rna10137, rna10137 (mRNA) Nannochloropsis gaditana

Overview
Namerna10137
Unique Namerna10137
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length543
Alignment locationKK037263.1:38142..39132 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101222g2.1130.mrna
Orig protein idgnl|cribi|Naga_101222g2.1130
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:38142..39132 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101222g2gene9840Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10137rna10137-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20567.1cds10106Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10137 ID=rna10137|Name=rna10137|organism=Nannochloropsis gaditana|type=mRNA|length=543bp
ATGGGGGGGCTCTCAGAGGAAGGGGGAGGAGAAGAGGGAGGGGTAGAGGA
AGGGAAGGAGGAGGGGGGAGGCGCACAGACCACACTTTCTGATGGAACAA
ATTTGGGGTTAAAAGGGGATATAAACAGAAAGAGAGGGAGAGAGAGAGAA
CGAGGGAAAAAGAAATGCTTCCAGAGGGTCTTGGCAGAAGAAACCACTTT
TAGAGTAGAGTACCTCATTAGTTACAAAAAATCTCCGTGGGACGCGAGGT
CTCAATCCCTTTGCCCGCACGGGAAAGAAAGGGATTCGAACTCCGGGTGG
CAAAAGAATCGGGGCTTTTGCCACCGTCCGTGCCGAGCGTCGAATGTGGG
AAGGGAAGCGCGGGAATACGAGGGAAGGGAAGGCACAGAGGGCGATAGGA
AGAAAAGGAGGAGCGAGGAGGGCGATCAATCCTGTTTCATGACGGTAGAA
TCGCCTTCCGGCTTTCCGTCCAACATTCAGCACAGGCATACGCCACCACA
TGTTTTTATTAAATTAAAGGGAAAAAAAAACTTTAGCCTGTAA
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protein sequence of rna10137

>rna10137-protein ID=rna10137-protein|Name=rna10137|organism=Nannochloropsis gaditana|type=polypeptide|length=128bp
MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLS
HLLRNVPNRRLADMKEGEYVKVTGRISVVRPGGGGGGGGGGGGGGRGGGE
GATAQTVPVEVQVRKKGGQERGKGRKER
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mRNA from alignment at KK037263.1:38142..39132-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10137 ID=rna10137|Name=rna10137|organism=Nannochloropsis gaditana|type=mRNA|length=991bp|location=Sequence derived from alignment at KK037263.1:38142..39132- (Nannochloropsis gaditana)
TGAAATAAATTTTGTTCTTAAAACCAGTGATAATCCCAACGGAACGATTT GGACGTAAACAAATATGCTCACGAGACCGTCTTGGTCAGCGGTTCTTGCA TATACTTCCGTGTGTGCAGTTAATGAGGTTGTTGGCTGTAGTCAGTAACT CCCTCTCAAGACTCCTTACCATGATCAACGTTTCCTCTTGTTCCTATCCT CTATTCATCGCATGGGGCGACTGCCTTGCTCCCATGCTCACCCTGAGGGC CAAATTGCTCTACACAATACATACTCTCTCACGTGCAAGTATGAAAGCTT TGACTTTAGGTGTTAAAGGCTATGGCCGCATGTAGTACCTTCACCCTACT AGGGAGGGGCTATCTTAACCTCCCTCCTCTGACGACTTTCTCACAGACAT CATGGGTTTGAAAGACCGGTTGCTGGAAAAAATCTGGGGCCAGGAAAGAG ATTTGCGGGTGAAGGCATGGGTCTTTGGGGGCGTTGCGCTGATTTCCTGT GGAGTGTCTTCTTTTTACTCCTACAGGTGAGGCACGATAGCTTGGGTTCG GGGTGTGAGAGAGGGTCGGCCCCGCTGGTATGACATCTGTGATATTCATG ACATGGCAAGCTACAGCATACAAACATGAATGATAATAAAGGAAGCGCGT GTGCTGGCTTGTCTGGGCTATATTTGTTCCTTCATCCCTCCCTCCTGCAC TCTTTCCCGGTTTGCCTTCCATGTTTCAGTTTTATCAAACGCTTCATGCT CTCCCATTTGCTTCGAAATGTTCCCAATCGGCGGCTGGCTGACATGAAAG AAGGGGAATACGTCAAAGTGACGGGGAGGATAAGCGTTGTTAGGCCTGGG GGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGAGGAGG AGAGGGTGCAACGGCACAGACAGTGCCTGTCGAGGTTCAGGTAAGGAAGA AAGGGGGGCAAGAGAGAGGGAAGGGACGGAAAGAGAGATAG
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Coding sequence (CDS) from alignment at KK037263.1:38142..39132-

>rna10137 ID=rna10137|Name=rna10137|organism=Nannochloropsis gaditana|type=CDS|length=774bp|location=Sequence derived from alignment at KK037263.1:38142..39132- (Nannochloropsis gaditana)
TTTTATCAAACGCTTCATGCTCTCCCATTTGCTTCGAAATGTTCCCAATC
GGCGGCTGGCTGACATGAAAGAAGGGGAATACGTCAAAGTGACGGGGAGG
ATAAGCGTTGTTAGGCCTGGGGGGGGGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGGAGGGGAGGAGGAGAGGGTGCAACGGCACAGACAGTGCCTG
TCGAGGTTCAGGTAAGGAAGAAAGGGGGGCAAGAGAGAGGGAAGGGACGG
AAAGAGAGATAGATGGGTTTGAAAGACCGGTTGCTGGAAAAAATCTGGGG
CCAGGAAAGAGATTTGCGGGTGAAGGCATGGGTCTTTGGGGGCGTTGCGC
TGATTTCCTGTGGAGTGTCTTCTTTTTACTCCTACAGTTTTATCAAACGC
TTCATGCTCTCCCATTTGCTTCGAAATGTTCCCAATCGGCGGCTGGCTGA
CATGAAAGAAGGGGAATACGTCAAAGTGACGGGGAGGATAAGCGTTGTTA
GGCCTGGGGGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGG
GGAGGAGGAGAGGGTGCAACGGCACAGACAGTGCCTGTCGAGGTTCAGGT
AAGGAAGAAAGGGGGGCAAGAGAGAGGGAAGGGACGGAAAGAGAGATAGA
TGGGTTTGAAAGACCGGTTGCTGGAAAAAATCTGGGGCCAGGAAAGAGAT
TTGCGGGTGAAGGCATGGGTCTTTGGGGGCGTTGCGCTGATTTCCTGTGG
AGTGTCTTCTTTTTACTCCTACAG
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Synonyms
Publications