EWM20563.1, cds10112 (CDS) Nannochloropsis gaditana

Overview
NameEWM20563.1
Unique Namecds10112
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:53681..53851 -
Alignment locationKK037263.1:53331..53411 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20563.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101901g1.8992.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:53681..53851 -
KK037263.1supercontigKK037263.1:53331..53411 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20563.1 vs. NCBI_GenBank
Match: gi|585100274|gb|EWM20563.1| (hypothetical protein Naga_101901g1 [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 1.979e-49
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MREKVHLSSTVTKLQSRNEVLETQLVKRFEQFENLNAKLADNEKELVKLKEGERRRKYLELENERLRVFLRQRKESGKAGGRG 83
            MREKVHLSSTVTKLQSRNEVLETQLVKRFEQFENLNAKLADNEKELVKLKEGERRRKYLELENERLRVFLRQRKESGKAGGRG
Sbjct:    1 MREKVHLSSTVTKLQSRNEVLETQLVKRFEQFENLNAKLADNEKELVKLKEGERRRKYLELENERLRVFLRQRKESGKAGGRG 83
The following BLAST results are available for this feature:
BLAST of EWM20563.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100274|gb|EWM20563.1|1.979e-49100.00hypothetical protein Naga_101901g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10143rna10143Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications