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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100112g10.5442.mrna |
| Orig protein id | gnl|cribi|Naga_100112g10.5442 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:950106..951491 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1009 ID=rna1009|Name=rna1009|organism=Nannochloropsis gaditana|type=mRNA|length=1602bp
CGATCCCGCTTTTGCCCCACAACAAGCCCACCTTCCCATCAATCTGCCAT
ACAGTAAAACAGACAATTTGGTTGCATACTTATTTGCTGGGTGGCAGATT
CACTCGTGAACTTGGCCTATCTATTTCCCCGCCAGCCATGCCCTCAGCGC
CCGGAGGTACGAGTCTTTCCCACCACAAGCACCGCAGGCCCGAGATACTC
TCACAGTCAATAAGAATTTCTGCCTTTCTCAAAACTCCCGCCCTTCTGCT
GCTGTTCATGCTGGTACCGCTGGCTGCACTTCCTCCAACCCCTGCTTTTG
TGCCCACACTGATCATGGAGTCTATTCAGCAGCGCCATAACCAGCAGCCA
GGAGAGCAGGCGCGTAAAGCGCCTTGCGACGTTATTACCAGTAATTCTCT
TTGCATTTTACATTCCATCAGCGGCACAAAGCAAACACGAGCGACAAGAG
AAAGCAGCCACCACGAAGATGCGCCAGGGTCAATCAGGCGCCTGACCTGG
GGGGCTCCCTCTATAACACATTCCCATCATGAGGCCTCTGAGGATGGATC
CGTTCCTTCCGCCTCCTTCATATCTACCTCCTCCCGGGTCAATTCCCCTT
CTGCTGTCTCTGCGAGTACCACTACCGCAGACGTCATGTCCTTGGACAGC
ATTCGCAGCACCCTGATCCGGCAAGAGGACTCGATCATCTTCGCTTTGAT
CGAGCGCGCGCAATTCCGCCAAAATCAAGCAATTTATGCCAAAGGTATTT
TGCAACTCGATCCCTCCATTCCCGACTACCCCTTCCTCAAGACCCTCTCC
TTCCTCGAGTACCTGCTTTTGGAGACGGAGAAGCTCCACGGCAAGGTCCG
GCGATACACGAGTCCGGAGGAGCACGCCTTCTTCCCGGAGCATCTGCCCG
ACCCGATCCTGACGCCGCTCCAGTTCCCGGCCCTCCTCGCGCCCAACACG
GTGGATGTAAACGCACAGATTCTCCACCTTTACATCAACGAGGTGGTGCC
CGCCGTCTGCAAGGAGGGCGACGACGAGCAGCACGGTTCCTCCGTCCTCG
CCGACATCACCCTCCTTCAAGCCCTCTCTCGGCGCATCCATCTGGGCAAG
TTCGTGGCAGAGACCAAATTCCAGGAGGAAGAGGCTAAATACCGTGCCCT
GGTCGGCGCGGACGACGTGGACGGGGTCATGTCCCTCCTGACCAACTCGG
CCGTGGAGGCGCGCGTCCTTGCCCGGGCCAAACTCAAGGCGAGCACGTAC
GGGCAGGACATCATGGGGGAGACGGAGGCCTGCAAGGTGGAGCCGGACGT
GATCGCGGCCATCTACCGGGACGTGATCATCCCCCTGACCAAGGACGTGG
AGGTCCTCTACCTCTTCGAACGGGTCGGGAGGAAGCCGCCTGCGCCCTTG
CCGGGGCCCGCCTCGCATTACCGCCTGCGGGTGGGGGAGAAGGGGGGGGA
AAGGAGATAGACGCAGGGAAAAGAGGAGACACAGTGATACGGCGCGAGCC
TGAGTGGAGCGTCAAGGGGGCCACAGCCTAGTAATCAAAGTACATAGCAT
ACATCTATCCCCCTCGGCCTCCCCAGTCTCCCAACGAGAGGTTGGGAGGT
AT back to topprotein sequence of rna1009 >rna1009-protein ID=rna1009-protein|Name=rna1009|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MASCRRREAAESRKSTFMCDLGRPSFLVALYVTATLTLCCVHGFVLPMRP
SQGGDVRFQRPSWRQRDVSVLSTTQEPGSEAPGDSMPLGARPVAPNSAGG
KGFGPTSTPTRAKIGTVNKRLMNVIDAELDGVRDRQPEEATPLSEEDTDL
NGINPVQPLGAAMFAAFISFLFWRITFGLAGALNNVHLDTDFYPAQRVFG
IASTAFVGITALGAGVIGVTAIGLLGLAARVTFGVVSGELDMNKKKIAPP
ADSSPVPLDAQGLPKVTGAWYDVSPPAPAAEEPKD back to topmRNA from alignment at CM002456.1:950106..951491- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1009 ID=rna1009|Name=rna1009|organism=Nannochloropsis gaditana|type=mRNA|length=1386bp|location=Sequence derived from alignment at CM002456.1:950106..951491- (Nannochloropsis gaditana)
ACGTCCCCCTTTGAACTTCATGGCATGACCTTGCCGGTGCGGCACAGCAC
ATGTCCATACATTCACCACCGCATTTGATAACCACTTGCGAGTGTCGGAT
GCTACAAACAATTCTCACATGTCCTTTGAGGTCACCGCGGGCGGCTCTTG
CACGCGCACGTCTCGGGACGGGCTTGGACAACTCGGTTGGCCCCCGCACG
ACGGCCGAACTAACCCCTCACCAAACATCTTTCACTCCACAGTCCGAACC
CTGAAAACCACAGGGTCCCTGTCGGAGCGCTGTGGGTCGTTGTTATGGCA
TCTTGTCGGAGAAGGGAAGCGGCTGAATCCCGAAAGTCGACTTTCATGTG
TGACCTTGGTCGTCCGTCTTTTCTGGTGGCACTGTACGTGACCGCCACGT
TGACACTATGCTGTGTCCACGGATTCGTTTTGCCCATGCGGCCATCACAA
GGAGGAGACGTACGCTTTCAGCGGCCATCGTGGAGGCAGCGAGATGTGTC
TGTGCTGTCGACCACGCAGGAACCAGGGAGCGAGGCCCCGGGAGACTCCA
TGCCCTTGGGTGCCAGACCGGTTGCTCCAAACTCAGCGGGCGGGAAAGGA
TTCGGCCCGACATCTACACCTACCCGTGCCAAAATAGGCACTGTGAACAA
GCGGCTGATGAACGTGATCGATGCCGAGCTGGACGGCGTGAGGGACAGGC
AGCCGGAGGAGGCCACGCCCCTCTCCGAGGAGGATACTGACCTGAACGGC
ATCAACCCCGTCCAGCCCTTGGGGGCGGCCATGTTCGCCGCTTTCATTTC
TTTCTTATTCTGGCGCATAACCTTCGGTTTGGCAGGCGCACTGAACAACG
TGCATCTCGACACCGACTTCTACCCCGCCCAGCGAGTCTTCGGCATTGCC
TCGACCGCCTTCGTGGGCATCACGGCCCTGGGCGCTGGCGTCATCGGCGT
CACCGCCATCGGCCTGCTCGGACTCGCCGCACGTGTCACGTTTGGAGTGG
TGTCAGGGGAGCTCGACATGAACAAGAAGAAAATTGCTCCGCCGGCGGAT
TCGAGCCCCGTGCCCCTGGACGCGCAAGGCCTGCCGAAGGTGACGGGCGC
CTGGTACGACGTGTCGCCGCCAGCGCCCGCCGCGGAGGAGCCGAAAGATT
AAGCCGGCGGATGTGCGGAAGGTCTGGGCGGAGTGGGGTGAATGGTGTTT
GTGCAAAGGGAGAAGGGAAGAGGGAAGAGCACAGGGACGGTGCCTGGAGG
TGTACAGTTCTGGGGGGGGGGGGCTGGGCGCCTGTGTGGCTGAGCACTGG
CGCGTGCATCAACTCCGCTATTAAGTGAGAAGAGTCAAGAAAGAGCTGCC
AAAATGAAAGAAAAAGGGATTCGCAGAAATTATTCT back to topCoding sequence (CDS) from alignment at CM002456.1:950106..951491- >rna1009 ID=rna1009|Name=rna1009|organism=Nannochloropsis gaditana|type=CDS|length=858bp|location=Sequence derived from alignment at CM002456.1:950106..951491- (Nannochloropsis gaditana)
ATGGCATCTTGTCGGAGAAGGGAAGCGGCTGAATCCCGAAAGTCGACTTT
CATGTGTGACCTTGGTCGTCCGTCTTTTCTGGTGGCACTGTACGTGACCG
CCACGTTGACACTATGCTGTGTCCACGGATTCGTTTTGCCCATGCGGCCA
TCACAAGGAGGAGACGTACGCTTTCAGCGGCCATCGTGGAGGCAGCGAGA
TGTGTCTGTGCTGTCGACCACGCAGGAACCAGGGAGCGAGGCCCCGGGAG
ACTCCATGCCCTTGGGTGCCAGACCGGTTGCTCCAAACTCAGCGGGCGGG
AAAGGATTCGGCCCGACATCTACACCTACCCGTGCCAAAATAGGCACTGT
GAACAAGCGGCTGATGAACGTGATCGATGCCGAGCTGGACGGCGTGAGGG
ACAGGCAGCCGGAGGAGGCCACGCCCCTCTCCGAGGAGGATACTGACCTG
AACGGCATCAACCCCGTCCAGCCCTTGGGGGCGGCCATGTTCGCCGCTTT
CATTTCTTTCTTATTCTGGCGCATAACCTTCGGTTTGGCAGGCGCACTGA
ACAACGTGCATCTCGACACCGACTTCTACCCCGCCCAGCGAGTCTTCGGC
ATTGCCTCGACCGCCTTCGTGGGCATCACGGCCCTGGGCGCTGGCGTCAT
CGGCGTCACCGCCATCGGCCTGCTCGGACTCGCCGCACGTGTCACGTTTG
GAGTGGTGTCAGGGGAGCTCGACATGAACAAGAAGAAAATTGCTCCGCCG
GCGGATTCGAGCCCCGTGCCCCTGGACGCGCAAGGCCTGCCGAAGGTGAC
GGGCGCCTGGTACGACGTGTCGCCGCCAGCGCCCGCCGCGGAGGAGCCGA
AAGATTAA back to top
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