EWM20612.1, cds10062 (CDS) Nannochloropsis gaditana

Overview
NameEWM20612.1
Unique Namecds10062
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:30554..31006 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20612.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101429g1.10414.mrna
GbkeyCDS
End range.
End range31006
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:30554..31006 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM20612.1 vs. NCBI_GenBank
Match: gi|585100378|gb|EWM20612.1| (hypothetical protein Naga_101429g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 288.115 bits (736), Expect = 3.189e-98
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 PPSSSSHLSASTPAATQRKREKTARARTSLPPSHLLLLLLLPSSSSSSSSQPATRRLNGERPSPSTEEEGREGGREGGREGVIEEDPVRRSASYMGGTGREEGGKEEAKELRPNWFEGGDKGGREGGREGRREDELYADVSAVLHFIEGS 150
            PPSSSSHLSASTPAATQRKREKTARARTSLPPSHLLLLLLLPSSSSSSSSQPATRRLNGERPSPSTEEEGREGGREGGREGVIEEDPVRRSASYMGGTGREEGGKEEAKELRPNWFEGGDKGGREGGREGRREDELYADVSAVLHFIEGS
Sbjct:    1 PPSSSSHLSASTPAATQRKREKTARARTSLPPSHLLLLLLLPSSSSSSSSQPATRRLNGERPSPSTEEEGREGGREGGREGVIEEDPVRRSASYMGGTGREEGGKEEAKELRPNWFEGGDKGGREGGREGRREDELYADVSAVLHFIEGS 150          
The following BLAST results are available for this feature:
BLAST of EWM20612.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100378|gb|EWM20612.1|3.189e-98100.00hypothetical protein Naga_101429g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10093rna10093Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications