rna10114, rna10114 (mRNA) Nannochloropsis gaditana

Overview
Namerna10114
Unique Namerna10114
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length682
Alignment locationKK037262.1:77771..79003 -

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Properties
Property NameValue
Productribosomal protein l30
Orig transcript idgnl|cribi|Naga_101276g1.5794.mrna
Orig protein idgnl|cribi|Naga_101276g1.5794
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:77771..79003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101276g1gene9817Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10114rna10114-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20590.1cds10083Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10114 ID=rna10114|Name=rna10114|organism=Nannochloropsis gaditana|type=mRNA|length=682bp
TTTGGGAGGAAGGACCGCGCCTCTTGTCCGGCACGCAGCACGCTGACTCT
GACGCATCGACGCTACCTTTTCTCAGCATCCACATGGCAGCGTCCAACCC
GCTGGCGACCGTGCCCCCGGCGTTGAAGAAGATTACGGTCTTCATGCGGC
GCGCCGAGGAGCTGGACCGAGACACTTCGCACCCGGACTCAAAGCTGGTG
GCCTACTACTGCCGGACACATGCCATGGACCAAGCTATGCTCCTGCGGAC
GCCCGAGAACAGCAAGGAGCTGATGCCCTTCCTGGTTGCCCTCATGGACC
GCCTGGAAGAGGACAAGAAGAGCCTGCCCGCCCAGTCGCCGGCCGAGGCC
AAGGGCGTGGTCGAGGCTTTCGCGGATCGCGTCCTCCAGAAAGCGGACGA
GGTGAGAGCCGGAGCCCGAGCCGGGCGTCTCGGCGTCTCCTCGGTCACCT
CTTCTTGAACCCCCTCCCTTTCCCGGACAGGACGACCAGCTCGGGGTCTG
GGACAAGGACACGGCCAAAGTCTTCTACGCCGCGGGGATTTTCTACGAGG
CGATGGAGCAGTTCAAGGAGCTGGCGGGTCCGGAGGTGGAGAGGAAGCGA
AAGTACTGCAAGTGGAAGGCCTCCGACATCTTGAACGCGCTCAAGGAGGG
CCGTACCCCCACGCAGGGCGGGGGCTTGTCCG
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protein sequence of rna10114

>rna10114-protein ID=rna10114-protein|Name=rna10114|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MEALTYFFSFFPGLISLPSQVGAVIGMAPTAKKSKKAIESINSRLQLVMK
SGKASLGYKETLKTLRNNKAVVVIISSNCPPLRKSEIEYYAMLSKTETIL
YNGSNTDLGTACGKYYRVSVLSVTNPGDSDILPSE
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mRNA from alignment at KK037262.1:77771..79003-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10114 ID=rna10114|Name=rna10114|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp|location=Sequence derived from alignment at KK037262.1:77771..79003- (Nannochloropsis gaditana)
GCCCAGTGGATGGACACCAAAAGGTTCTCAAAAAGGAAGGCGCGCACGGA
GGTCGCTGTGACGTCCAAAGAGACTGGCATGGCAACGCCATTGCTTTTTG
GGGGAGGCCGGATTGCCTTCAGCCCTCCCCCGCCACTCGCTCCTCCCACC
CTTCGCTGCCCCCCCCCCAAAAGCAGTGTCCTGGCCCAGACACACCAAGT
CACACGAGTTTGCGACATCTCCTGTCGACTCTCTTGTTGTGATCACAATA
TTTGATTCTGCTGGGCGGGTAGCGCAGGCGCCGCCAGTATTTGTGGGCTT
GATGAGTACTTGTGTGGCGCTGGCTGGAGTATGGAGGCACTCACTTACTT
CTTCTCTTTCTTTCCTGGTTTGATCTCTCTTCCCTCACAGGTCGGCGCAG
TCATAGGCATGGCACCAACAGCGAAGAAATCGGTACGTGCAATTCGTGGC
TGACGCGCGAGTACTCGACGGGTCGGGAGAGGAAGGAAACTTTGTCGTGT
GGATGGGGAGGAGGCAGGGCGGACGAGCCCTGGGAGCTGTCCGGGGGACA
AGCACTTGGAAGGCACGCTCGAGCAACGTGAAGGCGCTCGAGCATGGAAA
ATGTCCGCAGGGAACTTGAAGGCGCTCGAGGCAGTGGTGCGGGTGTCTGG
GCGTGCGACAGGGACGAGTCAGGCCCTTGTCTCCCTCGGTCTCCCCGCCC
TCTCACCCCGTTTCCCTTCCCCTCGCCCGACGCACAGAAAAAGGCCATCG
AGTCCATCAACTCGCGTCTGCAGCTGGTGATGAAGTCGGGTAAGGCCTCG
CTAGGATACAAGGAGACCCTCAAGACTCTCCGCAACAACAAGGCGGTGGT
GGTCATCATCAGCAGCAACTGCCCCCCTTTGCGTAAGTCGGAGATCGAGT
ACTACGCCATGCTCAGCAAGACCGAGACCATCCTCTACAACGGCTCCAAC
ACGGACCTGGGCACGGCCTGCGGGAAGTACTACCGCGTCTCGGTCCTCTC
GGTCACCAATCCGGGGGACTCGGACATCTTGCCTTCCGAGTGAGGCGGGA
GCTTGCCGGGGAGGGCGCGGGGAGGGCGCGGTCACGGCTGAGGGGGAGCG
AGGGGAGGTTCAGGCCCGGCCCTGGGGTGTGGGGGCTGTGAAAAGAAAGA
GACGAGGCCGTCCGAGCCCCCCCTTGCAAGAGGGAAAACACCGAGCTTGC
CGCCTTTTTATTATTTTCTTGCCCTGTCTGCGT
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Coding sequence (CDS) from alignment at KK037262.1:77771..79003-

>rna10114 ID=rna10114|Name=rna10114|organism=Nannochloropsis gaditana|type=CDS|length=816bp|location=Sequence derived from alignment at KK037262.1:77771..79003- (Nannochloropsis gaditana)
AAAAAGGCCATCGAGTCCATCAACTCGCGTCTGCAGCTGGTGATGAAGTC
GGGTAAGGCCTCGCTAGGATACAAGGAGACCCTCAAGACTCTCCGCAACA
ACAAGGCGGTGGTGGTCATCATCAGCAGCAACTGCCCCCCTTTGCGTAAG
TCGGAGATCGAGTACTACGCCATGCTCAGCAAGACCGAGACCATCCTCTA
CAACGGCTCCAACACGGACCTGGGCACGGCCTGCGGGAAGTACTACCGCG
TCTCGGTCCTCTCGGTCACCAATCCGGGGGACTCGGACATCTTGCCTTCC
GAGTGAATGGAGGCACTCACTTACTTCTTCTCTTTCTTTCCTGGTTTGAT
CTCTCTTCCCTCACAGGTCGGCGCAGTCATAGGCATGGCACCAACAGCGA
AGAAATCGAAAAAGGCCATCGAGTCCATCAACTCGCGTCTGCAGCTGGTG
ATGAAGTCGGGTAAGGCCTCGCTAGGATACAAGGAGACCCTCAAGACTCT
CCGCAACAACAAGGCGGTGGTGGTCATCATCAGCAGCAACTGCCCCCCTT
TGCGTAAGTCGGAGATCGAGTACTACGCCATGCTCAGCAAGACCGAGACC
ATCCTCTACAACGGCTCCAACACGGACCTGGGCACGGCCTGCGGGAAGTA
CTACCGCGTCTCGGTCCTCTCGGTCACCAATCCGGGGGACTCGGACATCT
TGCCTTCCGAGTGAATGGAGGCACTCACTTACTTCTTCTCTTTCTTTCCT
GGTTTGATCTCTCTTCCCTCACAGGTCGGCGCAGTCATAGGCATGGCACC
AACAGCGAAGAAATCG
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Synonyms
Publications