EWM20602.1, cds10071 (CDS) Nannochloropsis gaditana

Overview
NameEWM20602.1
Unique Namecds10071
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:49954..50433 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20602.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101288g1.7671.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:49954..50433 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20602.1 vs. NCBI_GenBank
Match: gi|585100354|gb|EWM20602.1| (hypothetical protein Naga_101288g1 [Nannochloropsis gaditana])

HSP 1 Score: 257.299 bits (656), Expect = 1.013e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MGRERDLLPSLPPAFSLLLLLALLPSAHLFVLPSASGACAGGALRRRARRFHFSLPPPPRTSSLLLPPSPSSLLLPPSPSSLLLPPFPSSLLPRVSYPLPSSASIALFLPLPSRPSPPLVPSLPPIPPSFPPSLSPSLPFLPLSLPTLPPSSSPSSQAF 159
            MGRERDLLPSLPPAFSLLLLLALLPSAHLFVLPSASGACAGGALRRRARRFHFSLPPPPRTSSLLLPPSPSSLLLPPSPSSLLLPPFPSSLLPRVSYPLPSSASIALFLPLPSRPSPPLVPSLPPIPPSFPPSLSPSLPFLPLSLPTLPPSSSPSSQAF
Sbjct:    1 MGRERDLLPSLPPAFSLLLLLALLPSAHLFVLPSASGACAGGALRRRARRFHFSLPPPPRTSSLLLPPSPSSLLLPPSPSSLLLPPFPSSLLPRVSYPLPSSASIALFLPLPSRPSPPLVPSLPPIPPSFPPSLSPSLPFLPLSLPTLPPSSSPSSQAF 159
The following BLAST results are available for this feature:
BLAST of EWM20602.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100354|gb|EWM20602.1|1.013e-85100.00hypothetical protein Naga_101288g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10102rna10102Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications