EWM20535.1, cds10137 (CDS) Nannochloropsis gaditana

Overview
NameEWM20535.1
Unique Namecds10137
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:36613..36700 -
Alignment locationKK037264.1:36395..36519 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20535.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101500g2.10236.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:36613..36700 -
KK037264.1supercontigKK037264.1:36395..36519 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20535.1 vs. NCBI_GenBank
Match: gi|585100223|gb|EWM20535.1| (hypothetical protein Naga_101500g2 [Nannochloropsis gaditana])

HSP 1 Score: 147.132 bits (370), Expect = 6.718e-45
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 
Query:    1 MRDHCTARGVTEWPAALDSNFQNDVFKGGAKRQEVKQKFLHEKRWGLTDALKVTSSRKTNEDTQSTSVAL 70
            MRDHCTARGVTEWPAALDSNFQNDVFKGGAKRQEVKQKFLHEKRWGLTDALKVTSSRKTNEDTQSTSVAL
Sbjct:    1 MRDHCTARGVTEWPAALDSNFQNDVFKGGAKRQEVKQKFLHEKRWGLTDALKVTSSRKTNEDTQSTSVAL 70
The following BLAST results are available for this feature:
BLAST of EWM20535.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100223|gb|EWM20535.1|6.718e-45100.00hypothetical protein Naga_101500g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10168rna10168Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications