EWM20567.1, cds10106 (CDS) Nannochloropsis gaditana

Overview
NameEWM20567.1
Unique Namecds10106
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:38607..38731 -
Alignment locationKK037263.1:38142..38403 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20567.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101222g2.1130.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:38607..38731 -
KK037263.1supercontigKK037263.1:38142..38403 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM20567.1 vs. NCBI_GenBank
Match: gi|585100283|gb|EWM20567.1| (hypothetical protein Naga_101222g2 [Nannochloropsis gaditana])

HSP 1 Score: 248.054 bits (632), Expect = 3.632e-83
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTGRISVVRPGGGGGGGGGGGGGGRGGGEGATAQTVPVEVQVRKKGGQERGKGRKER 128
            MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTGRISVVRPGGGGGGGGGGGGGGRGGGEGATAQTVPVEVQVRKKGGQERGKGRKER
Sbjct:    1 MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTGRISVVRPGGGGGGGGGGGGGGRGGGEGATAQTVPVEVQVRKKGGQERGKGRKER 128
[Close]
BLAST of EWM20567.1 vs. NCBI_GenBank
Match: gi|553193524|ref|XP_005855794.1| (hypothetical protein NGA_0631200, partial [Nannochloropsis gaditana CCMP526] >gi|422293270|gb|EKU20570.1| hypothetical protein NGA_0631200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 155.606 bits (392), Expect = 2.874e-47
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 
Query:    1 MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTG 74
            MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTG
Sbjct:    1 MGLKDRLLEKIWGQERDLRVKAWVFGGVALISCGVSSFYSYSFIKRFMLSHLLRNVPNRRLADMKEGEYVKVTG 74
The following BLAST results are available for this feature:
BLAST of EWM20567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585100283|gb|EWM20567.1|3.632e-83100.00hypothetical protein Naga_101222g2 [Nannochloropsi... [more]
gi|553193524|ref|XP_005855794.1|2.874e-47100.00hypothetical protein NGA_0631200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10137rna10137Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications