EWM20580.1, cds10092 (CDS) Nannochloropsis gaditana

Overview
NameEWM20580.1
Unique Namecds10092
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:54..149 +
Alignment locationKK037263.1:378..527 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20580.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101989g1.5697.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:54..149 +
KK037263.1supercontigKK037263.1:378..527 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20580.1 vs. NCBI_GenBank
Match: gi|585100312|gb|EWM20580.1| (hypothetical protein Naga_101989g1 [Nannochloropsis gaditana])

HSP 1 Score: 150.214 bits (378), Expect = 6.545e-46
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 
Query:    1 MEEKKQQQQQQASSLPPSLPPSQEKTEDRTDKVAEAERIAAELLAEEGGGSGKGKGGKEGGKEGGLANSGAGKGKKKTPKA 81
            MEEKKQQQQQQASSLPPSLPPSQEKTEDRTDKVAEAERIAAELLAEEGGGSGKGKGGKEGGKEGGLANSGAGKGKKKTPKA
Sbjct:    1 MEEKKQQQQQQASSLPPSLPPSQEKTEDRTDKVAEAERIAAELLAEEGGGSGKGKGGKEGGKEGGLANSGAGKGKKKTPKA 81
The following BLAST results are available for this feature:
BLAST of EWM20580.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100312|gb|EWM20580.1|6.545e-46100.00hypothetical protein Naga_101989g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10123rna10123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications