EWM20532.1, cds10141 (CDS) Nannochloropsis gaditana

Overview
NameEWM20532.1
Unique Namecds10141
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:46917..46925 +
Alignment locationKK037264.1:47318..47457 +
Alignment locationKK037264.1:47628..47791 +
Alignment locationKK037264.1:47999..48204 +

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Properties
Property NameValue
Protein idEWM20532.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100920g1.1617.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:46917..46925 +
KK037264.1supercontigKK037264.1:47318..47457 +
KK037264.1supercontigKK037264.1:47628..47791 +
KK037264.1supercontigKK037264.1:47999..48204 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20532.1 vs. NCBI_GenBank
Match: gi|585100216|gb|EWM20532.1| (hypothetical protein Naga_100920g1 [Nannochloropsis gaditana])

HSP 1 Score: 357.836 bits (917), Expect = 4.376e-125
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 
Query:    1 MREVLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI 172
            MREVLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI
Sbjct:    1 MREVLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI 172
[Close]
BLAST of EWM20532.1 vs. NCBI_GenBank
Match: gi|553192785|ref|XP_005855645.1| (hypothetical protein NGA_0646000, partial [Nannochloropsis gaditana CCMP526] >gi|422293411|gb|EKU20711.1| hypothetical protein NGA_0646000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 350.903 bits (899), Expect = 2.120e-122
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    4 VLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI 172
            VLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI
Sbjct:    1 VLYPTDEPSHSHSVFVLEHLLRSLCDTALLKDSKYFASPIVTKALGGFPGVTLRRYECSGACVVVLDNALEEQGLSVRCRFVLHTGDRSDWGSTHKPAEAPEWRLVGPGHRAIVGVLSSSSQMAQFELEAMGTSGSFVMDRMEVEALSQNQIQCEDVDKAKGIFAWVKI 169
The following BLAST results are available for this feature:
BLAST of EWM20532.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585100216|gb|EWM20532.1|4.376e-125100.00hypothetical protein Naga_100920g1 [Nannochloropsi... [more]
gi|553192785|ref|XP_005855645.1|2.120e-122100.00hypothetical protein NGA_0646000, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10172rna10172Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications