EWM20562.1, cds10111 (CDS) Nannochloropsis gaditana

Overview
NameEWM20562.1
Unique Namecds10111
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:53025..53059 +
Alignment locationKK037263.1:53103..53322 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20562.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101901g2.8991.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:53025..53059 +
KK037263.1supercontigKK037263.1:53103..53322 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20562.1 vs. NCBI_GenBank
Match: gi|585100273|gb|EWM20562.1| (hypothetical protein Naga_101901g2 [Nannochloropsis gaditana])

HSP 1 Score: 174.866 bits (442), Expect = 1.464e-55
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 
Query:    1 MHVCVRGRKEDGDVEHVRFGSKSEEGRGMIQPESPPDENLTLEGRKSECCRDQPDQSGDACPVGWTVSFNFAFLKKKKSSHSRR 84
            MHVCVRGRKEDGDVEHVRFGSKSEEGRGMIQPESPPDENLTLEGRKSECCRDQPDQSGDACPVGWTVSFNFAFLKKKKSSHSRR
Sbjct:    1 MHVCVRGRKEDGDVEHVRFGSKSEEGRGMIQPESPPDENLTLEGRKSECCRDQPDQSGDACPVGWTVSFNFAFLKKKKSSHSRR 84
The following BLAST results are available for this feature:
BLAST of EWM20562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100273|gb|EWM20562.1|1.464e-55100.00hypothetical protein Naga_101901g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10142rna10142Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications