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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100699g2.5783.mrna |
| Orig protein id | gnl|cribi|Naga_100699g2.5783 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037263.1 | supercontig | KK037263.1:21196..22680 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10131 ID=rna10131|Name=rna10131|organism=Nannochloropsis gaditana|type=mRNA|length=1896bp
ATGGCCTTTAATACGTCTCCCGTCCTGCCCACGGTGCCCCCGCCGATCCA
CCCATCTTTCACCGATGCTCACGACGAGGACACGGTGGATAAATGGGTGC
ACCGTCTCCCTGACATGATTCGACTCACGGGTCGTCATCCTTTCAATGCC
GAGCCGGATACAAAAGCATTGGTGAACCAAGGATTCATCACCCCCGCGGC
CATGCACTATGTCCGAAACCATGGTCCTGTCCCCCAGTTGAGCTGGGAAA
GTCACCGGATCACCGTGTCGGGCGTGGGTGTCCCCCAGCCTCACACTTTC
AGTATGGACGAGCTCCTCTCCCTCCCTCAGCGCACCTTACCCGTCACCTT
GGTATGCGCGGGAAACCGGCGGAAGGAAGTGAATGTGCATAGGAAGAGCA
AAGGATTCAATTGGGGGGCAGGAGCCGTCAGCAATTCCTTGTGGACCGGC
GTGCCCCTCCATGTCCTCCTGGAGCAGTGCGGCCTGAATGCCCGGGATCT
ACCTCCGGGTAGTTATTGGGTGAATTTTGATGGGCCAGACGGAGAGCTGC
CCAAGGGGGTCTACGGCACGAGCATCCCCCTCCGCAAGGCGTTGGACCCT
GCTCAGGACGTGCTCGTCGCGCACAAGCAGAACCACGAGCCTCTGATGCC
CGACCACGGGTTCCCGGTCCGCATGATCATCCCGGGCTACATCGGGGGCC
GCATGATCAAATGGTTGACCCGGATAACCATCAGCCACGAGCCCTCCCAA
TCCTTCTACCATTACCACGACAACCGCGTCCTACCCTCCTCGGTCGACCA
GGAACGGGCGGATCGGGAAGACTGGTGGCGGAAACCAGAGTATATCATCA
ACGACCTCAATTTGAATTCTGCCATCACTCACCCGAGTCACAACGAGGAG
ATTCCTCTTCTTGAGAACGGCACCTACAAGATTCAGGGGTATGCCTACTG
CGGCGGGGGCCGTCGAGTGCACCGCGTGGAGGTCTCCTTGGACGACGGCC
AGTCGTGGGAACTGGTCGAGATGAGCAAAGAGGAGTACCCAACCGAACAT
GGACGTTTCTGGTCCTGGCGCCTTTGGCATTTGGATGTCGACGTCTTGCG
TCTGGCGAGTGGCAAAAGCGTGGCCTGCCGGGCTTGGGATGACTCACAGA
ACACGCAGCCCCGGGACCTGACATGGAACGTCCTCGGAATGATGAACAAC
AGCTGGTTCCGTCTCAAAACTTCCCTCCATCGGAACACGCAGCAACAACT
TGTCCTCCACGTCCATCACCCCGCCCCCATCGGCTCCTTAGGTTGGATGG
AAAAAGGCACGGGCGTTACGGCGATGGCCCCTGGGAAAGAGCAAGGGGGT
GCGCAGCACGTGGAGGAGAAATCGATCCCAGTCCGAGAAATACGCAAGGA
CCTGCCCGCAATCTCTTCGACGGAGCTCGCGAGGCACAAATCCAGGACGG
ACTGTTGGATCGCGATTAAAGGCCTCGTTTACAATGTGACGCCCTACCTG
AAAGAGCACCCGGGAGGTGTGGGTGCCATCGTCATGAACGGAGGAAAAGA
CGCCACGGAGGACTTTGAGGCAATCCATTCCCGGACGGCGTGGCGCATGC
TGGACAAGTACCTGGTGGGCGTCTTGAGCCCGTCCTCCCCCGGCACCTCC
TCCCCGCCCTCCCTCCGCACCAGCGGGGGCGCCCCCGCCTCCATCCCCGC
GGCGAAAGTAGCGCTGCAAGGAAAAGGAAAAAAACTGAAATGCAAGCTCC
TTGAGAAAGAGTACGCAGCTCCAGACGTGCTCCGCCTGAAATTTGCCCTG
CCCCACGGGAACGCCACCTTAGGGGAAACGGGTGATGAGGCAGTACACGC
CTGTCTCCAAGGGAGATGCCAAGGGTCACGTGGAACTCCTGGTTAA back to topprotein sequence of rna10131 >rna10131-protein ID=rna10131-protein|Name=rna10131|organism=Nannochloropsis gaditana|type=polypeptide|length=210bp
MRSKDGNLGATFLAMRRCMSDKKRTKADHHSRDGRKGERKGGREGARVLL
TRLPPLLYDHGLCSNILQTGETVALHVVEDEGIDLAHVVPAVPVLVLLVV
QEGNLPCDGEGNRWGGRKGGREGGREGGRENLKASADGSVSRWVLVASFG
GLQAPCLSPSLPPSLPPSLPPPFHLGHAGEADGLLHVGNIHSVVEAEPSQ
SLPPGGKRKG back to topmRNA from alignment at KK037263.1:21196..22680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10131 ID=rna10131|Name=rna10131|organism=Nannochloropsis gaditana|type=mRNA|length=1485bp|location=Sequence derived from alignment at KK037263.1:21196..22680+ (Nannochloropsis gaditana)
TGCCAGGCTATCCAGACGACGGTCAGATTATGCGGCAATTAATGCCTGGT
CGGGCAGCGTTCTTGGAGGATCGCCTCTTCAATTCTTATAGTGGTTGTTC
ACGCCCTTTTAGTGCTTGGAGTTGATCGCTCTCCTAAACTCTGATCGTGG
TTGTTCACGCCCTTGTAGGATAGATGTTAATCAATGGGACATATAAAGAG
ATTATTCCAAGCTTTGCGCTCTTATCATTTCTTCTGCTTGTGATCAAAGC
TATTGATTTGACTCCTTAGTGGAGGTATCAATTACCATTTAAATTTCATA
GGACAAAAAAACAAAGGAAAGTGCTAACCATTCAGAGAAATTCAAAAGGA
AGATCTATTCCACATTGCTAGTCATCGTGGAATTATGACGTATGCAGAAA
TGGCAAAGTtgatcctccttttcatcctgcGTATAGACTATCTTCAAGAT
GTGCAAGAAATAATAACACTTCGCCTGGGCGACGATTTGAAAAACACGCT
TTCAGGTCAACTTCGCAGTGACCTCATCTGTGCTTGATTTGTCAGATTTA
CTTTCAGAGCGAGCTTATCTTCACCCTCCATGTTTTTCTCGATCGCTGAG
CTTTCCTTCTGCGAAttgctccccttccaaccTATTTCCCTGCGCGATTC
TATGTCCTACCACGCTCTGCACTGCGTACAGTGCTCTCTCAATCCGTGTT
GAAGAGTTCAATCATCGTCCGATCGGCGCTGACCCGGAAAACGTCAGCCT
CCACATAGAAATCCAGCATCTCCCGTAATTGTTCTGTGGGAGAAAcgacg
gaagaaaaggaaagggggagaaagcagaCGATGAGAACGACGTGAGAAGC
CAAAAATGCGATCGAAGGACGGCAATTTGGGAGCGACTTTCTTAGCAATG
AGACGGTGCATGAGCGACAAGAAACGGACGAAAGCGGACCACCATtcgag
ggacgggaggaagggagagaggaagggagggagggagggcgcacGCGTGC
TTCTTACccgtcttccaccccttctgTACGACCATGGCCTCTGCTCGAAT
ATACTCCAGACGGGCGAGACGGTGGCTTTGCATGTAgtcgaggatgaggg
aatAGACCTTGCTCATGTCGTCCCGGCTGTCCCggttctcgtcctcctcg
tcgtccaggaGGGAAATCTGCCGTGTGATGGCGAAGGGAacaggtgggga
gggaggaaaggaggaagggaaggagggagggaaggagggagggagaacct
TAAGGCCTCGGCGGATGGCAGTGTCTCCCGGTGGGTGCTTGTCGCCAGTT
TTGGTGGCCTGCAAGCTccatgcctctctccctccctccctccctccctc
cctccctccctccctcctcccttccaccttggACATGCGGGTGAGGCgga
tggcctcctccacgtcggcaACATTCACAGTGTCGTCGAAGCGGAGCCGA
GCCAGAGCCTACCAcccggaggaaagaggaaggga back to topCoding sequence (CDS) from alignment at KK037263.1:21196..22680+ >rna10131 ID=rna10131|Name=rna10131|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at KK037263.1:21196..22680+ (Nannochloropsis gaditana)
ATGCGATCGAAGGACGGCAATTTGGGAGCGACTTTCTTAGCAATGAGACG
GTGCATGAGCGACAAGAAACGGACGAAAGCGGACCACCATtcgagggacg
ggaggaagggagagaggaagggagggagggagggcgcacGCGTGCTTCTT
ACccgtcttccaccccttctgTACGACCATGGCCTCTGCTCGAATATACT
CCAGACGGGCGAGACGGTGGCTTTGCATGTAgtcgaggatgagggaatAG
ACCTTGCTCATGTCGTCCCGGCTGTCCCggttctcgtcctcctcgtcgtc
caggaGGGAAATCTGCCGTGTGATGGCGAAGGGAacaggtggggagggag
gaaaggaggaagggaaggagggagggaaggagggagggagaacctTAAGG
CCTCGGCGGATGGCAGTGTCTCCCGGTGGGTGCTTGTCGCCAGTTTTGGT
GGCCTGCAAGCTccatgcctctctccctccctccctccctccctccctcc
ctccctccctcctcccttccaccttggACATGCGGGTGAGGCggatggcc
tcctccacgtcggcaACATTCACAGTGTCGTCGAAGCGGAGCCGAGCCAG
AGCCTACCAcccggaggaaagaggaaggga back to top
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