rna10123, rna10123 (mRNA) Nannochloropsis gaditana

Overview
Namerna10123
Unique Namerna10123
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length786
Alignment locationKK037263.1:1..527 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101989g1.5697.mrna
Orig protein idgnl|cribi|Naga_101989g1.5697
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:1..527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101989g1gene9826Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10123rna10123-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20580.1cds10092Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10123 ID=rna10123|Name=rna10123|organism=Nannochloropsis gaditana|type=mRNA|length=786bp
TCCTCCTCCCCGCCCTCCCTCCCGCCCTCCCTCCCCACTCCTCCTCCTGG
AGACCCTTGGCGGACGAATCGCCAGAGGGAGGGAGGGAGGGCGAGCAGGG
AGCCCCCCCCACCACTCCCTTCCCATGCGTCCTCTCCCGCCCTTCCTCCC
TCCCTCCCTCGGCCCCGCCCTCCCCCCCTCCCTCAGCTCCAGCAGGCCGC
CCGCCTCCTTCAAGGAGCCTTCCAGCTCCAGCTCTTCGGCTTCGACGTGA
TCGTCCCGACTTACGGGGAGGGAGAGAGGGAGGGAGATGAGGGAGGGAGG
GAGGGAGGGTGGGAGGCGGAGTTGGTAGTGGTGGATGTGAACTTCTTCCC
CTCGTTCAAGGAGGTGGAGGACTTCCCCGCGCGTCTGCGAGCGTTCCTGA
GAGAGAGGGCAGGAGGGAGGAGGGGGGGGACATAAGGAGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGAATCGAAGGAGCGACACTTCCCGCAG
AGACCAGGGGTCAGAGAAGCTGAAAGAGGAGAGAGAGAAGGCTCTGAATA
AATGTGATGCATTCGGTGTGTGTGAGGAATATGCGTTTGGTGAAAAGGCG
GTGTGTAAAAGTGATGCATTTGGAGTGTGTGAGGAGGAGGAAAGGACGTC
GGGGGGGGTAGGACGTTCCCTCTCCCCAGTGTTAGGAACAGAGCGCATAC
CGACAAGCCGAGGCCGAGAACGATACGGAGGAACACATTGAACATAAAGC
TTTGGAAGCCGTGCCGTTGCGACGTGTCTAATTTCT
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protein sequence of rna10123

>rna10123-protein ID=rna10123-protein|Name=rna10123|organism=Nannochloropsis gaditana|type=polypeptide|length=81bp
MEEKKQQQQQQASSLPPSLPPSQEKTEDRTDKVAEAERIAAELLAEEGGG
SGKGKGGKEGGKEGGLANSGAGKGKKKTPKA
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mRNA from alignment at KK037263.1:1..527+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10123 ID=rna10123|Name=rna10123|organism=Nannochloropsis gaditana|type=mRNA|length=527bp|location=Sequence derived from alignment at KK037263.1:1..527+ (Nannochloropsis gaditana)
TCCCACAGAGGAAACCCTCCGCCGAGTCGACCAAAGAACGGCTCAAgcag
aaaatggaagagaagaaacaacagcaacagcagcaagcgtcctccctccc
tccctccctccctccctcccaggagaagacggaggacagGACAGacaagg
taggagggaaggagggagggagggagggagggaaagacgactTGGCGGCA
AAGGTAGAGTAGAGAGGGGAgagtagggaaggagggagggcaggagggag
ggaggaaggaggagcaagaggtaTTCTGTGCCCTTCCAACCAGGCTTCGG
TGTCGTCATACTTGCCTTTAATTCTTTTGtttgctgccctcccctcccct
cccccccctccctccctccctccctaggtggcggaggcagaACGGATCGC
AGCGGAGTTGTTAGCagaagagggcggaggtagcgggaaagggaaaggag
ggaaggagggagggaaggagggcgggctggcGAACAGCGGGgccgggaaa
gggaagaagaagacgccaAAGGCATag
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Coding sequence (CDS) from alignment at KK037263.1:1..527+

>rna10123 ID=rna10123|Name=rna10123|organism=Nannochloropsis gaditana|type=CDS|length=492bp|location=Sequence derived from alignment at KK037263.1:1..527+ (Nannochloropsis gaditana)
atggaagagaagaaacaacagcaacagcagcaagcgtcctccctccctcc
ctccctccctccctcccaggagaagacggaggacagGACAGacaaggtgg
cggaggcagaACGGATCGCAGCGGAGTTGTTAGCagaagagggcggaggt
agcgggaaagggaaaggagggaaggagggagggaaggagggcgggctggc
GAACAGCGGGgccgggaaagggaagaagaagacgccaAAGGCATagatgg
aagagaagaaacaacagcaacagcagcaagcgtcctccctccctccctcc
ctccctccctcccaggagaagacggaggacagGACAGacaaggtggcgga
ggcagaACGGATCGCAGCGGAGTTGTTAGCagaagagggcggaggtagcg
ggaaagggaaaggagggaaggagggagggaaggagggcgggctggcGAAC
AGCGGGgccgggaaagggaagaagaagacgccaAAGGCATag
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Synonyms
Publications