rna10143, rna10143 (mRNA) Nannochloropsis gaditana

Overview
Namerna10143
Unique Namerna10143
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length255
Alignment locationKK037263.1:53331..53879 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101901g1.8992.mrna
Orig protein idgnl|cribi|Naga_101901g1.8992
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:53331..53879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101901g1gene9846Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10143rna10143-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20563.1cds10112Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10143 ID=rna10143|Name=rna10143|organism=Nannochloropsis gaditana|type=mRNA|length=255bp
ATGCATGTGTGTGTACGCGGGAGAAAAGAGGATGGGGATGTAGAGCACGT
CCGATTTGGGTCGAAGAGTGAGGAGGGGAGAGGTATGATCCAGCCTGAGA
GCCCGCCAGATGAGAATTTGACGCTGGAAGGAAGAAAATCAGAATGTTGC
CGCGATCAGCCCGACCAATCGGGTGACGCTTGTCCGGTTGGGTGGACCGT
TTCTTTCAATTTTGCTTTTTTAAAAAAAAAAAAATCGTCCCACAGTCGTC
GGTGA
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protein sequence of rna10143

>rna10143-protein ID=rna10143-protein|Name=rna10143|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MREKVHLSSTVTKLQSRNEVLETQLVKRFEQFENLNAKLADNEKELVKLK
EGERRRKYLELENERLRVFLRQRKESGKAGGRG
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mRNA from alignment at KK037263.1:53331..53879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10143 ID=rna10143|Name=rna10143|organism=Nannochloropsis gaditana|type=mRNA|length=549bp|location=Sequence derived from alignment at KK037263.1:53331..53879- (Nannochloropsis gaditana)
TCCCTCTCTCCCACAGAATGTTGCCCTCATGCGCGAAAAAGTCCACCTTT
CCTCGACCGTTACCAAGCTGCAAAGCCGAAACGAGGTGTTGGAAACCCAA
CTAGTGAAACGGTTCGAGCAGTTTGAAAATTTGAACGCCAAGCTCGCCGA
CAACGAAAAGGAATTGGTGAAGCTCAAGGAGGGAGAGCGGCGGAGAAAGG
TGAAAATGGAGGGTGGGAGGGAGGAGGGAAGAAGGAAGGGAGGGAAAGGA
GGGGGGGGAAGGGAGGAGAAAAGGAGGTAGTGAAGGAGGGAGGGAAGGAG
GGAGGGGTTGGTATGGCTTTCCATGTTGCTTGACGCGCAAATTTGGTGAG
ACATGCGTCTTAATCGCAATATCTCCCTCATTATTTGCTGTCTCCCTTCC
TCCTTCCCCACCTCCTTCCTTCCCTTCCGTTCGCCCTCCCTCTTGCCCTC
CCTCCCGCCCTCCCTCAGTACTTGGAACTGGAAAATGAGCGGCTCCGGGT
ATTTTTGCGTCAACGAAAGGAATCGGGGAAGGCAGGAGGAAGAGGCTGA
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Coding sequence (CDS) from alignment at KK037263.1:53331..53879-

>rna10143 ID=rna10143|Name=rna10143|organism=Nannochloropsis gaditana|type=CDS|length=504bp|location=Sequence derived from alignment at KK037263.1:53331..53879- (Nannochloropsis gaditana)
TACTTGGAACTGGAAAATGAGCGGCTCCGGGTATTTTTGCGTCAACGAAA
GGAATCGGGGAAGGCAGGAGGAAGAGGCTGAATGCGCGAAAAAGTCCACC
TTTCCTCGACCGTTACCAAGCTGCAAAGCCGAAACGAGGTGTTGGAAACC
CAACTAGTGAAACGGTTCGAGCAGTTTGAAAATTTGAACGCCAAGCTCGC
CGACAACGAAAAGGAATTGGTGAAGCTCAAGGAGGGAGAGCGGCGGAGAA
AGTACTTGGAACTGGAAAATGAGCGGCTCCGGGTATTTTTGCGTCAACGA
AAGGAATCGGGGAAGGCAGGAGGAAGAGGCTGAATGCGCGAAAAAGTCCA
CCTTTCCTCGACCGTTACCAAGCTGCAAAGCCGAAACGAGGTGTTGGAAA
CCCAACTAGTGAAACGGTTCGAGCAGTTTGAAAATTTGAACGCCAAGCTC
GCCGACAACGAAAAGGAATTGGTGAAGCTCAAGGAGGGAGAGCGGCGGAG
AAAG
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Synonyms
Publications