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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100335g2.5839.mrna |
| Orig protein id | gnl|cribi|Naga_100335g2.5839 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037264.1 | supercontig | KK037264.1:60137..61708 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10179 ID=rna10179|Name=rna10179|organism=Nannochloropsis gaditana|type=mRNA|length=601bp
TAACTACTGGGCAACCAATGCTCGCAGTGGAACATAAGGATGTAGAGTGT
GATGCTACTTAAGCCAGGATTTTCGTGCCACGACTCTTACAGCACGGAGG
ACTGTCACGGGCCCGCCTGTGTGAGCACAGCGGCCGCCCCCCTTTCGATG
TGCCGTGACAGGCTGTTCGACCTTAGGCACCCTTCCCACGGGAGCTTCTG
TCGCAGCATCAGATGCATTAGATGTCTACACATGCACCATGCGACAATTT
GGCTCTGAATGAGGCAACGGCCGCCTGAAATGTACTCCAGGCAGATTTTT
CAATAAATCACCCTCATCCCTCCCTCCCTCCTCCCCCCTCCTCCTCGTTG
CATTTCCGTAGAGCGAGATGTCTCTGCGCTTGGCTATCAAAGCCTCGCTG
GAGTCCACAGAAACTGTGAGTGGGGCGAGCGGAGGTCCTACCAAACCGCC
AGGCCCGTCCTCCCAGAGGCCTCAAGCAGGGCGACAAGTAAGCGGGGCGG
GAGGCACAAGCGCCGGGCGCCGGAAGTCTTGGCCGGAAGACCTCGAGTGC
GAGCGTGGACGATTCCAGCTTGAGCCTCTCCTCTGCTTCGTCCTCTCCTG
A back to topprotein sequence of rna10179 >rna10179-protein ID=rna10179-protein|Name=rna10179|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWV
VDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTL
EQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVV
LGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGL
AVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSASRPP
ANARELAEARAAKFGGPNGPTASSSNENEEETATLLRR back to topmRNA from alignment at KK037264.1:60137..61708+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10179 ID=rna10179|Name=rna10179|organism=Nannochloropsis gaditana|type=mRNA|length=1572bp|location=Sequence derived from alignment at KK037264.1:60137..61708+ (Nannochloropsis gaditana)
ATGGCCTCAAGTGCCCCGCCCTCTGGCGGcacggccccctctcccatcgC
CTCTGTGAAGGAATGGTACCACAATTGGTGCGCCTCCACACCCTTCATCA
CACGCAGCactcttcatctcctccttgccctctatGCACTCTCATGGGTC
GTGGATCTGACGGCATACCTGGCCAACATCCCGTACATGAGCATCTACAA
GCTGCAGCTCTGgcggcctttcctctctcccttttacACCGAGGGCTTGC
TCTCTGTGTTGTTCCTCTGCTTGTccctgggagggatggccACCACGCTC
GAGCAGGTGGGCAGGAGATGGGGTTGAGGGCATGCCTGGGAGGGCCTAAG
AAGAGGCAGAAATGCGGCGATCTTGTCACTATTGCTCAGTCTTACTTGAT
AGACTCACATTTGGTCCGTTTTTCCtgcatttcttccttttccccgccaT
ATTTTCGCTTCCCAGGCCAAGGGCAGTACCTCTTTCCTGTGTCTGATGGc
ggccatctccttcctcacaaacttcctcttcctcctgatctgtctcctcc
tctccgtgctTCAGCCCTCAGCGCTTTACCTCTCGGCAGGATCTTTCTGG
ATCGTCGTTCTTGGCCTTCTGACAGGTGTATATACCGCGAGGGAGCAAGA
CAGGGAGCGAGATGGGGGTTACTAGAGGGTACTAGAGGGTCTGTCGAAGG
GAAAGAGCTAGGcggaagggccgggggaggttTTCGGGCATGACGAGGAC
TTCTATTTCTTAGTCACTCCTATAGACCGAATTCAAGGATCTAGCAAGCT
GTGTGTGCAACATTGAtccaacccttcctccccccctcccccttttttcc
tttcccctctcccagtcGACTGCCTCGCCTCCAACCTCCCTACCCGGCAG
CTCTTCGGCCTGCCCTGTCAgatcccctccctctacttccccctcctcct
cttccttctgttctccctcttcgcgggcccccgcctcgaccTGGGTCTCG
CCGTGGGAGTAGGCTACCTGGTAGGATGGGGCTACCTGGACGtgttgctt
cctccccttgcctgtCTGACCCgatgggaagaggggcgaatTGGCTCGTG
GCTGGGGTCGAGGACGGGGTTTGTGTCTGCGGCAGcagcgaggggggcgg
aggcgtgGTTGCCAAcagtggtgggcgaggggggggggcggggcagaggg
agggagggagggaggcggggtgGCTGGGAGGGGTTTTGGCGTGGCGAGAA
ATCCACCCACGATACATAACGGAggtgggggcgagggggtggggggttCA
AAACtagcgggagggggggcagggggagctGCTTTTCAGGGAAGTGGGCA
AacgttggggggggggggcgggcgcgggcaggaggagcacggGGCTTGCT
AGGACTAGGGGGTGAtgggagcagcagcagtggtAGCAGTGCTTCCAGGC
CCCCCGCCAATGCTCGAGAGCTGGCAGAGGCACGAGCCGCGAAGTTCGGT
GGTCCGAACGGGCCCACGGCGTCCTCTTCGAAcgaaaacgaggaggagac
ggccacGTTACTCCGGCGGTAG back to topCoding sequence (CDS) from alignment at KK037264.1:60137..61708+ >rna10179 ID=rna10179|Name=rna10179|organism=Nannochloropsis gaditana|type=CDS|length=3468bp|location=Sequence derived from alignment at KK037264.1:60137..61708+ (Nannochloropsis gaditana)
ATGGCCTCAAGTGCCCCGCCCTCTGGCGGcacggccccctctcccatcgC
CTCTGTGAAGGAATGGTACCACAATTGGTGCGCCTCCACACCCTTCATCA
CACGCAGCactcttcatctcctccttgccctctatGCACTCTCATGGGTC
GTGGATCTGACGGCATACCTGGCCAACATCCCGTACATGAGCATCTACAA
GCTGCAGCTCTGgcggcctttcctctctcccttttacACCGAGGGCTTGC
TCTCTGTGTTGTTCCTCTGCTTGTccctgggagggatggccACCACGCTC
GAGCAGGCCAAGGGCAGTACCTCTTTCCTGTGTCTGATGGcggccatctc
cttcctcacaaacttcctcttcctcctgatctgtctcctcctctccgtgc
tTCAGCCCTCAGCGCTTTACCTCTCGGCAGGATCTTTCTGGATCGTCGTT
CTTGGCCTTCTGACAGtcGACTGCCTCGCCTCCAACCTCCCTACCCGGCA
GCTCTTCGGCCTGCCCTGTCAgatcccctccctctacttccccctcctcc
tcttccttctgttctccctcttcgcgggcccccgcctcgaccTGGGTCTC
GCCGTGGGAGTAGGCTACCTGGTAGGATGGGGCTACCTGGACGtgttgct
tcctccccttgcctgtCTGACCCgatgggaagaggggcgaatTGGCTCGT
GGCTGGGGTCGAGGACGGGcagcagtggtAGCAGTGCTTCCAGGCCCCCC
GCCAATGCTCGAGAGCTGGCAGAGGCACGAGCCGCGAAGTTCGGTGGTCC
GAACGGGCCCACGGCGTCCTCTTCGAAcgaaaacgaggaggagacggcca
cGTTACTCCGGCGGTAGATGGCCTCAAGTGCCCCGCCCTCTGGCGGcacg
gccccctctcccatcgCCTCTGTGAAGGAATGGTACCACAATTGGTGCGC
CTCCACACCCTTCATCACACGCAGCactcttcatctcctccttgccctct
atGCACTCTCATGGGTCGTGGATCTGACGGCATACCTGGCCAACATCCCG
TACATGAGCATCTACAAGCTGCAGCTCTGgcggcctttcctctctccctt
ttacACCGAGGGCTTGCTCTCTGTGTTGTTCCTCTGCTTGTccctgggag
ggatggccACCACGCTCGAGCAGGCCAAGGGCAGTACCTCTTTCCTGTGT
CTGATGGcggccatctccttcctcacaaacttcctcttcctcctgatctg
tctcctcctctccgtgctTCAGCCCTCAGCGCTTTACCTCTCGGCAGGAT
CTTTCTGGATCGTCGTTCTTGGCCTTCTGACAGtcGACTGCCTCGCCTCC
AACCTCCCTACCCGGCAGCTCTTCGGCCTGCCCTGTCAgatcccctccct
ctacttccccctcctcctcttccttctgttctccctcttcgcgggccccc
gcctcgaccTGGGTCTCGCCGTGGGAGTAGGCTACCTGGTAGGATGGGGC
TACCTGGACGtgttgcttcctccccttgcctgtCTGACCCgatgggaaga
ggggcgaatTGGCTCGTGGCTGGGGTCGAGGACGGGcagcagtggtAGCA
GTGCTTCCAGGCCCCCCGCCAATGCTCGAGAGCTGGCAGAGGCACGAGCC
GCGAAGTTCGGTGGTCCGAACGGGCCCACGGCGTCCTCTTCGAAcgaaaa
cgaggaggagacggccacGTTACTCCGGCGGTAGATGGCCTCAAGTGCCC
CGCCCTCTGGCGGcacggccccctctcccatcgCCTCTGTGAAGGAATGG
TACCACAATTGGTGCGCCTCCACACCCTTCATCACACGCAGCactcttca
tctcctccttgccctctatGCACTCTCATGGGTCGTGGATCTGACGGCAT
ACCTGGCCAACATCCCGTACATGAGCATCTACAAGCTGCAGCTCTGgcgg
cctttcctctctcccttttacACCGAGGGCTTGCTCTCTGTGTTGTTCCT
CTGCTTGTccctgggagggatggccACCACGCTCGAGCAGGCCAAGGGCA
GTACCTCTTTCCTGTGTCTGATGGcggccatctccttcctcacaaacttc
ctcttcctcctgatctgtctcctcctctccgtgctTCAGCCCTCAGCGCT
TTACCTCTCGGCAGGATCTTTCTGGATCGTCGTTCTTGGCCTTCTGACAG
tcGACTGCCTCGCCTCCAACCTCCCTACCCGGCAGCTCTTCGGCCTGCCC
TGTCAgatcccctccctctacttccccctcctcctcttccttctgttctc
cctcttcgcgggcccccgcctcgaccTGGGTCTCGCCGTGGGAGTAGGCT
ACCTGGTAGGATGGGGCTACCTGGACGtgttgcttcctccccttgcctgt
CTGACCCgatgggaagaggggcgaatTGGCTCGTGGCTGGGGTCGAGGAC
GGGcagcagtggtAGCAGTGCTTCCAGGCCCCCCGCCAATGCTCGAGAGC
TGGCAGAGGCACGAGCCGCGAAGTTCGGTGGTCCGAACGGGCCCACGGCG
TCCTCTTCGAAcgaaaacgaggaggagacggccacGTTACTCCGGCGGTA
GATGGCCTCAAGTGCCCCGCCCTCTGGCGGcacggccccctctcccatcg
CCTCTGTGAAGGAATGGTACCACAATTGGTGCGCCTCCACACCCTTCATC
ACACGCAGCactcttcatctcctccttgccctctatGCACTCTCATGGGT
CGTGGATCTGACGGCATACCTGGCCAACATCCCGTACATGAGCATCTACA
AGCTGCAGCTCTGgcggcctttcctctctcccttttacACCGAGGGCTTG
CTCTCTGTGTTGTTCCTCTGCTTGTccctgggagggatggccACCACGCT
CGAGCAGGCCAAGGGCAGTACCTCTTTCCTGTGTCTGATGGcggccatct
ccttcctcacaaacttcctcttcctcctgatctgtctcctcctctccgtg
ctTCAGCCCTCAGCGCTTTACCTCTCGGCAGGATCTTTCTGGATCGTCGT
TCTTGGCCTTCTGACAGtcGACTGCCTCGCCTCCAACCTCCCTACCCGGC
AGCTCTTCGGCCTGCCCTGTCAgatcccctccctctacttccccctcctc
ctcttccttctgttctccctcttcgcgggcccccgcctcgaccTGGGTCT
CGCCGTGGGAGTAGGCTACCTGGTAGGATGGGGCTACCTGGACGtgttgc
ttcctccccttgcctgtCTGACCCgatgggaagaggggcgaatTGGCTCG
TGGCTGGGGTCGAGGACGGGcagcagtggtAGCAGTGCTTCCAGGCCCCC
CGCCAATGCTCGAGAGCTGGCAGAGGCACGAGCCGCGAAGTTCGGTGGTC
CGAACGGGCCCACGGCGTCCTCTTCGAAcgaaaacgaggaggagacggcc
acGTTACTCCGGCGGTAG back to top
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