rna10099, rna10099 (mRNA) Nannochloropsis gaditana

Overview
Namerna10099
Unique Namerna10099
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length716
Alignment locationKK037262.1:43066..44181 -

Link to JBrowse

Properties
Property NameValue
Productcamp-dependent protein kinase
Orig transcript idgnl|cribi|Naga_100950g3.3814.mrna
Orig protein idgnl|cribi|Naga_100950g3.3814
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:43066..44181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100950g3gene9802Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10099rna10099-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20605.1cds10068Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10099 ID=rna10099|Name=rna10099|organism=Nannochloropsis gaditana|type=mRNA|length=716bp
AAATGCTTGCTCTATCATGCTACCCAAAAACTAAAAAATCGATCGTGAAG
GTATTACATTGGTGGATTACTTGAAATATTTATGCCTCCTGTTTATAATA
ATGACGTTTCTTGTAGATCCTACCAGATTTTTGCGCCATGGTAATTCCAG
TCATGCATCGGAACGTCCAAACATGGGACGTTTCCTACATCGCTTTTCCC
CACCGGATCGAACCAATTGTAAAGAGAGGGAAATCATCCAGGCTGTATAT
CTTGGACAAAAATTGGGAAAACTCCATCGAGAAGACTTGTGTATTCGGAA
TCTGCGCGCCCGCAGCCAGATAGTATCCCGACGGCTCGATCGTGCACAGC
ACGCCCGTAGTGCTTTTGACGTCGTATCACAGCCACGAAACGCTGCCATT
GGTCAATCGAAAAAGTGGCATCCGAACACATGGTATAGGTTGATGAACAT
AATGAAACATGTGATGGACGTTGTGTCGATTCCACTACTACTATTATCGA
TTGATTTTTTGAAAAAAAGTGCCTTCCTGTACGCTAACACTAAGGGCCAT
TAGTCTGGTACGTAGACAAGGCGCAGGTTTACATCGAAGAGGAAGCATCC
AAAGCCACTATAATTGCTTAATTACCAAAATAAAACATTCCATTACACGT
TTCCCCAAAAATTCTTACTATCAGTTTCTGAAAGGAATGACAGCGCAATC
GAACGTTTTCCCGGGG
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protein sequence of rna10099

>rna10099-protein ID=rna10099-protein|Name=rna10099|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
PPAHPPSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDA
LFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDY
WQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDC
RSFLSGLLTPIPKVRLGARLGTVEGKSHRWLRKEEWGGGGREGGKEVVSP
LYPVVQAWLSRVGGREDEVQKEVDEAWERVMGREGGEGEALKRCWL
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mRNA from alignment at KK037262.1:43066..44181-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10099 ID=rna10099|Name=rna10099|organism=Nannochloropsis gaditana|type=mRNA|length=1116bp|location=Sequence derived from alignment at KK037262.1:43066..44181- (Nannochloropsis gaditana)
CCCCCCGCCCATCCGCCCTCCCTTCCCCCCGCTCTCCCACCCTCCGGCGT
CCGGGAAGCTTCCTTAAGGTACGTGGCCTGGTCGTGTCTGACCCTGCTGG
GGCAGCTGCACGAATCTCAGATTCTTTTTCGGGGATTCCACCCGGACGCG
CTCTTCCTTGATGCGCTGGGAAGACTTAAGGTGACGGACCTCCGGCACGC
CAAGGTCGGCCTGGAGAAGGTGAGGAAGGGCGGTAGGGAGGGAGGGAGGG
AGGGGTGCACCTCTTTCCGTGGCTCGAATCTCATTCTCTCGTGCCCGCCC
TCCCCCCCGCCCTCCCCCCCAGTCCTACACCCTCTGCGGTCCCCCTGGCT
ACTGGGCGCCGGAGATGTTAACGGGCGACGGTTACGTCCAAGGGGTGGAC
TATTGGCAGTTGGGAGTCCTACTGTTTGAATTGCTAACGGGCGAGGAGCC
GTTACGGGGCCCAACGGTCGCGGCGGTGAAGGAGGCGATCGCCGATTATG
AAAACGCGGCCACGCTGGGGTGGCCGGGGGAGGCGGTTTGTTCGTTGGAC
TGTCGGAGTTTTCTCTCGGGGTTATTGACGCCCATCCCCAAAGTCCGACT
CGGGGCCCGCTTGGGCACCGTGGAGGGAAAGTCGCACCGGTGGTTGCGGA
AAGAGGAATGGGGAGGAGGTGGGAGGGAGGGTGGGAAGGAGGTGGTGTCA
CCCTTGTACCCCGTGGTGCAAGCCTGGTTGTCTCGCGTCGGGGGAAGGGA
GGACGAGGTACAGAAAGAGGTGGACGAGGCGTGGGAGAGGGTGATGGGGA
GGGAGGGGGGCGAGGGGGAGGCGCTCAAGCGGTGTTGGTTGTAAGCTCGG
GGAGGTAGGGAAGGAGGGAATCAGGTGCCGGGGGAGGGGGAGGGGGAGGG
AGGGGTGTGGTGGTGGCGGTCACGGGACTGATGGGATGGGAAGGAGGGGG
AGGGGGAGGGAGGAGGTGCGCTTTCTTTAAGAGATGACGCGACAGAAATG
GAAGGCGTTTAAAGCTTTGAAGTCTTGATACATTGTGACGGAAGTGCTGG
AATGAAAAGCAAGTTGGGTTAAGAAACGAAAGCCACAAGCAAGCTGTGGG
ACTCCGGCCCGTGTCG
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Coding sequence (CDS) from alignment at KK037262.1:43066..44181-

>rna10099 ID=rna10099|Name=rna10099|organism=Nannochloropsis gaditana|type=CDS|length=1482bp|location=Sequence derived from alignment at KK037262.1:43066..44181- (Nannochloropsis gaditana)
TCCTACACCCTCTGCGGTCCCCCTGGCTACTGGGCGCCGGAGATGTTAAC
GGGCGACGGTTACGTCCAAGGGGTGGACTATTGGCAGTTGGGAGTCCTAC
TGTTTGAATTGCTAACGGGCGAGGAGCCGTTACGGGGCCCAACGGTCGCG
GCGGTGAAGGAGGCGATCGCCGATTATGAAAACGCGGCCACGCTGGGGTG
GCCGGGGGAGGCGGTTTGTTCGTTGGACTGTCGGAGTTTTCTCTCGGGGT
TATTGACGCCCATCCCCAAAGTCCGACTCGGGGCCCGCTTGGGCACCGTG
GAGGGAAAGTCGCACCGGTGGTTGCGGAAAGAGGAATGGGGAGGAGGTGG
GAGGGAGGGTGGGAAGGAGGTGGTGTCACCCTTGTACCCCGTGGTGCAAG
CCTGGTTGTCTCGCGTCGGGGGAAGGGAGGACGAGGTACAGAAAGAGGTG
GACGAGGCGTGGGAGAGGGTGATGGGGAGGGAGGGGGGCGAGGGGGAGGC
GCTCAAGCGGTGTTGGTTGTAACCCCCCGCCCATCCGCCCTCCCTTCCCC
CCGCTCTCCCACCCTCCGGCGTCCGGGAAGCTTCCTTAAGGTACGTGGCC
TGGTCGTGTCTGACCCTGCTGGGGCAGCTGCACGAATCTCAGATTCTTTT
TCGGGGATTCCACCCGGACGCGCTCTTCCTTGATGCGCTGGGAAGACTTA
AGGTGACGGACCTCCGGCACGCCAAGGTCGGCCTGGAGAAGTCCTACACC
CTCTGCGGTCCCCCTGGCTACTGGGCGCCGGAGATGTTAACGGGCGACGG
TTACGTCCAAGGGGTGGACTATTGGCAGTTGGGAGTCCTACTGTTTGAAT
TGCTAACGGGCGAGGAGCCGTTACGGGGCCCAACGGTCGCGGCGGTGAAG
GAGGCGATCGCCGATTATGAAAACGCGGCCACGCTGGGGTGGCCGGGGGA
GGCGGTTTGTTCGTTGGACTGTCGGAGTTTTCTCTCGGGGTTATTGACGC
CCATCCCCAAAGTCCGACTCGGGGCCCGCTTGGGCACCGTGGAGGGAAAG
TCGCACCGGTGGTTGCGGAAAGAGGAATGGGGAGGAGGTGGGAGGGAGGG
TGGGAAGGAGGTGGTGTCACCCTTGTACCCCGTGGTGCAAGCCTGGTTGT
CTCGCGTCGGGGGAAGGGAGGACGAGGTACAGAAAGAGGTGGACGAGGCG
TGGGAGAGGGTGATGGGGAGGGAGGGGGGCGAGGGGGAGGCGCTCAAGCG
GTGTTGGTTGTAACCCCCCGCCCATCCGCCCTCCCTTCCCCCCGCTCTCC
CACCCTCCGGCGTCCGGGAAGCTTCCTTAAGGTACGTGGCCTGGTCGTGT
CTGACCCTGCTGGGGCAGCTGCACGAATCTCAGATTCTTTTTCGGGGATT
CCACCCGGACGCGCTCTTCCTTGATGCGCTGGGAAGACTTAAGGTGACGG
ACCTCCGGCACGCCAAGGTCGGCCTGGAGAAG
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Synonyms
Publications