rna10146, rna10146 (mRNA) Nannochloropsis gaditana

Overview
Namerna10146
Unique Namerna10146
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1733
Alignment locationKK037263.1:62021..62637 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100728g1.1134.mrna
Orig protein idgnl|cribi|Naga_100728g1.1134
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:62021..62637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100728g1gene9849Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10146rna10146-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20559.1cds10115Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10146 ID=rna10146|Name=rna10146|organism=Nannochloropsis gaditana|type=mRNA|length=1733bp
CCCGCCTGTCTCTTCCCAGGAACGAGAGAGCCTTTCCTCAGGCCTCGGGT
GCGGCGAGGTCCGTCCCTCCCCATCCTCCCTCCCTCCCTCCCCCCCTTCT
TCGCGCGGTGCTTCCCTTTCCCCTCTGGACACTTCCTTCCTTCTCAGCCC
TTCATGGCTGTCGTTTTCTTGTCAATATATGCGACAGAGGCTTTCTTTTT
CTTGTCAATATATACGACAAAGGGGCGTGTTCCCTTTATACCCGATGCCC
TCGGGTTTGATGGGGATCCCCCCCTCCCTCCCTCCTTATGCCCTCCTATT
CACTCGATATCCCCCCTACTTTCCTTTCTTTCTTCTTTGAGAATCTTCTC
TACCTTTCCTCCCCCCTCTATTCCTTCTCCCTGAGGTCTCTCCGCCCATG
TCCTCCCTCCTCTCCTTTTCTTCCTCTTGCCCCCATCCCTCGGTGACGCG
TGGAATATCTTCCCTGCCTTTATTTTCTTGGAATACCGCCTCTCCCTATG
TGTCGTTCTTATCCCATTTTTTAAAAAATGCTTTTCCTCTTCCTTTCCTC
CACTCCCTCCTCCCTCAGCACTCAGATTACGGGTGTCTGACCCTCCTGAA
CATGGATGAGTCGACGCAGGCGTTACAGGCCCGCAACACCCAGGGTGCAT
GGATCTTCGCCGACCCCATTCCGGGTACCCTTTTGGTCAACATCGGTGAC
ATGCTCTCCAGATGGTCGAACGGGAAATTCAAAAGCACGCCACACCGTGT
CCTCCCCGCAGTGGGAAAGGCTCGAATCTCCATTCCATTTTTCTTTGAGC
CCAATTTGGACACCCTGGTGGTGCCTCTGCGTGAATGCGAGAACTACGCC
CGAGCGCACGGGAAGATTTACTCCTCCGTCCTGTTTGCCGATCATTTGCG
CTCGAAAGTCACGAATAACTTTTCCTTTTTGGAGCCGAGTCCGACTGCAA
CGCCACTGACCGGGTCAAAGGTCCACACTGTTGACGGAAAGGGAAGCGAA
AGACACTGATGGTTAGACACGGTGTCAATAGGCGACTTATACAGACTGTA
GCTGGGAGAAGGAGGTGACAATAAAAATGTAACTAAGGCACCTGCAACAG
TCTCTCATTGCTTATCGATGTGTAAAAGGCATGAAGGCATGTATAATTTG
CCTATAAACTTTGAGTCTTTCGCTCGCATATGGGCAACGTTTTCTCTAAA
ATTTCTTGTTCGATATCTCATCAAATTGGTATGCTACGTTTACGTGGTCA
TGCGGTGTGATTGGGATTCTTAAAATGGCTAATGGCTATCACGTGGCTGA
AGCGTGTGTTTTGAGGTCATTCCGGAGTCGAGTACGAGTATGCTGGACTG
ATCCTATATGATCAGCTGGAGAGTTAAGAAACACGGGGGGGCATCGGACT
TCTGATGCAGTAGGCACGTCTTTGTCGCCATCTGACAGGAGTAGGCCGCA
CTTGTCCTAGCTGTGTCTCCTCAAATCGTCAATTATATCAACATAGACTA
CTACGCTGTGTAGAATTTGTAAGTGATGCGCAACCCATCCAGAATCAGAA
TGAAACGATCTATGAACAATATGAACGACCACACAAGGCGCTGTTTGAGT
CCCAGTTGCACCAAGTATGAAGAGGCGCCGATGATGCCGGAGGCAGAAGC
CAAAGGGTTGCGGTACGTAACATCCTATGTTGAGCAACAAAGCGATTAAG
AGCCATGCAATAGAAAGTCAACCATGACTATCC
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protein sequence of rna10146

>rna10146-protein ID=rna10146-protein|Name=rna10146|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MLLPASLFPFLHISQTSSKLVNDSKKYKWGAKKLSMMALYHQYAPFLLMG
GIALLCLAVICVRSHPAYFAKTSELYESANLRM
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mRNA from alignment at KK037263.1:62021..62637-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10146 ID=rna10146|Name=rna10146|organism=Nannochloropsis gaditana|type=mRNA|length=617bp|location=Sequence derived from alignment at KK037263.1:62021..62637- (Nannochloropsis gaditana)
ATGCTGCTGCCAGCCTCTCTCTTCCCTTTCCTTCGTGTCCTGACTTTACT
TTCCTCTTGAGCACCGTCCAATTACTTACTGTCTTGGACCAGTTTGTTCC
TACCCCCTTTGCTCAGCCTCTTATCCCCTTCAGACATCTCACAGACCTCC
TCCAAGCTCGTCAACGACTCCAAGAAATACAAATGGGGCGCGAAAAAACT
CTCCATGATGGTATGAAGGAACTGCATGGGAGGGAATAGACCAGAAAAAG
AAGGGACGAAAGGCGAGAGGGGGAAAAAGTTTGTCGTGGCGTTGCATCGA
GCGTAAAGTGCAGTGTGGTGCATGAAGTGGATCACAGACTTGAAAATGTA
TTCACGCATTCTCTCTTCTCTCTTTCTCTCCTGTCTTGACCCTCCTTCTT
TCCTGCACATCCTTCCGTTGTCGTGCCCCTCACAGGCGTTGTACCATCAA
TACGCCCCTTTCCTCCTTATGGGGGGCATCGCCCTACTTGTCTTATATTT
GAAATTTTTTTGGTGAAGGGTCATGAGTAGTGCCTAGCCGTAATTTGTGT
CCGCTCTCATCCTGCTTACTTTGCAAAAACTTCAGAGCTCTATGAGTCGG
CAAACTTAAGAATGTAA
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Coding sequence (CDS) from alignment at KK037263.1:62021..62637-

>rna10146 ID=rna10146|Name=rna10146|organism=Nannochloropsis gaditana|type=CDS|length=1008bp|location=Sequence derived from alignment at KK037263.1:62021..62637- (Nannochloropsis gaditana)
TGCCTAGCCGTAATTTGTGTCCGCTCTCATCCTGCTTACTTTGCAAAAAC
TTCAGAGCTCTATGAGTCGGCAAACTTAAGAATGTAAGCGTTGTACCATC
AATACGCCCCTTTCCTCCTTATGGGGGGCATCGCCCTACTTACATCTCAC
AGACCTCCTCCAAGCTCGTCAACGACTCCAAGAAATACAAATGGGGCGCG
AAAAAACTCTCCATGATGATGCTGCTGCCAGCCTCTCTCTTCCCTTTCCT
TCTGCCTAGCCGTAATTTGTGTCCGCTCTCATCCTGCTTACTTTGCAAAA
ACTTCAGAGCTCTATGAGTCGGCAAACTTAAGAATGTAAGCGTTGTACCA
TCAATACGCCCCTTTCCTCCTTATGGGGGGCATCGCCCTACTTACATCTC
ACAGACCTCCTCCAAGCTCGTCAACGACTCCAAGAAATACAAATGGGGCG
CGAAAAAACTCTCCATGATGATGCTGCTGCCAGCCTCTCTCTTCCCTTTC
CTTCTGCCTAGCCGTAATTTGTGTCCGCTCTCATCCTGCTTACTTTGCAA
AAACTTCAGAGCTCTATGAGTCGGCAAACTTAAGAATGTAAGCGTTGTAC
CATCAATACGCCCCTTTCCTCCTTATGGGGGGCATCGCCCTACTTACATC
TCACAGACCTCCTCCAAGCTCGTCAACGACTCCAAGAAATACAAATGGGG
CGCGAAAAAACTCTCCATGATGATGCTGCTGCCAGCCTCTCTCTTCCCTT
TCCTTCTGCCTAGCCGTAATTTGTGTCCGCTCTCATCCTGCTTACTTTGC
AAAAACTTCAGAGCTCTATGAGTCGGCAAACTTAAGAATGTAAGCGTTGT
ACCATCAATACGCCCCTTTCCTCCTTATGGGGGGCATCGCCCTACTTACA
TCTCACAGACCTCCTCCAAGCTCGTCAACGACTCCAAGAAATACAAATGG
GGCGCGAAAAAACTCTCCATGATGATGCTGCTGCCAGCCTCTCTCTTCCC
TTTCCTTC
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Synonyms
Publications