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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100920g1.1617.mrna |
| Orig protein id | gnl|cribi|Naga_100920g1.1617 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037264.1 | supercontig | KK037264.1:46917..48204 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10172 ID=rna10172|Name=rna10172|organism=Nannochloropsis gaditana|type=mRNA|length=500bp
CCTCCTAGGCTCACGGCTCCTACCAAGCCATCTCGGGTGGGCATGTGGCT
GAGGCGATGCATGACCTAACCTCCTTCCCCTGCGAAATGATCCAGTTTGA
CACCGATGGGTTCGACCGGGAAGCGTTTTGGGCGCGTCTGTGCTCCTTTC
AGGAGGCGGGCTTCACCATGGGGGCGTCCTGCCCGTACTCTCAGGAGGGA
TTGGTCGGCTGTCATGCCTACAGTGTACTTTGTGTTAAGGAACTGAAAGA
CGTCGCGGTCGGTCAGCAGCGGAAGGTGCTGGAGTACTTTGCTCCTCGAA
GCGTTGCAAGCGTGGTGTCGACCAGGGGGAGGGGGGCACAAAGGGCGGGA
GAAGGAGACGATGGTGGCAAGAATGACAGGGCAGGCGTCCATCTACCCTC
CCTCCCCCCCTCCCCCCCTCCTTTCCTCACGGAGGATGGTGTCCTCCGCT
TGGTCCGGCTTCGCAACCCTTGGGGCTGCCGGGAGTGGACCGGCAGGTAA back to topprotein sequence of rna10172 >rna10172-protein ID=rna10172-protein|Name=rna10172|organism=Nannochloropsis gaditana|type=polypeptide|length=172bp
MREVLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGG
FPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKP
AEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEAL
SQNQIQCEDVDKAKGIFAWVKI back to topmRNA from alignment at KK037264.1:46917..48204+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10172 ID=rna10172|Name=rna10172|organism=Nannochloropsis gaditana|type=mRNA|length=1288bp|location=Sequence derived from alignment at KK037264.1:46917..48204+ (Nannochloropsis gaditana)
ATGAGAGAGGTACGATGCAGAGCAGTAGGGTGTGGAAAAAGCGATGAATA
TATAACGAATGAACGACTACAAGGGTGACCAAGCGATCGAATAGCTGAAG
GGCAGAGTTGGGCAGCTTTATTTCActaagagggaaaagaaaagcgaaTT
AGTCagcggaaagggaagagcgtggagggaagagaggaggaggaaaggaa
ggaatgggggaGTAAGATAGGGAGGTTCGGAAGTAGCTTTCTTCTACTAC
GGAGAAAGacgagggggtggaagagtTTCGTCGGACGGTCTCTCTCACCT
CACCTTCCCGTCGCATCATTTgacctctttctttctcatttcctttcctt
ccctccccctttacctccctccttccctccctctttgcccaCCTCCTGCA
GGTTTTGTATCCTACGGACGAGCCCAGCCACTCCCATAGCGTGTTTGTGC
TCGAGCACCTCCTGCGCTCCCTCTGCGACACGGCTTTGTTGAAGGACTCC
AAATATTTTGCCTCCCCCATCGTAACGAAGGCTTTAggcgggtagggagg
gaggtcgagagATGAAGAGAAACGTAGATGGGAAAGAGCTTTCCCTGTTG
GGAATCGGAATGCATCATCTCATTGCAAGCATGTAGTGGGACATGACATG
CGGTTTTCCTATATCCCCTACTTCCAtaacccttcccctcgtgtCCTTGA
TATACCGTCAGCTTCCCAGGTGTGACCTTACGGCGATACGAATGCTCGGG
CGCCTGCGTTGTGGTCTTGGATAATGctttggaggagcaaggccTGTCTG
TCCGGTGTCGCTTTGTTTTGCACACGGGCGATCGGAGCGATTGGGGCTCT
ACGCATAAGCCGGCAGAGGCGCCAGGTACGTgacggggaaaaggaggaag
agagggagggcaggacgAAAAAGATCACCGGTGGGGGGAAATGCGGCTAG
AATCAAAGTCCAGAGGTCCACGGTGGGCGCACGAAGGAGTCGTGcatctt
ctcttccaccatcttccttccctccaacGCCCATTTCATGTCCCAATTCG
ACATTATATTCTAAACTTCCCTTCGCTCGCAGAGTGGCGATTAGTAGGCC
CAGGACACCGGGCTATAGTCGGAGTattgtcttcctcttcccaaaTGGCG
CAATTTGAGCTGGAGGCAATGGGAACGAGTGGGAGTTTTGTCATGGACAG
GATGGAAGTAGAGGCGCTTTCTCAAAACCAGATTCAGTGTGAAGATGTTG
ATAAAGCCAAAGGCATCTTTGCTTGGGTAAAAATTTAG back to topCoding sequence (CDS) from alignment at KK037264.1:46917..48204+ >rna10172 ID=rna10172|Name=rna10172|organism=Nannochloropsis gaditana|type=CDS|length=2076bp|location=Sequence derived from alignment at KK037264.1:46917..48204+ (Nannochloropsis gaditana)
ATGAGAGAGGTTTTGTATCCTACGGACGAGCCCAGCCACTCCCATAGCGT
GTTTGTGCTCGAGCACCTCCTGCGCTCCCTCTGCGACACGGCTTTGTTGA
AGGACTCCAAATATTTTGCCTCCCCCATCGTAACGAAGGCTTTAggcggC
TTCCCAGGTGTGACCTTACGGCGATACGAATGCTCGGGCGCCTGCGTTGT
GGTCTTGGATAATGctttggaggagcaaggccTGTCTGTCCGGTGTCGCT
TTGTTTTGCACACGGGCGATCGGAGCGATTGGGGCTCTACGCATAAGCCG
GCAGAGGCGCCAGAGTGGCGATTAGTAGGCCCAGGACACCGGGCTATAGT
CGGAGTattgtcttcctcttcccaaaTGGCGCAATTTGAGCTGGAGGCAA
TGGGAACGAGTGGGAGTTTTGTCATGGACAGGATGGAAGTAGAGGCGCTT
TCTCAAAACCAGATTCAGTGTGAAGATGTTGATAAAGCCAAAGGCATCTT
TGCTTGGGTAAAAATTTAGATGAGAGAGGTTTTGTATCCTACGGACGAGC
CCAGCCACTCCCATAGCGTGTTTGTGCTCGAGCACCTCCTGCGCTCCCTC
TGCGACACGGCTTTGTTGAAGGACTCCAAATATTTTGCCTCCCCCATCGT
AACGAAGGCTTTAggcggCTTCCCAGGTGTGACCTTACGGCGATACGAAT
GCTCGGGCGCCTGCGTTGTGGTCTTGGATAATGctttggaggagcaaggc
cTGTCTGTCCGGTGTCGCTTTGTTTTGCACACGGGCGATCGGAGCGATTG
GGGCTCTACGCATAAGCCGGCAGAGGCGCCAGAGTGGCGATTAGTAGGCC
CAGGACACCGGGCTATAGTCGGAGTattgtcttcctcttcccaaaTGGCG
CAATTTGAGCTGGAGGCAATGGGAACGAGTGGGAGTTTTGTCATGGACAG
GATGGAAGTAGAGGCGCTTTCTCAAAACCAGATTCAGTGTGAAGATGTTG
ATAAAGCCAAAGGCATCTTTGCTTGGGTAAAAATTTAGATGAGAGAGGTT
TTGTATCCTACGGACGAGCCCAGCCACTCCCATAGCGTGTTTGTGCTCGA
GCACCTCCTGCGCTCCCTCTGCGACACGGCTTTGTTGAAGGACTCCAAAT
ATTTTGCCTCCCCCATCGTAACGAAGGCTTTAggcggCTTCCCAGGTGTG
ACCTTACGGCGATACGAATGCTCGGGCGCCTGCGTTGTGGTCTTGGATAA
TGctttggaggagcaaggccTGTCTGTCCGGTGTCGCTTTGTTTTGCACA
CGGGCGATCGGAGCGATTGGGGCTCTACGCATAAGCCGGCAGAGGCGCCA
GAGTGGCGATTAGTAGGCCCAGGACACCGGGCTATAGTCGGAGTattgtc
ttcctcttcccaaaTGGCGCAATTTGAGCTGGAGGCAATGGGAACGAGTG
GGAGTTTTGTCATGGACAGGATGGAAGTAGAGGCGCTTTCTCAAAACCAG
ATTCAGTGTGAAGATGTTGATAAAGCCAAAGGCATCTTTGCTTGGGTAAA
AATTTAGATGAGAGAGGTTTTGTATCCTACGGACGAGCCCAGCCACTCCC
ATAGCGTGTTTGTGCTCGAGCACCTCCTGCGCTCCCTCTGCGACACGGCT
TTGTTGAAGGACTCCAAATATTTTGCCTCCCCCATCGTAACGAAGGCTTT
AggcggCTTCCCAGGTGTGACCTTACGGCGATACGAATGCTCGGGCGCCT
GCGTTGTGGTCTTGGATAATGctttggaggagcaaggccTGTCTGTCCGG
TGTCGCTTTGTTTTGCACACGGGCGATCGGAGCGATTGGGGCTCTACGCA
TAAGCCGGCAGAGGCGCCAGAGTGGCGATTAGTAGGCCCAGGACACCGGG
CTATAGTCGGAGTattgtcttcctcttcccaaaTGGCGCAATTTGAGCTG
GAGGCAATGGGAACGAGTGGGAGTTTTGTCATGGACAGGATGGAAGTAGA
GGCGCTTTCTCAAAACCAGATTCAGTGTGAAGATGTTGATAAAGCCAAAG
GCATCTTTGCTTGGGTAAAAATTTAG back to top
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