rna10096, rna10096 (mRNA) Nannochloropsis gaditana

Overview
Namerna10096
Unique Namerna10096
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length424
Alignment locationKK037262.1:38956..39759 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101410g1.4586.mrna
Orig protein idgnl|cribi|Naga_101410g1.4586
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:38956..39759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101410g1gene9799Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20608.1cds10065Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10096rna10096-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10096 ID=rna10096|Name=rna10096|organism=Nannochloropsis gaditana|type=mRNA|length=424bp
CCTACCTCGCTGGACGTGCACCTCGTTTTCTTTCCTTTAATATTTCATGC
CCCCGCCCCCTGCCCGCCTTGGCGCCCCCTGTCCCCTGCCGGCTTTTTCC
GGTCTTCGAGGCATTTTCTCGGACATTGTTGGTCTCGCACGGTCGGGTCG
TGCTTGTGCCCGGCCGGGGGGTTCAGCCTGGAGGAGGAGGGTAGCCCGTG
TAAGCATGGGAGGGAGCGGGAAGTTCCTTTGGTCCGAAGAAAGACAGGCG
AAAAGACGGAGAATAAAAAACACAAAGATATGGAGATTCTATTGATCACA
GGCAATGATTGAAATCTTTGAATTCCTTTGTATTTTCATCGGCTTTCGAA
GTAACTCTCACGCGGGGGAGGGCCCAAGGCACCTCCTCCCACAAATATCA
ATCGGGAGCACAGCGGTAAACATC
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protein sequence of rna10096

>rna10096-protein ID=rna10096-protein|Name=rna10096|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp
GQEMESGFVGQESAGMHPCESLFPNAVVGLLFRITRFFESFTRYPLSLIC
MYIFSSPCDCASSPFFPCFFCPCQRIKRREGREGGRKGGRKGLVRCWNTM
RSSRICRGFSVPRQPRKRHLPPLGREGGREGGRNREGRGGGEAGD
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mRNA from alignment at KK037262.1:38956..39759-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10096 ID=rna10096|Name=rna10096|organism=Nannochloropsis gaditana|type=mRNA|length=804bp|location=Sequence derived from alignment at KK037262.1:38956..39759- (Nannochloropsis gaditana)
AGGCCAAGAGATGGAGTCGGGCTTTGTTGGCCAGGAAAGTGCCGGAATGC
ACCCTTGTGAATCTTTATTTCCAAATGCAGTTGTCGGCCTCCTTTTCAGA
ATAACTCGATTTTTTGAGTCATTCACACGATATCCTTTATCTTTGATATG
CATGTATATATTCTCTTCCCCTTGTGATTGTGCGTCCTCCCCCTTCTTCC
CATGTTTCTTTTGCCCCTGCCAGCGCATCAAGAGGAGGGAGGGGAGGGAG
GGGGGAAGGAAGGGGGGGAGGAAGGGCCTCGTAAGATGCTGGAATACGAT
GAGAAGCTCAAGGATCTGCCGCGGGTTTTCCGTTCCACGTCAGCCGCGAA
AAAGGCACCTGCCCCCTCTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
AATAGAGAGGGGAGGGGGGGAGGGGAGGCCGGGGATTGAGGAGGGAAAGG
GAAATGGTTTTTTGATGAGTGTGGATGGAGCGAGGGCTTTTGGGGTGTGG
AGAGGGAAAACATTGACTGCTCCTTGCGCATTCGAAATCCATATTCATAC
TTGTTATCGATTTAATTTCAAAAAGGGGGAAAAGATGGTTTGTGCATATG
AGTAGCCCTTCTCGATGACAAGACAGAGAAGAGTCCTGATGTGGAATCGG
ATCAAGACGACATGCGTCCTGAGCTGGAACAGCTTGGACGACGCTGGTAG
GGAAATAACGTTATTTTAAGAGAGGCACTGAGTGAAAGAATGTGGGCTCC
CCTTGCCCCCCCCCTTGGCTTCTAACCTGTTGTGTCGTCTGTCATTTGTT
TTCC
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Coding sequence (CDS) from alignment at KK037262.1:38956..39759-

>rna10096 ID=rna10096|Name=rna10096|organism=Nannochloropsis gaditana|type=CDS|length=438bp|location=Sequence derived from alignment at KK037262.1:38956..39759- (Nannochloropsis gaditana)
GGCCAAGAGATGGAGTCGGGCTTTGTTGGCCAGGAAAGTGCCGGAATGCA
CCCTTGTGAATCTTTATTTCCAAATGCAGTTGTCGGCCTCCTTTTCAGAA
TAACTCGATTTTTTGAGTCATTCACACGATATCCTTTATCTTTGATATGC
ATGTATATATTCTCTTCCCCTTGTGATTGTGCGTCCTCCCCCTTCTTCCC
ATGTTTCTTTTGCCCCTGCCAGCGCATCAAGAGGAGGGAGGGGAGGGAGG
GGGGAAGGAAGGGGGGGAGGAAGGGCCTCGTAAGATGCTGGAATACGATG
AGAAGCTCAAGGATCTGCCGCGGGTTTTCCGTTCCACGTCAGCCGCGAAA
AAGGCACCTGCCCCCTCTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGA
ATAGAGAGGGGAGGGGGGGAGGGGAGGCCGGGGATTGA
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Synonyms
Publications