rna10102, rna10102 (mRNA) Nannochloropsis gaditana

Overview
Namerna10102
Unique Namerna10102
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1194
Alignment locationKK037262.1:49954..50640 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101288g1.7671.mrna
Orig protein idgnl|cribi|Naga_101288g1.7671
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:49954..50640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101288g1gene9805Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20602.1cds10071Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10102rna10102-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10102 ID=rna10102|Name=rna10102|organism=Nannochloropsis gaditana|type=mRNA|length=1194bp
CCCTCCGCGGGGCAGGTGGCCATGCGGGTGCGACGTCTGATGAGAGGCAA
AGCGTGGTGTGACGGGTGGCGTAGCTGTGGTTGGATTTTTCGGAGCCACA
AGGGGGGAGGGAGGGGGCGTCAGGGCAGTGGTGGGTGGTGGGAAAAGAAA
AAGTGGTTGCCCAGAGCAAGCGACGAGTCAAATACCTGTATATCCCACGA
AAAATAGAGGGGTTGACGCGGGCGGTGATGGCGAGTGCCATGCCATGCAT
CGGGCGGGGGAGGACTCGTGTCGTTGATGTTGGTGTGTAATGATGCATTG
CAATATCAGGCATCATCCCTATTCATGCGGCATACGGGCAAGTTGTGTCC
GTGGTCGAGACATGCCGGGCACGCGTGGCAAGCGCCACAGCACCCTCCCA
CATCATAAAGACGTCGAAGAACGCGTGATTTTGCGAATGTGGAATGTTTC
TGCGCAGGAAGGGGGTGGTTGCGGCATAGTTGCCCGTAGTAAAAGCAGCC
CCCCCCCCCTTTCTGTCTTTCTGCTTTGTGTCCCTCTTTCTTTCTACGCA
CTAAACTTCCTCCCTTTCCCCCCCTTCCCTCTCCCGTTCCCGTACCGCAG
CCACGCCGCCAGCGCACGGCGCCTCCACCCTTTGCCATGTCCTCGCTCCG
GCACGACGACGAGGAAGTGGATTTCGACGAGGAAGGCGAGAGGGGCGGGG
GGGACATCACCTCCTCCCTCGACCCGGAGGGCCATCCCCCTCCTTCCTCC
TCCTCCTCCTACCCGCCCCGGGCCCTGAAAAAACGCAAAAGCGAGGGCCA
GACGTCGTTGCACGTCAAAGGGCGCGGGCACCGAAGCCAAGAGGAGCGCG
GGGAGGGCGGGAGGCCGCCCTCGTTCGAGGTCTTGGGAGGGGAGGGAGGA
GGGGAAGGGGGTGCCGCCAAGTCGATCGAGGGGTGGGTGATAATGGTCAC
GGGCTTGCACGAGGAGGCGCAGGAGGACGAAGTGGTGGACCGTTTCGGGG
AGTTCGGGGAGGTCCGGAACGTGCAGATGAACCTGGACAGACGGACGGGC
TTCGTCAAAGGGTACGCCCTGGTTGAATTCACCTTAAGAAAGGAGGCGGA
GGCAGCGATCGAGGGGATGGAGGGGGAGGAGATGTACGGAAAAGACGTGC
GGGTGGACTGGGCCTTCATGCAGGAGGCATCAGGGCGATGAGGA
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protein sequence of rna10102

>rna10102-protein ID=rna10102-protein|Name=rna10102|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp
MGRERDLLPSLPPAFSLLLLLALLPSAHLFVLPSASGACAGGALRRRARR
FHFSLPPPPRTSSLLLPPSPSSLLLPPSPSSLLLPPFPSSLLPRVSYPLP
SSASIALFLPLPSRPSPPLVPSLPPIPPSFPPSLSPSLPFLPLSLPTLPP
SSSPSSQAF
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mRNA from alignment at KK037262.1:49954..50640-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10102 ID=rna10102|Name=rna10102|organism=Nannochloropsis gaditana|type=mRNA|length=687bp|location=Sequence derived from alignment at KK037262.1:49954..50640- (Nannochloropsis gaditana)
GGAGGTCGAGCGAGGCTTAACCCCGCCCTCTCTCCCTCCCACTCCGCAAA
AATAAGCACTCTCACCCCACGCCACGACCCCACACGCGCATTATTCCCAA
GCCAGCGATCGCCGTGTCTGCCAACGACGGGGATCTGCCGGTGATAGCGT
CCTTTGAAGGTCGTGTTGGTTGGGTTGTCGAAAAGTGGTGGTCTTTCCCA
CAGCGAGATGGGGCGTGAACGCGACCTCCTTCCCTCCCTCCCTCCCGCCT
TCTCCCTCCTCCTCCTCCTTGCCCTCCTACCATCCGCCCACCTTTTCGTT
TTGCCTTCGGCATCAGGTGCGTGTGCTGGTGGCGCACTACGTCGGCGTGC
CCGCCGTTTTCATTTTTCCCTCCCCCCTCCTCCCCGAACCTCCTCCCTCC
TTCTTCCTCCCTCCCCCTCCTCCCTCCTTCTTCCTCCCTCCCCCTCCTCC
CTCCTTCTTCCTCCCTTCCCCTCCTCCCTCCTTCCCCGCGTCTCCTACCC
TCTTCCTTCGTCCGCAAGCATCGCCCTCTTTCTTCCCCTCCCCTCCCGCC
CTTCTCCTCCTCTCGTTCCCTCCCTTCCTCCCATCCCTCCCTCTTTCCCT
CCCTCCCTCTCTCCCTCCCTACCCTTCCTCCCTCTCTCCCTCCCTACCCT
CCCTCCCTCCTCCTCTCCCTCCTCCCAGGCCTTCTGA
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Coding sequence (CDS) from alignment at KK037262.1:49954..50640-

>rna10102 ID=rna10102|Name=rna10102|organism=Nannochloropsis gaditana|type=CDS|length=480bp|location=Sequence derived from alignment at KK037262.1:49954..50640- (Nannochloropsis gaditana)
ATGGGGCGTGAACGCGACCTCCTTCCCTCCCTCCCTCCCGCCTTCTCCCT
CCTCCTCCTCCTTGCCCTCCTACCATCCGCCCACCTTTTCGTTTTGCCTT
CGGCATCAGGTGCGTGTGCTGGTGGCGCACTACGTCGGCGTGCCCGCCGT
TTTCATTTTTCCCTCCCCCCTCCTCCCCGAACCTCCTCCCTCCTTCTTCC
TCCCTCCCCCTCCTCCCTCCTTCTTCCTCCCTCCCCCTCCTCCCTCCTTC
TTCCTCCCTTCCCCTCCTCCCTCCTTCCCCGCGTCTCCTACCCTCTTCCT
TCGTCCGCAAGCATCGCCCTCTTTCTTCCCCTCCCCTCCCGCCCTTCTCC
TCCTCTCGTTCCCTCCCTTCCTCCCATCCCTCCCTCTTTCCCTCCCTCCC
TCTCTCCCTCCCTACCCTTCCTCCCTCTCTCCCTCCCTACCCTCCCTCCC
TCCTCCTCTCCCTCCTCCCAGGCCTTCTGA
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Synonyms
Publications