rna10168, rna10168 (mRNA) Nannochloropsis gaditana

Overview
Namerna10168
Unique Namerna10168
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length579
Alignment locationKK037264.1:36395..36700 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101500g2.10236.mrna
Orig protein idgnl|cribi|Naga_101500g2.10236
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:36395..36700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101500g2gene9871Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10168rna10168-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20535.1cds10137Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10168 ID=rna10168|Name=rna10168|organism=Nannochloropsis gaditana|type=mRNA|length=579bp
TTCTCCTTGTTATTTCCTATCCGCATCCTCACGCCTATCCTCTCCCTTTC
TCCTCCTTCTTCCTTATCCCTCCTGCCTGCTCCTCCTCTGTCTCTCCTCA
TGTCGCTCTCTACCTCCTTCCCCCTCCCTCCCCATCAATTCCATTTCCTC
CCTCTTCCCTCCTCATCATCCCTTCTCCCCAGTCCCAGCCTCTTCACCAC
CTGGAAATTTCGACCCTATCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCCCCTCTCGCCCGCGCGAG
GTTGAAACCAGGCACTGCATCGACTACATCTTTGTCCTTCCAAACCCATC
ACCCCTCCCTCCTTCTTCTTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCCTTCTTCCAACTCACCTCCTCTCCATCCCTACC
TTAAGTCAAATCGGTCCGCAAGCTCTTCCATGCCCATCATACCCGTCCGA
CCACCTTGCCATCGGGATGCGGTTTCGTTATCTGAGGAAGGATGAAGGGG
GGGAGGGAGGTGCAGGAATTCCGCGATGA
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protein sequence of rna10168

>rna10168-protein ID=rna10168-protein|Name=rna10168|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MRDHCTARGVTEWPAALDSNFQNDVFKGGAKRQEVKQKFLHEKRWGLTDA
LKVTSSRKTNEDTQSTSVAL
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mRNA from alignment at KK037264.1:36395..36700-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10168 ID=rna10168|Name=rna10168|organism=Nannochloropsis gaditana|type=mRNA|length=306bp|location=Sequence derived from alignment at KK037264.1:36395..36700- (Nannochloropsis gaditana)
ATGCGTGACCACTGCACTGCCAGAGGAGTAACGGAATGGCCGGCGGCTCT
AGATTCAAATTTTCAAAATGACGTTTTCAAAGGGGGGGGTTAGATTTGTC
TTGAGAGATCGCAGGTCGCAGTTTCGCACAAGTTGAAGACACCTTAACGT
ATGTGTGAATGTTTGGCATTTTATTTCATAGCAAAACGGCAAGAAGTAAA
ACAGAAATTTCTGCACGAAAAACGGTGGGGGTTGACAGATGCTCTTAAGG
TAACGTCAAGTCGAAAGACCAATGAAGACACGCAATCAACAAGTGTGGCC
CTCTGA
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Coding sequence (CDS) from alignment at KK037264.1:36395..36700-

>rna10168 ID=rna10168|Name=rna10168|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at KK037264.1:36395..36700- (Nannochloropsis gaditana)
CAAAACGGCAAGAAGTAAAACAGAAATTTCTGCACGAAAAACGGTGGGGG
TTGACAGATGCTCTTAAGGTAACGTCAAGTCGAAAGACCAATGAAGACAC
GCAATCAACAAGTGTGGCCCTCTGAATGCGTGACCACTGCACTGCCAGAG
GAGTAACGGAATGGCCGGCGGCTCTAGATTCAAATTTTCAAAATGACGTT
TTCAAAGGGGGGGCAAAACGGCAAGAAGTAAAACAGAAATTTCTGCACGA
AAAACGGTGGGGGTTGACAGATGCTCTTAAGGTAACGTCAAGTCGAAAGA
CCAATGAAGACACGCAATCAACAAGTGTGGCCCTCTGAATGCGTGACCAC
TGCACTGCCAGAGGAGTAACGGAATGGCCGGCGGCTCTAGATTCAAATTT
TCAAAATGACGTTTTCAAAGGGGGGG
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Synonyms
Publications