EWM20574.1, cds10100 (CDS) Nannochloropsis gaditana

Overview
NameEWM20574.1
Unique Namecds10100
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:22051..22680 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20574.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100699g2.5783.mrna
GbkeyCDS
End range.
End range22680
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:22051..22680 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20574.1 vs. NCBI_GenBank
Match: gi|585100300|gb|EWM20574.1| (hypothetical protein Naga_100699g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 417.927 bits (1073), Expect = 1.286e-147
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 
Query:    1 MRSKDGNLGATFLAMRRCMSDKKRTKADHHSRDGRKGERKGGREGARVLLTRLPPLLYDHGLCSNILQTGETVALHVVEDEGIDLAHVVPAVPVLVLLVVQEGNLPCDGEGNRWGGRKGGREGGREGGRENLKASADGSVSRWVLVASFGGLQAPCLSPSLPPSLPPSLPPPFHLGHAGEADGLLHVGNIHSVVEAEPSQSLPPGGKRKG 210
            MRSKDGNLGATFLAMRRCMSDKKRTKADHHSRDGRKGERKGGREGARVLLTRLPPLLYDHGLCSNILQTGETVALHVVEDEGIDLAHVVPAVPVLVLLVVQEGNLPCDGEGNRWGGRKGGREGGREGGRENLKASADGSVSRWVLVASFGGLQAPCLSPSLPPSLPPSLPPPFHLGHAGEADGLLHVGNIHSVVEAEPSQSLPPGGKRKG
Sbjct:    1 MRSKDGNLGATFLAMRRCMSDKKRTKADHHSRDGRKGERKGGREGARVLLTRLPPLLYDHGLCSNILQTGETVALHVVEDEGIDLAHVVPAVPVLVLLVVQEGNLPCDGEGNRWGGRKGGREGGREGGRENLKASADGSVSRWVLVASFGGLQAPCLSPSLPPSLPPSLPPPFHLGHAGEADGLLHVGNIHSVVEAEPSQSLPPGGKRKG 210
The following BLAST results are available for this feature:
BLAST of EWM20574.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100300|gb|EWM20574.1|1.286e-147100.00hypothetical protein Naga_100699g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10131rna10131Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications