EWM20608.1, cds10065 (CDS) Nannochloropsis gaditana

Overview
NameEWM20608.1
Unique Namecds10065
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:39321..39758 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20608.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101410g1.4586.mrna
GbkeyCDS
End range.
End range39758
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:39321..39758 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20608.1 vs. NCBI_GenBank
Match: gi|585100366|gb|EWM20608.1| (hypothetical protein Naga_101410g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 287.73 bits (735), Expect = 3.077e-98
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 GQEMESGFVGQESAGMHPCESLFPNAVVGLLFRITRFFESFTRYPLSLICMYIFSSPCDCASSPFFPCFFCPCQRIKRREGREGGRKGGRKGLVRCWNTMRSSRICRGFSVPRQPRKRHLPPLGREGGREGGRNREGRGGGEAGD 145
            GQEMESGFVGQESAGMHPCESLFPNAVVGLLFRITRFFESFTRYPLSLICMYIFSSPCDCASSPFFPCFFCPCQRIKRREGREGGRKGGRKGLVRCWNTMRSSRICRGFSVPRQPRKRHLPPLGREGGREGGRNREGRGGGEAGD
Sbjct:    1 GQEMESGFVGQESAGMHPCESLFPNAVVGLLFRITRFFESFTRYPLSLICMYIFSSPCDCASSPFFPCFFCPCQRIKRREGREGGRKGGRKGLVRCWNTMRSSRICRGFSVPRQPRKRHLPPLGREGGREGGRNREGRGGGEAGD 145
The following BLAST results are available for this feature:
BLAST of EWM20608.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100366|gb|EWM20608.1|3.077e-98100.00hypothetical protein Naga_101410g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10096rna10096Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications