rna10142, rna10142 (mRNA) Nannochloropsis gaditana

Overview
Namerna10142
Unique Namerna10142
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length315
Alignment locationKK037263.1:53025..53322 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101901g2.8991.mrna
Orig protein idgnl|cribi|Naga_101901g2.8991
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:53025..53322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101901g2gene9845Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10142rna10142-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20562.1cds10111Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10142 ID=rna10142|Name=rna10142|organism=Nannochloropsis gaditana|type=mRNA|length=315bp
ATGTATCAAGGAAGAGGAACAGAGGGGAATAAAGAATTGACGAGTATCAA
GCAGGGGAGAGAGATTGGATATCCCATGGCGAGGCAGGGCAACAGACTGA
GGGTAAAGAGACAGCGATGGAGCGGTTCTGTACAGAAAAAAAGGTTGAAA
ACTCGTTTTATGTGGGTGGATGATGTGATCGTAGTCAGGAACGCCCGGGT
CCCCCACATTATATCTCCCTTCCTGAAGGGAGATCTATCAGAGTTTGAAT
TTGAATTCAAAAGTTTAAATGTGTCCGAAGCAAAGCAGGGAGACACGGGT
GACAGAGACAAGTGA
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protein sequence of rna10142

>rna10142-protein ID=rna10142-protein|Name=rna10142|organism=Nannochloropsis gaditana|type=polypeptide|length=84bp
MHVCVRGRKEDGDVEHVRFGSKSEEGRGMIQPESPPDENLTLEGRKSECC
RDQPDQSGDACPVGWTVSFNFAFLKKKKSSHSRR
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mRNA from alignment at KK037263.1:53025..53322+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10142 ID=rna10142|Name=rna10142|organism=Nannochloropsis gaditana|type=mRNA|length=298bp|location=Sequence derived from alignment at KK037263.1:53025..53322+ (Nannochloropsis gaditana)
ATGCATGTGTGTGTACgcgggagaaaagaggatgGGTGTGTGAATAATTG
AGTCACGGGGATATGGCTGCAGTTGCAGGGATGTAGAGCACGTCCGATTT
GGGTCGaagagtgaggaggggagaggtaTGATCCAGCCTGAGAGCCCGCC
AGATGAGAATTTGACgctggaaggaagaaaatcaGAATGTTGCCGCGATC
AGCCCGACCAATCGGGTGACGCTTGTCCGGTTGGGTGGACCGTTTCTTTC
AATTTtgcttttttaaaaaaaaaaaaatcgtcCCACAGTCGTCGGTGA
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Coding sequence (CDS) from alignment at KK037263.1:53025..53322+

>rna10142 ID=rna10142|Name=rna10142|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at KK037263.1:53025..53322+ (Nannochloropsis gaditana)
ATGCATGTGTGTGTACgcgggagaaaagaggatgGGGATGTAGAGCACGT
CCGATTTGGGTCGaagagtgaggaggggagaggtaTGATCCAGCCTGAGA
GCCCGCCAGATGAGAATTTGACgctggaaggaagaaaatcaGAATGTTGC
CGCGATCAGCCCGACCAATCGGGTGACGCTTGTCCGGTTGGGTGGACCGT
TTCTTTCAATTTtgcttttttaaaaaaaaaaaaatcgtcCCACAGTCGTC
GGTGAATGCATGTGTGTGTACgcgggagaaaagaggatgGGGATGTAGAG
CACGTCCGATTTGGGTCGaagagtgaggaggggagaggtaTGATCCAGCC
TGAGAGCCCGCCAGATGAGAATTTGACgctggaaggaagaaaatcaGAAT
GTTGCCGCGATCAGCCCGACCAATCGGGTGACGCTTGTCCGGTTGGGTGG
ACCGTTTCTTTCAATTTtgcttttttaaaaaaaaaaaaatcgtcCCACAG
TCGTCGGTGA
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Synonyms
Publications