EWM20605.1, cds10068 (CDS) Nannochloropsis gaditana

Overview
NameEWM20605.1
Unique Namecds10068
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:43963..44181 -
Alignment locationKK037262.1:43338..43859 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20605.1
Productcamp-dependent protein kinase
Partialtrue
Orig transcript idgnl|cribi|Naga_100950g3.3814.mrna
GbkeyCDS
End range.
End range44181
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:43963..44181 -
KK037262.1supercontigKK037262.1:43338..43859 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|585100362|gb|EWM20605.1| (camp-dependent protein kinase, partial [Nannochloropsis gaditana])

HSP 1 Score: 489.574 bits (1259), Expect = 8.871e-175
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 
Query:    1 PPAHPPSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEGKSHRWLRKEEWGGGGREGGKEVVSPLYPVVQAWLSRVGGREDEVQKEVDEAWERVMGREGGEGEALKRCWL 246
            PPAHPPSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEGKSHRWLRKEEWGGGGREGGKEVVSPLYPVVQAWLSRVGGREDEVQKEVDEAWERVMGREGGEGEALKRCWL
Sbjct:    1 PPAHPPSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEGKSHRWLRKEEWGGGGREGGKEVVSPLYPVVQAWLSRVGGREDEVQKEVDEAWERVMGREGGEGEALKRCWL 246
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|301103620|ref|XP_002900896.1| (cAMP-dependent protein kinase catalytic subunit, putative [Phytophthora infestans T30-4] >gi|262101651|gb|EEY59703.1| cAMP-dependent protein kinase catalytic subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 114.775 bits (286), Expect = 2.079e-25
Identity = 69/190 (36.32%), Postives = 94/190 (49.47%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAA--------VKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  LP         R+ A   L  L  LHE  I++R   P+ L +D +G LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G T           VKE + D+ ++           S  CR  LS LL   P  RLG   G     ++H W  K +W
Sbjct:  557 PSSPGRLP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDPVGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMIVGHSPFAGSTQVGQMQICRNIVKEKV-DFPSSV----------SSSCRDILSKLLERDPTKRLGMTHGGARAIRTHAWFAKVDW 730
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|570317004|gb|ETO64952.1| (AGC/PKA protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 111.694 bits (278), Expect = 2.448e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  529 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 702
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|568038809|gb|ETM36325.1| (AGC/PKA protein kinase [Phytophthora parasitica])

HSP 1 Score: 111.694 bits (278), Expect = 2.480e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  557 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 730
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|675174455|ref|XP_008896112.1| (AGC/PKA protein kinase [Phytophthora parasitica INRA-310] >gi|568008904|gb|ETL83118.1| AGC/PKA protein kinase [Phytophthora parasitica] >gi|568103780|gb|ETN18437.1| AGC/PKA protein kinase [Phytophthora parasitica INRA-310] >gi|570971042|gb|ETP34161.1| AGC/PKA protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 111.694 bits (278), Expect = 2.480e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  557 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 730
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|567979411|gb|ETL29890.1| (AGC/PKA protein kinase [Phytophthora parasitica])

HSP 1 Score: 111.309 bits (277), Expect = 3.032e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  557 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDRLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 730
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|566013347|gb|ETI36258.1| (AGC/PKA protein kinase [Phytophthora parasitica P1569] >gi|567950742|gb|ETK76450.1| AGC/PKA protein kinase [Phytophthora parasitica] >gi|570940795|gb|ETP06052.1| AGC/PKA protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 111.309 bits (277), Expect = 3.032e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  557 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDLKPENLLIDRLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 730
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|970659620|gb|KUF97244.1| (hypothetical protein AM588_10011330 [Phytophthora nicotianae])

HSP 1 Score: 110.923 bits (276), Expect = 3.314e-24
Identity = 69/200 (34.50%), Postives = 97/200 (48.50%), Query Frame = 0 
Query:    5 PPSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEWGGGGREGGKEVVSPLYP 203
             PS P  +P    R     + A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W    +   K+V +P  P
Sbjct:  467 TPSSPGRIPNDHAR-----FYASHVLMALEYLHERCIVYRDLKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDWDAMLQ---KKVNAPYKP 655
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|954188236|gb|KRX01061.1| (Protein kinase-like domain [Pseudocohnilembus persalinus])

HSP 1 Score: 106.686 bits (265), Expect = 3.950e-24
Identity = 65/201 (32.34%), Postives = 98/201 (48.76%), Query Frame = 0 
Query:   19 EASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLE---KSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLD----------CRSFLSGLLTPIPKVRLGARLGTVEGKSHRWLRKEEWGGGGREGGKEVVSPLYPVVQ 206
            E + RY A   +  L  LHE  I++R   P+ + LD  G +K+ D   +K G++    + ++CG P Y APE+LT  GY + VDYW LG +++E+LTG  P   P     K+    Y+           + + D          C +FL GLL   P  RLGA+ G  E K+H W  + +W        K+  +P  PV++
Sbjct:   21 ENTTRYYAAQIILALEALHEQDIIYRDLKPENVLLDDKGYIKLADFGMSKKGVKGKNDAKSVCGTPEYLAPEILTKQGYGKAVDYWALGSIIYEMLTGFPPFYIPQDQQNKQ----YDEGQARNDLFMRILNEDLRYPPHLTKLCINFLQGLLQKDPNKRLGAKNGIQEIKNHPWFNQLDW---NILINKQYQAPYKPVIK 214
[Close]
BLAST of EWM20605.1 vs. NCBI_GenBank
Match: gi|970624102|gb|KUF72059.1| (cGMP-dependent protein kinase 1 [Phytophthora nicotianae])

HSP 1 Score: 110.538 bits (275), Expect = 4.700e-24
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0 
Query:    6 PSLPPALPPSGVREASLRYVAWSCLTLLGQLHESQILFRGFHPDALFLDALGRLKVTDLRHAKVGLEKSYTLCGPPGYWAPEMLTGDGYVQGVDYWQLGVLLFELLTGEEPLRGPTVAAVKEAIADYENAATLGWPGEAVCSLDCRSFLSGLLTPIPKVRLGARLGTVEG-KSHRWLRKEEW 186
            PS P  +P         R+ A   L  L  LHE  I++R   P+ L +D LG LKV D   AKV  +++YTLCG   Y APE++ G G+ +GVDYW LG+L++E++ G  P  G +     + +    N         +  S  CR  +S LL   P  RLG   G     +SH W  K +W
Sbjct:  532 PSSPGRIP-----NDHARFYASHVLMALEYLHERCIVYRDXKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQV---DQMQICRNIVKEKVEFPSYVSSSCRDIISKLLERDPTKRLGMTHGGARAIRSHAWFAKLDW 705
The following BLAST results are available for this feature:
BLAST of EWM20605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100362|gb|EWM20605.1|8.871e-175100.00camp-dependent protein kinase, partial [Nannochlor... [more]
gi|301103620|ref|XP_002900896.1|2.079e-2536.32cAMP-dependent protein kinase catalytic subunit, p... [more]
gi|570317004|gb|ETO64952.1|2.448e-2435.71AGC/PKA protein kinase [Phytophthora parasitica P1... [more]
gi|568038809|gb|ETM36325.1|2.480e-2435.71AGC/PKA protein kinase [Phytophthora parasitica][more]
gi|675174455|ref|XP_008896112.1|2.480e-2435.71AGC/PKA protein kinase [Phytophthora parasitica IN... [more]
gi|567979411|gb|ETL29890.1|3.032e-2435.71AGC/PKA protein kinase [Phytophthora parasitica][more]
gi|566013347|gb|ETI36258.1|3.032e-2435.71AGC/PKA protein kinase [Phytophthora parasitica P1... [more]
gi|970659620|gb|KUF97244.1|3.314e-2434.50hypothetical protein AM588_10011330 [Phytophthora ... [more]
gi|954188236|gb|KRX01061.1|3.950e-2432.34Protein kinase-like domain [Pseudocohnilembus pers... [more]
gi|970624102|gb|KUF72059.1|4.700e-2435.71cGMP-dependent protein kinase 1 [Phytophthora nico... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10099rna10099Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications