rna10093, rna10093 (mRNA) Nannochloropsis gaditana

Overview
Namerna10093
Unique Namerna10093
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1200
Alignment locationKK037262.1:30376..31007 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101429g1.10414.mrna
Orig protein idgnl|cribi|Naga_101429g1.10414
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:30376..31007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101429g1gene9795Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20612.1cds10062Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10093rna10093-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10093 ID=rna10093|Name=rna10093|organism=Nannochloropsis gaditana|type=mRNA|length=1200bp
CTACGTAGGTATATACATGTATAAATCGACAATGACACACGGTTGACGGT
CCTTTCGGCCGCAACTGCCGTTTACTCACCGTCCTTTTCGTCTTTTTTCC
CCTCCTTCTAGGGCGCGAGCATGACCCCATCAGACGTCAAGCAACAAGTT
CAGTGTTTGCTTCGCACTGCGCTTCACACAACGGAAGAAAGCGTTTCGGA
CGAAGGTCCTTCCTTCATGGTCCTGGGAGAGCATTCCTCGACGCCGGCTG
CGATGCATGTCTCACGTCCTGGGGAGAATAGGGAGGGCCCAGAGGCATCA
AGTGTTAGGGCTCCACTTGCTTTTCTGCATGCACTACGCCTGGAAATTCA
ACGCATCGAAGCGCACGTCCGGCGTCAAATCCTGGCAAGGAACAGCCAGA
AGGCGCCAAGAGAGGCCTCTCCCGTTTCCGGCGTTCCACGCACGTCGGGC
TCGGCCCAAGCGGGGAATGACGTCCGGTGGGATTTATTCGCTCGTCCGAC
GCAACCTTTGAAAGTACCTTCCCAAGGCGAAGAAAGCCATACACTCCTCC
TCCTCAACACCCTTCAACAGAGCCTAGAGCCCTTCCACACCGCCCTCCGC
CGGGCTCTCCAACGGCTTTATGCCTCCCACTCCCGCTTACTCGACGCGTT
GAAGCTCAGCCAGGCGCAGCGCCGGGCGATGGCGGCGGCCGAGAGACATT
CGGTGCCGCTTCTAGAAGCCTTGCGAGTGAGTCATCGGCTTCGAAGCACG
ACGGCGGCCCCGCGGGGATGGAGCGAGGGAGTGTCTTTGCCCTACCTCCC
TCCCTCTCCGTACATGCCCGGGAACGAATGTCTGACGGCGTCTTTGTTAA
GGAGAGTGCAACTGCCTCGGAAACGGGGAGGGAGGGAGGTGGCCGAGGAG
GAGGAGGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAAGCAGGCGAAGAT
GAAGAGGGAGGAGGTACATGAGGGAGGAGGAGGGGAAGGAAGAGGGGGAG
GAGGAGGAGGAGGGGGAGGGAAAGGAGAAGGAGGAGGAGGAGAAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AAGAGGAAGAGCAGCGCCGGCGCAACCCAAAAAGCAGACGTTCATGGATG
ATGATGATGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATTAG
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protein sequence of rna10093

>rna10093-protein ID=rna10093-protein|Name=rna10093|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
PPSSSSHLSASTPAATQRKREKTARARTSLPPSHLLLLLLLPSSSSSSSS
QPATRRLNGERPSPSTEEEGREGGREGGREGVIEEDPVRRSASYMGGTGR
EEGGKEEAKELRPNWFEGGDKGGREGGREGRREDELYADVSAVLHFIEGS
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mRNA from alignment at KK037262.1:30376..31007-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10093 ID=rna10093|Name=rna10093|organism=Nannochloropsis gaditana|type=mRNA|length=632bp|location=Sequence derived from alignment at KK037262.1:30376..31007- (Nannochloropsis gaditana)
TCCTCCTTCTTCCTCCTCACATCTCAGCGCCTCGACGCCTGCAGCAACTC
AAAGAAAGCGAGAAAAAACCGCCCGAGCCCGTACCTCCCTCCCTCCCTCC
CACCTCCTCCTCCTCCTCCTCCTCCCCTCCTCCTCCTCCTCCTCTTCCTC
GCAGCCCGCGACGAGACGATTGAACGGCGAACGTCCTTCTCCCTCCACGG
AAGAGGAAGGGAGGGAGGGCGGGAGGGAGGGCGGAAGGGAGGGAGTGATA
GAGGAAGACCCTGTGAGGCGGAGTGCCAGTTACATGGGCGGGACAGGGAG
GGAAGAGGGAGGGAAGGAGGAAGCGAAGGAACTGCGCCCAAATTGGTTCG
AGGGGGGGGACAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGAG
GACGAGTTATACGCGGACGTGTCGGCGGTGTTACACTTCATTGAGGGGAG
CTAGTGGTTAGCATAAGGGAGGGAAGGGGGGAAGGAGGGAGGGAGGGAGG
GAGGGAGGCAGGCAGGGAGGGAGGGAGGGAGGGAAGGAGGCAGAGATCAA
TGAGTGTTGGTGAATGAGGCTCCGGCCGCCAAATGCGTCGTGAGCCAGAA
AAGGAAAAACATCCAAATGAAGCGATTAGTGA
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Coding sequence (CDS) from alignment at KK037262.1:30376..31007-

>rna10093 ID=rna10093|Name=rna10093|organism=Nannochloropsis gaditana|type=CDS|length=453bp|location=Sequence derived from alignment at KK037262.1:30376..31007- (Nannochloropsis gaditana)
CCTCCTTCTTCCTCCTCACATCTCAGCGCCTCGACGCCTGCAGCAACTCA
AAGAAAGCGAGAAAAAACCGCCCGAGCCCGTACCTCCCTCCCTCCCTCCC
ACCTCCTCCTCCTCCTCCTCCTCCCCTCCTCCTCCTCCTCCTCTTCCTCG
CAGCCCGCGACGAGACGATTGAACGGCGAACGTCCTTCTCCCTCCACGGA
AGAGGAAGGGAGGGAGGGCGGGAGGGAGGGCGGAAGGGAGGGAGTGATAG
AGGAAGACCCTGTGAGGCGGAGTGCCAGTTACATGGGCGGGACAGGGAGG
GAAGAGGGAGGGAAGGAGGAAGCGAAGGAACTGCGCCCAAATTGGTTCGA
GGGGGGGGACAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGAGG
ACGAGTTATACGCGGACGTGTCGGCGGTGTTACACTTCATTGAGGGGAGC
TAG
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Synonyms
Publications