAGKGHEKVVEDLLKHNADANAADKNGLTPLHRAAYWGQTACIKELLYKGGADPNVQDHLQHTPFMMA 133
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|303324764|pdb|2XEE|A (Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. >gi|303324765|pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. >gi|303324766|pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. >gi|303324767|pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module.) HSP 1 Score: 103.99 bits (258), Expect = 7.004e-25 Identity = 66/127 (51.97%), Postives = 79/127 (62.20%), Query Frame = 0 Query: 66 LLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 +L N A V+AK + D TPLH+AA E LE V +LL+AGA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NAQD TPF +A Sbjct: 20 ILMANGADVNAKDK-DGYTPLHLAAREGH---LEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAQDKFGKTPFDLA 141 HSP 2 Score: 83.1889 bits (204), Expect = 6.339e-17 Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 99 EAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 + VR+L+ GA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NA+D +TP +A Sbjct: 16 DEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAKDKDGYTPLHLA 108
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|303324768|pdb|2XEH|A (Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. >gi|303324769|pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. >gi|303324770|pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module.) HSP 1 Score: 103.605 bits (257), Expect = 9.674e-25 Identity = 66/127 (51.97%), Postives = 79/127 (62.20%), Query Frame = 0 Query: 66 LLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 +L N A V+AK + D TPLH+AA E LE V +LL+AGA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NAQD TPF +A Sbjct: 20 ILMANGADVNAKDK-DGYTPLHLAAREGH---LEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAQDKFGKTPFDLA 141 HSP 2 Score: 83.1889 bits (204), Expect = 7.279e-17 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0 Query: 101 VRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 VR+L+ GA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NA+D +TP +A Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAKDKDGYTPLHLA 108
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|160286023|pdb|2QYJ|A (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin) HSP 1 Score: 99.7525 bits (247), Expect = 3.512e-23 Identity = 64/124 (51.61%), Postives = 76/124 (61.29%), Query Frame = 0 Query: 66 LLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPF 189 +L N A V+AK + D TPLH+AA E LE V +LL+AGA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NAQD T F Sbjct: 32 ILMANGADVNAKDK-DGYTPLHLAAREGH---LEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAQDKFGKTAF 150 HSP 2 Score: 83.5741 bits (205), Expect = 5.648e-17 Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 99 EAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 + VR+L+ GA A DK GYTP H AA +GH ++VE LLK AD NA DK+G TPLH AA G + E+L K AD NA+D +TP +A Sbjct: 28 DEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV-EVLLKAGADVNAKDKDGYTPLHLA 120
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|453055699|pdb|4ATZ|D (Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein >gi|453055700|pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein >gi|453055701|pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein) HSP 1 Score: 95.5153 bits (236), Expect = 1.134e-21 Identity = 55/106 (51.89%), Postives = 66/106 (62.26%), Query Frame = 0 Query: 84 TPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPF 189 TPLH+AAA + LE V +LL+ GA AVD G TP H AA GH ++VE LLK+ AD NA D G+TPL+ AAYWG ++ LL G AD NAQD T F Sbjct: 37 TPLHMAAA---VGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHG-ADVNAQDKFGKTAF 138 HSP 2 Score: 79.337 bits (194), Expect = 1.766e-15 Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0 Query: 99 EAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 + VR+L+ GA A D G TP H AA GH ++VE LL++ AD NAVD NG TPLH AA G ++ LL G AD NA+D TP +A Sbjct: 16 DEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYG-ADVNAKDATGITPLYLA 108
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|1177806150|pdb|5KWD|A (Chain A, Computationally Designed Symmetric Homotetramer >gi|1177806151|pdb|5KWD|B Chain B, Computationally Designed Symmetric Homotetramer >gi|1177806152|pdb|5KWD|C Chain C, Computationally Designed Symmetric Homotetramer >gi|1177806153|pdb|5KWD|D Chain D, Computationally Designed Symmetric Homotetramer) HSP 1 Score: 95.1301 bits (235), Expect = 1.929e-21 Identity = 55/112 (49.11%), Postives = 67/112 (59.82%), Query Frame = 0 Query: 81 DEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 D TPLH AA + + V LLL+ GA P A D G TP H+AA GH+++VE LL+H AD NA D +G TPLH+AA G +K LL KG ADPN D TP +A Sbjct: 35 DGRTPLHYAAENGHLII---VLLLLEKGADPNAKDSDGRTPLHYAAENGHKEIVEALLEHGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKG-ADPNTSDSDGRTPLDLA 142 HSP 2 Score: 78.9518 bits (193), Expect = 3.715e-15 Identity = 51/105 (48.57%), Postives = 61/105 (58.10%), Query Frame = 0 Query: 88 IAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 IAA E I V V +LL+ GA P A DK G TP H+AA GH +V LL+ AD NA D +G TPLH+AA G ++ LL G ADPNA+D TP A Sbjct: 9 IAAREGMIIV---VIVLLEKGADPNASDKDGRTPLHYAAENGHLIIVLLLLEKGADPNAKDSDGRTPLHYAAENGHKEIVEALLEHG-ADPNAKDSDGRTPLHYA 109 HSP 3 Score: 65.4698 bits (158), Expect = 4.703e-10 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 0 Query: 81 DEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKEL 170 D TPLH AA ++EA LL+ GA P A D G TP H+AA GH+++V+ LL AD N D +G TPL A G +K L Sbjct: 68 DGRTPLHYAAENGHKEIVEA---LLEHGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLL 154
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|228013288|gb|ACP49049.1| (Ankyrin [Sulfolobus islandicus Y.N.15.51]) HSP 1 Score: 98.9821 bits (245), Expect = 2.974e-21 Identity = 76/183 (41.53%), Postives = 98/183 (53.55%), Query Frame = 0 Query: 11 QPGNVDVI-IASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 Q G+VDV+ + E+ D K N Q H A K +VD+ R+ L + A +AK + +TPLH+AA E + V VR+LL+ GA P A D G TP H AA KG VV LL+ AD NA D NG TPLH AA+ G ++ LL +G ADPNA+D+ TP MA Sbjct: 147 QIGDVDVVRVLLERGADPNAKDN--NGQTPLHMAA---------HKGDVDVVRV---LLERGADPNAKDN-NGQTPLHMAAQEGDVDV---VRVLLERGADPNAKDNNGQTPLHMAAHKGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLERG-ADPNAKDNNGQTPLHMA 310 HSP 2 Score: 94.7449 bits (234), Expect = 1.163e-19 Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 84 TPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 TPLH+AA +I ++ VR+LL+ GA P A D G TP H AA KG VV LL+ AD NA D NG TPLH AA G ++ LL +G ADPNA+D+ TP MA Sbjct: 140 TPLHMAA---QIGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGDVDVVRVLLERGADPNAKDNNGQTPLHMAAQEGDVDVVRVLLERG-ADPNAKDNNGQTPLHMA 244 HSP 3 Score: 90.5077 bits (223), Expect = 3.215e-18 Identity = 72/181 (39.78%), Postives = 94/181 (51.93%), Query Frame = 0 Query: 13 GNVDVI-IASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 G+VDV+ + E+ D K N Q H A +E D+ +R LL + A +AK + +TPLH+AA + + V VR+LL+ GA P A D G TP H AA KGH VV LL+ AD NA D NG TPLH AA+ G ++ LL G ADP D+ +H P A Sbjct: 182 GDVDVVRVLLERGADPNAKDN--NGQTPLHMAA-----------QEGDVDVVRVLLERG-ADPNAKDN-NGQTPLHMAAHKGDVDV---VRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLEHG-ADPRIADNGRHIPLDYA 343 HSP 4 Score: 64.6994 bits (156), Expect = 6.614e-9 Identity = 59/162 (36.42%), Postives = 80/162 (49.38%), Query Frame = 0 Query: 11 QPGNVDVI-IASEKAFDARRKKKRRNLQQRQHWACSCFNIPNTSEKKEVDLGRLRALLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELL 171 Q G+VDV+ + E+ D K N Q H A K +VD+ R+ L + A +AK + +TPLH+AA + + V VR+LL+ GA P A D G TP H AA KGH VV LL+H AD D PL +A + + I+ LL Sbjct: 213 QEGDVDVVRVLLERGADPNAKDN--NGQTPLHMAA---------HKGDVDVVRV---LLERGADPNAKDN-NGQTPLHMAAHKGHVDV---VRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLEHGADPRIADNGRHIPLDYA----KDSAIRSLL 352
BLAST of EWM20522.1 vs. NCBI_GenBank
Match: gi|1103700679|pdb|5FIN|A (Chain A, Darpins As A New Tool For Experimental Phasing In Protein Crystallography >gi|1103700680|pdb|5FIO|A Chain A, Darpins As A New Tool For Experimental Phasing In Protein Crystallography) HSP 1 Score: 94.3597 bits (233), Expect = 4.809e-21 Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 0 Query: 66 LLTQNKALVHAKGRMDEETPLHIAAAEVRIRVLEAVRLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 +L N A V+A TPLH+AA LE V LL+ GA A D GYTP H AA GH ++VE LLK+ AD NA+D +G+TPLH AA WG ++ LL G AD NAQD TPF +A Sbjct: 32 ILMANGADVNAADNTGT-TPLHLAAYSGH---LEIVECLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHG-ADVNAQDKFGKTPFDLA 153 HSP 2 Score: 80.4925 bits (197), Expect = 1.041e-15 Identity = 46/91 (50.55%), Postives = 53/91 (58.24%), Query Frame = 0 Query: 102 RLLLQAGASPAAVDKAGYTPSHWAAGKGHEKVVEELLKHKADANAVDKNGLTPLHWAAYWGQTACIKELLYKGEADPNAQDHLQHTPFMMA 192 R+L+ GA A D G TP H AA GH ++VE LLKH AD +A D G TPLH AAYWG I E+L K AD NA D TP +A Sbjct: 31 RILMANGADVNAADNTGTTPLHLAAYSGHLEIVECLLKHGADVDASDVFGYTPLHLAAYWGHLE-IVEVLLKNGADVNAMDSDGMTPLHLA 120 The following BLAST results are available for this feature:
BLAST of EWM20522.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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