EWM20523.1, cds10148 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|585100202|gb|EWM20523.1| (hypothetical protein Naga_100335g2 [Nannochloropsis gaditana]) HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSASRPPANARELAEARAAKFGGPNGPTASSSNENEEETATLLRR 288 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSASRPPANARELAEARAAKFGGPNGPTASSSNENEEETATLLRR Sbjct: 1 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSASRPPANARELAEARAAKFGGPNGPTASSSNENEEETATLLRR 288
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|553192779|ref|XP_005855643.1| (hypothetical protein NGA_0645800, partial [Nannochloropsis gaditana CCMP526] >gi|422293409|gb|EKU20709.1| hypothetical protein NGA_0645800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 474.937 bits (1221), Expect = 4.489e-168 Identity = 242/248 (97.58%), Postives = 245/248 (98.79%), Query Frame = 0 Query: 1 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSASR 248 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTG ++A+R Sbjct: 1 MASSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGFVSAAAAR 248
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|219111855|ref|XP_002177679.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410564|gb|EEC50493.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 131.339 bits (329), Expect = 3.263e-32 Identity = 75/218 (34.40%), Postives = 124/218 (56.88%), Query Frame = 0 Query: 23 YHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVL---QPSALYLSAGSFWIVVLGLLTVDCLASNLPT-RQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLG--LAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSW 234 Y ++ +TP +TRS L +L+ Y LSWV+D +ANIP S++ +++R SP S+LF LS +E + GST+F L + L N LFL+ +LL + + + L+ +A W+++ G++ ++C+ + T R LF C+IP++Y+PL LF +F LF G + +++G+GY G+GYLD L P +++WEE + W Sbjct: 25 YEDFRRNTPVVTRSILTVLVLSYLLSWVIDPHFAMANIPQFSVFGFEIYRILTSPLVNTRFFSLLFAFLSFTSQGKRMENSMGSTAFGVLCLTMGVLANVLFLVTNVLLYYVSGGEQAFLFTAAAGIWLILFGIIAMECVQAPRGTQRPLF--FCKIPTIYYPLALFAVFGLF-GQSFSVANLISMGIGYAYGFGYLDGLKPSAPRISQWEETILADW 239
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|1210529193|dbj|GAX12339.1| (hypothetical protein FisN_1Hh272 [Fistulifera solaris]) HSP 1 Score: 111.309 bits (277), Expect = 5.990e-25 Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 0 Query: 13 PSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSF--LCLMAAISFLTNFLFLLICLLLSVL--QPSALYLSAGSFWIVVLGLLTVDCL-ASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFA-GPRLDLGLAVGVGYLVGW 210 P P + Y + STPF+TR+ L + Y +SW D L NIP+ SI + +++R LSP L +++ S LEQ+ GSTSF LCLM LTN LF+ + L VL + S L+ + WI++ G L+++C+ A TR+LF +P LYFP L+LLF L G + G+++G+GY +G+ Sbjct: 8 PPPSNPALQAYEQFSQSTPFVTRTILIVQAVSYIVSWFFDPHYALGNIPHFSILRFEIYRILLSPLVNSSLFALILAFWSFQDHGKRLEQSLGSTSFAWLCLMMGT--LTNLLFIAVSFTLYVLFGKTSFLFQDSSGIWIILFGTLSMECVRAPRGSTRRLF--VVDVPVLYFPFSLYLLFVLMGQGLLMGQGISLGLGYALGF 207
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|223992547|ref|XP_002285957.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977272|gb|EED95598.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 105.531 bits (262), Expect = 9.067e-23 Identity = 92/248 (37.10%), Postives = 133/248 (53.63%), Query Frame = 0 Query: 3 SSAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLSAGS--FWIVVLGLLTVDCLASNLPT-RQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWLGSRTGSSGSSAS 247 S+ PP P+P+ + Y + TP +TR L+ LL Y LS+ + LANIP +I+K +L+R F SP +LS++F + LEQ+ GS F L ++ +N LFLL+ +LL L S YL S W V+L ++ V+C + T R+LF L +P+LY+PL+L LFS+FAG +L L V VGY G+G LD L + +WE G + ++G S SSAS Sbjct: 7 SNGPPQ----PNPVLTA---YEGYVRDTPLLTRYILNSLLLSYLLSFFANPAYALANIPLFTIFKFELYRIFTSPLVCADILSLIFAFMGFMNHGIKLEQSVGSCMFGVLFFTLTVASNVLFLLVSVLLWGLTNSESYLVGASMGIWSVLLAIIAVECSQAPPDTKRKLFFL--TVPTLYYPLVLLALFSMFAGVKLAYCLGVAVGYAYGYGKLDRLKVKVERARKWEGGCLRGFVGRMGWISVSSAS 245
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|298713038|emb|CBJ48813.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 105.916 bits (263), Expect = 1.055e-22 Identity = 61/181 (33.70%), Postives = 102/181 (56.35%), Query Frame = 0 Query: 57 LANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVL--QPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGRIGSWL 235 L N P+ ++ +++R + F + GLL+V+ ++ + LE++ GST L LMA ++ +TN F+ +C +L +L + A Y S+G W +++ L+ V+C+A+ R+ F LP IP Y+PL L +F G +DL AVG+GY G LD L P + L WE G + +++ Sbjct: 21 LNNSPFRTVESFEVYRVVTTVFCSGGLLAVILGLMNFNTVGPNLERSLGSTGLLALMATLTVVTNLAFIALCYVLVILGEKKYAFYSSSG-IWNLLVALIAVECMATPDVPRRFFILPWDIPGKYYPLFLACIFGFMRGAWMDLFCAVGIGYAYADGRLDRLKPSRSRLASWESGCLANFV 200
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|1210520173|dbj|GAX21056.1| (hypothetical protein FisN_1Lh272 [Fistulifera solaris]) HSP 1 Score: 98.2117 bits (243), Expect = 4.193e-20 Identity = 73/202 (36.14%), Postives = 111/202 (54.95%), Query Frame = 0 Query: 13 PSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVL--QPSALYLSAGSFWIVVLGLLTVDCL-ASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFA-GPRLDLGLAVGVGYLVGW 210 P P + Y + STPF+TR+ L + Y +SW D L NIP+ SI + +++R LSP +++ SL LEQ+ GSTSF+ L I LTN LF+ + L VL + S LY + WI++ G L+++C+ A TR+LF + +P LY+PL L+LLF L G + G+++G+GY +G+ Sbjct: 8 PPPSNPAVQAYEQFSQSTPFVTRTILIVQAVSYMVSWFFDPHYALGNIPHFSILRFEIYRILLSPLVNSSFFALILAFWSLQDHGKRLEQSLGSTSFVWLCLMIGTLTNLLFIAVSFTLYVLFGKISFLYQDSSGIWIILFGTLSMECVRAPRGSTRKLFVI--DVPVLYYPLSLYLLFVLMGQGVLMGQGISMGLGYALGF 207
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|551665103|ref|XP_005835314.1| (hypothetical protein GUITHDRAFT_136846 [Guillardia theta CCMP2712] >gi|428179463|gb|EKX48334.1| hypothetical protein GUITHDRAFT_136846 [Guillardia theta CCMP2712]) HSP 1 Score: 88.5817 bits (218), Expect = 1.170e-16 Identity = 63/205 (30.73%), Postives = 94/205 (45.85%), Query Frame = 0 Query: 30 TPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSALYLS----AGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWEEGR 230 +P +TR+ L + L W+VD + L LWR F SPF +G+ VL CL GG+ + E+ G+ +F L I+ N LF L + + P LS A W+ VL L + S P +GL C IP+ ++P L +LF+L L+ + VGY +GYL+ ++P + WE R Sbjct: 21 SPLVTRAVCTLTVWL----WLVD------------VILLPLWRWFTSPFVEQGIFGVLIGCLVFGGIGSQFERMFGTLAFGYLFMVINVSANILFTFAALFFAPILPEMHLLSPLNCANGLWVSVLAFLVIHTQRSPHPFMSFWGL-CNIPTKFYPWFLLILFALLGASVLENLCGILVGYAFQFGYLERVMPSEQKFSSWETSR 208
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|857975860|emb|CEO98039.1| (hypothetical protein PBRA_006152 [Plasmodiophora brassicae]) HSP 1 Score: 87.8113 bits (216), Expect = 2.440e-16 Identity = 64/208 (30.77%), Postives = 105/208 (50.48%), Query Frame = 0 Query: 4 SAPPSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSVLQPSAL-YLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFA-GPRLDLGLAVGVGYLVG 209 +A +GG P + S K+ Y W TP + R+ + + +A LS V N+PY ++ + Q+WR + F LLS +F SL + LE AKGST L A S + F+ +++ L +L S L +L G FW + + ++ AS TRQ P ++P+ +P++L +LF L + G +D+ + + +G L G Sbjct: 10 AADGAGGETPF-LRSAKDGYAKWYHQTPAMARALVFVGVAGSVLSLVGVDRVLGYNMPYYTVLRSQVWRVLTAGFVGRSLLSDVFAIFSLYQILLRLEPAKGSTFVLVTSLAASVVIQFVTVMLLTLAGILLSSMLFFLHGGGFWPLAFVFIALESQASVDATRQFLCFPVEVPTKAYPVVLAVLFFLLSGGSAIDIFVGLALGMLAG 216
BLAST of EWM20523.1 vs. NCBI_GenBank
Match: gi|403333494|gb|EJY65848.1| (Rab GTPase 2b (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 84.3445 bits (207), Expect = 1.145e-14 Identity = 74/274 (27.01%), Postives = 117/274 (42.70%), Query Frame = 0 Query: 7 PSGGTAPSPIASVKEWYHNWCASTPFITRSTLHLLLALYALSWVVDLTAYLANIPYMSIYKLQLWRPFLSPFYTEGLLSVLFLCLSLGGMATTLEQAKGSTSFLCLMAAISFLTNFLFLLICLLLSV-LQPSALYLSAGSFWIVVLGLLTVDCLASNLPTRQLFGLPCQIPSLYFPLLLFLLFSLFAGPRLDLGLAVGVGYLVGWGYLDVLLPPLACLTRWE-----------------EGRIGSWLGSRT-----GSSGSSASRPPANARELA 257 + ++P VK + N FI ST + L+ + + + A+L P M IY LQ+WR F PF LL +LF +S A E+ G+ + L LF++ C L ++ + P + + + W ++ +T++C S R L LP QI S Y+P L +F++F G +LDL + + VGY+ + LD WE +G G RT + S AS+PPA ++ A Sbjct: 9 DASNSSPDMQTQVKNMWENVPTFCRFILISTCSIYLSSFIFAKI---PAFLVTQPLMIIYSLQIWRIFTGPFVHVQLLQLLFGLMSYIPTAMQQEKLDGTVKMAFRFFLNAVLIETLFVVACFLFAMFVNPQFMMMFSIGLWPILFCDITIECNKSPDLARGLCCLPIQIKSKYYPWALLAIFTMFFGLQLDLFVGLAVGYMHIYKALDKFELSTHKAKLWESKLPFKKYAPEPHFVAADGSAGLPTFVRTAPPQQNNQNSRASQPPAQTQQPA 279 The following BLAST results are available for this feature:
BLAST of EWM20523.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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