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Properties
| Property Name | Value |
|---|
| Product | Cobalamin biosynthesis CobW |
| Orig transcript id | gnl|cribi|Naga_100599g1.9557.mrna |
| Orig protein id | gnl|cribi|Naga_100599g1.9557 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037263.1 | supercontig | KK037263.1:47552..48148 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10138 ID=rna10138|Name=rna10138|organism=Nannochloropsis gaditana|type=mRNA|length=788bp
TGAAATAAATTTTGTTCTTAAAACCAGTGATAATCCCAACGGAACGATTT
GGACGTAAACAAATATGCTCACGAGACCGTCTTGGTCAGCGGTTCTTGCA
TATACTTCCGTGTGTGCAGTTAATGAGGTTGTTGGCTGTAGTCAGTAACT
CCCTCTCAAGACTCCTTACCATGATCAACGTTTCCTCTTGTTCCTATCCT
CTATTCATCGCATGGGGCGACTGCCTTGCTCCCATGCTCACCCTGAGGGC
CAAATTGCTCTACACAATACATACTCTCTCACGTGCAAGTATGAAAGCTT
TGACTTTAGGTGTTAAAGGCTATGGCCGCATGTAGTACCTTCACCCTACT
AGGGAGGGGCTATCTTAACCTCCCTCCTCTGACGACTTTCTCACAGACAT
CATGGGTTTGAAAGACCGGTTGCTGGAAAAAATCTGGGGCCAGGAAAGAG
ATTTGCGGGTGAAGGCATGGGTCTTTGGGGGCGTTGCGCTGATTTCCTGT
GGAGTGTCTTCTTTTTACTCCTACAGTTTTATCAAACGCTTCATGCTCTC
CCATTTGCTTCGAAATGTTCCCAATCGGCGGCTGGCTGACATGAAAGAAG
GGGAATACGTCAAAGTGACGGGGAGGATAAGCGTTGTTAGGCCTGGGGGG
GGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGAGGAGGAGA
GGGTGCAACGGCACAGACAGTGCCTGTCGAGGTTCAGGTAAGGAAGAAAG
GGGGGCAAGAGAGAGGGAAGGGACGGAAAGAGAGATAG back to topprotein sequence of rna10138 >rna10138-protein ID=rna10138-protein|Name=rna10138|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MPETDEFGVTSFCYRRRRPFHPARLHALLFGEGGEDVEREGGREGGTEGG
QAGPAEGPLGSLIRVKGYLWLATHMQHMVFWSLAGSVHSFTANEEEKWLA
AIDPVEWPETLTAAELRAHWEPMWGDRRQEIVFIGVHMEQAKVEEALDAC
LLTEEEMTRMTPGDWAEVFVDPFVREGTDGRDDESELGSEGEDELGDD back to topmRNA from alignment at KK037263.1:47552..48148+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10138 ID=rna10138|Name=rna10138|organism=Nannochloropsis gaditana|type=mRNA|length=597bp|location=Sequence derived from alignment at KK037263.1:47552..48148+ (Nannochloropsis gaditana)
ATGCCGGAAACGGACGAATTCGGAGTGACGAGCTTCTGTTACCGCCGTCG
TCGGCCTTTTCACCCGGCCCGGCTCCATGCCTTGCTGtttggggagggag
gcgaggatgtagagagggaaggagggagggagggcgggacggagggcggg
caggcggGTCCGGCCGAAGGACCCCTTGGTTCCCTCATCCGTGTCAAGGG
TTACCTGTGGCTGGCCACACACATGCAACATATGGTGTTCTGGTCCTTGG
CGGGCAGCGTGCACAGTTTCACggcgaacgaggaggaaaaatggtTGGCC
GCCATTGACCCGGTGGAATGGCCCGAGACCCTGACGGCAGCCGAGCTCCG
GGCGCATTGGGAGCCCATGTGGGGGGACCGACGGCAGGAAATCGTCTTCA
TTGGGGTTCACATGGAGCaggcgaaggtggaggaggccttggacgcgTGT
TTattgacggaggaggaaatgacgcGCATGACTCCGGGGGACTGGGCGGA
GGTCTTTGTGGACCCTTTTGTAAGGGAGGGCACGGACGGGCGTGACGACG
AGAGCGAGCTTGGGAgcgagggtgaggatgaGCTGGGGGATGATTGA back to topCoding sequence (CDS) from alignment at KK037263.1:47552..48148+ >rna10138 ID=rna10138|Name=rna10138|organism=Nannochloropsis gaditana|type=CDS|length=597bp|location=Sequence derived from alignment at KK037263.1:47552..48148+ (Nannochloropsis gaditana)
ATGCCGGAAACGGACGAATTCGGAGTGACGAGCTTCTGTTACCGCCGTCG
TCGGCCTTTTCACCCGGCCCGGCTCCATGCCTTGCTGtttggggagggag
gcgaggatgtagagagggaaggagggagggagggcgggacggagggcggg
caggcggGTCCGGCCGAAGGACCCCTTGGTTCCCTCATCCGTGTCAAGGG
TTACCTGTGGCTGGCCACACACATGCAACATATGGTGTTCTGGTCCTTGG
CGGGCAGCGTGCACAGTTTCACggcgaacgaggaggaaaaatggtTGGCC
GCCATTGACCCGGTGGAATGGCCCGAGACCCTGACGGCAGCCGAGCTCCG
GGCGCATTGGGAGCCCATGTGGGGGGACCGACGGCAGGAAATCGTCTTCA
TTGGGGTTCACATGGAGCaggcgaaggtggaggaggccttggacgcgTGT
TTattgacggaggaggaaatgacgcGCATGACTCCGGGGGACTGGGCGGA
GGTCTTTGTGGACCCTTTTGTAAGGGAGGGCACGGACGGGCGTGACGACG
AGAGCGAGCTTGGGAgcgagggtgaggatgaGCTGGGGGATGATTGA back to top
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