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Properties
| Property Name | Value |
|---|
| Product | proteasome subunit alpha type 3 |
| Orig transcript id | gnl|cribi|Naga_100873g2.2863.mrna |
| Orig protein id | gnl|cribi|Naga_100873g2.2863 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037261.1 | supercontig | KK037261.1:72693..74921 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10073 ID=rna10073|Name=rna10073|organism=Nannochloropsis gaditana|type=mRNA|length=730bp
GGAGAATAATAGTTTAAGACGCACCCTCTCCCTGCATCCGGTGAGCCAGG
TGCCTACACGGATCGCGAGACCTACTTTTGGGAACGATGGCAGCCCAGGC
CCGAGAGCTATTGAGGCTATTACGTTTGCCTTCCAATCGCAGTTGTGCCG
ACTGCGACGCCCCTCTCAACGACAGCACCAACGTTTGGGCTAGCATAACC
CACGGCGTGTTCGTTTGTGTGACATGTGTCTCTGTCCATCGGAGGGTGGG
CACTCATATCTCCCGCGTACGCTCGGTGAACCTGGATGTGTGGACCGAGG
AGGAGACTGCCTGTATGCGAGAGCTCTCGGGGAATGGGGGCAATGTCTAC
GTCAACTCCATCTACGAGCGCTACCTCCCCCGGGGCTGTGTCAAACCTTC
CCCCGACGCCGCCTTCGAGGAGCGGGAGATGTGGATACGTGCCAAATACG
AGCACAAGGTGCGTCTTCTGCCTTTCCACCATTTTTTTCCTCCCTCCTGC
GTCCCCATCGTCGCCTTTTACCCTCGCAGCTCCATCGCAGCCTGTCCTTC
CTCCCTTCCTGCCCCGTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCTGT
GCTTCATCCCCGAAACCTCTTCGTCATCCCCATCCGACGCTCACACCGAC
AACGCTACCCTCCCTCCCTCCCTCCCTCTCCCCCTCCCTTCCTTCTCTGC
CTCCCCCTCCCATTCTCAGGCGTTTACCAT back to topprotein sequence of rna10073 >rna10073-protein ID=rna10073-protein|Name=rna10073|organism=Nannochloropsis gaditana|type=polypeptide|length=234bp
MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAV
ENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYK
DNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIEL
NVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILH
KLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV back to topmRNA from alignment at KK037261.1:72693..74921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10073 ID=rna10073|Name=rna10073|organism=Nannochloropsis gaditana|type=mRNA|length=2229bp|location=Sequence derived from alignment at KK037261.1:72693..74921- (Nannochloropsis gaditana)
TGAGCGGAGTGTCCGATCGTATCTCCCCCGGCATGAATCCCTTGACCAAG
ATTGTCCCCCGTTAGAGTCTATCTAGCGTGCCCGAGCATCATCGTCCCAT
TATCGTCTCATTTCCTGCCCCCCTTTTTTACTTCCCTCATTTTCTTGCCA
GGACCTTCCGTCCCTTCCCATCAGAATATGAGCTCTACGGGTGCTGGGTA
TGATGTGTCACCCACCACATTCTCGCCGGACGGACGACTTTTTCAAGTAG
AGTATGCTGGCAAGGCCGTGGAGAACAGGTAGGGGAAGTGATGGGCAGGA
AAACAAGGGGCGAGGCCGAGAATGCGCTTAGTCGGGAAGGACTTTTTTGA
ACAATTTCTTCTGTTTTGAATGTTCAAGAATAATAATAATGTGTGCTGCT
GCCATGCAGATTGTTCCTCGCTCATGCAAGACTCCATGCCCCTCCCCACG
TCCATCCTCCTTCCCTCTGTTACCCTTGCTCACGCAGCGGCACAGCCATT
GGCCTGAAGTGCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTTATGCT
CTCAAAGTTACTGGTGTCCAACTCGAACAGGCGGACATATAATGTGGGCT
CTCACATTTCCATCGCTGTAGCAGGTGTGGAGGGAGGATAGGAGGGAGAG
TAAAAGGAAGAAAAGCGACTCGCCGATTTCATAAGAGGAGGAACCAAAAG
GCTTCCATTCACCTTCCATGCCGTCCTTAACACTATCCTACAGGACTGGT
CTCGGACGGGCGGCAGGTAGTAAATCGAGCCCGGGAGGAAGCCGAGAACT
ACAAGGACAACTACGGAAGCGACATGCCCCCCACAAGTATGTCTTTGTAT
TCTTCCCTTGTCTACGTTCTGGCCTTATTAGGGTTACTATAATGGTGCAT
TTTCCTGTTTATTGGTGGCGGAATCAAGTGGACTAGCCCCCGGTCCCTCC
GCCCCTTCTACCTCTCAATCCTTTGCCTTGTCTCCCTCCTTTCTTTCCCT
TTCCCTCAGTCCTGGCCGATCGCCTCGCACAGTTTGTCCACTATTTTACC
CTCAACTACTCCTTGCGGCCCTTCGGCGCCTCCGTCCTCATTGCTGGCCA
CGACGCCTTCACCGACAGCATTGAGCTTAACGTGATCGAGCCCTCCGGAG
TCGCCTACGTAGGTCTTATGCTTTGTACCGGGAGGTTTCAAGGAGCCTCT
CTGGTTCATTCGATTATCTTCTAGCGCTTCTTTATTCATACCTCGTCCTT
TCCATTGCACTTTTCCTTCAGCTCGTAGCTATTTCGTTGCTTTCCCTTGC
CCTCTGTTGAATTCTCCATCCCTATTCCCCTTCCTGTCTTTTAATTCCCT
GTCGCGTAATTGCCTCTAATGGTTCACTGCACTGCTTATTAATACTGGCA
GGCATGTTTATGCCTCCACGAAGATGTAGCTTAGCAACTCCATTCTCCTT
TCTCTCCCCCCCACTCTCGTGTCCCTTCTGTCACCCCAGAAATTTTTTGG
CGCGGCGCTGGGAAAAGGCCGGCAAGGAGCGAAGACAGAGATCGAGAAGC
TGAAACTGACAGAAACCACCTGCGACGATGCGGTGAAGGAGATGGCTAAG
ATGTGAGCATGCGAGAAAGGGGGGAGGATAGGGAGAGAAGGTGCTAGTTC
CCGTGGGGTAAGGTGTGCGTTTCGCATGGTTTGGAAAGGGGAGACTTAAT
CTTTCTTGTGCACCCACCTTCATTCTCCAGCCTGCACAAGCTCCACGACG
AGAGCAAGGACAAGCCTTTCGAATTGGAGATGGCCTGGGTAACGGCAGCG
AACGGCTACAAGGCCCAGAGGGTGCCCCGGGACATAGTGTAAGTTACGGG
CGCCTTTTGTTCCCCCTTCTTTCCTCTGTTAGACAAATGGGTTTTTTGGT
GTATCAGTGTGGGTGCCTGTGAACGGTTTTACGGGTCAATTTAATGAAAA
AGTGCCAATGTTGAATGGCACGCGTCGGCTGTGCAGACTTTGGCTCATAC
ATCGCTTTCCTATCCCTCTTACGCAGCGCGGCGGCCGAAAAGTGGGCAAA
AGAAGCCATTGAGGCAGAGGATATGGATGAGAGTGACGAGGAGGAGGGAG
GTACAGCCCCATAGAGGAGACGGTCAAGAAATGGATGGGAAAGAAATTGG
TTGGAGATGGGCCGTGTGTCTTTATAGGGAGGCTTAATTGTGAAAGAAAA
AAGAAAAGAAATCCAACATTAGAGAATTG back to topCoding sequence (CDS) from alignment at KK037261.1:72693..74921- >rna10073 ID=rna10073|Name=rna10073|organism=Nannochloropsis gaditana|type=CDS|length=4230bp|location=Sequence derived from alignment at KK037261.1:72693..74921- (Nannochloropsis gaditana)
CCTGCACAAGCTCCACGACGAGAGCAAGGACAAGCCTTTCGAATTGGAGA
TGGCCTGGGTAACGGCAGCGAACGGCTACAAGGCCCAGAGGGTGCCCCGG
GACATAGTGTAAAAATTTTTTGGCGCGGCGCTGGGAAAAGGCCGGCAAGG
AGCGAAGACAGAGATCGAGAAGCTGAAACTGACAGAAACCACCTGCGACG
ATGCGGTGAAGGAGATGGCTAAGATTCCTGGCCGATCGCCTCGCACAGTT
TGTCCACTATTTTACCCTCAACTACTCCTTGCGGCCCTTCGGCGCCTCCG
TCCTCATTGCTGGCCACGACGCCTTCACCGACAGCATTGAGCTTAACGTG
ATCGAGCCCTCCGGAGTCGCCTACGACTGGTCTCGGACGGGCGGCAGGTA
GTAAATCGAGCCCGGGAGGAAGCCGAGAACTACAAGGACAACTACGGAAG
CGACATGCCCCCCACAACGGCACAGCCATTGGCCTGAAGTGCAAAGACGG
GGTCATTCTAGCCGTGGAAAATCTTATGCTCTCAAAGTTACTGGTGTCCA
ACTCGAACAGGCGGACATATAATGTGGGCTCTCACATTTCCATCGCTGTA
GCAGATGAGCTCTACGGGTGCTGGGTATGATGTGTCACCCACCACATTCT
CGCCGGACGGACGACTTTTTCAAGTAGAGTATGCTGGCAAGGCCGTGGAG
AACAGCCTGCACAAGCTCCACGACGAGAGCAAGGACAAGCCTTTCGAATT
GGAGATGGCCTGGGTAACGGCAGCGAACGGCTACAAGGCCCAGAGGGTGC
CCCGGGACATAGTGTAAAAATTTTTTGGCGCGGCGCTGGGAAAAGGCCGG
CAAGGAGCGAAGACAGAGATCGAGAAGCTGAAACTGACAGAAACCACCTG
CGACGATGCGGTGAAGGAGATGGCTAAGATTCCTGGCCGATCGCCTCGCA
CAGTTTGTCCACTATTTTACCCTCAACTACTCCTTGCGGCCCTTCGGCGC
CTCCGTCCTCATTGCTGGCCACGACGCCTTCACCGACAGCATTGAGCTTA
ACGTGATCGAGCCCTCCGGAGTCGCCTACGACTGGTCTCGGACGGGCGGC
AGGTAGTAAATCGAGCCCGGGAGGAAGCCGAGAACTACAAGGACAACTAC
GGAAGCGACATGCCCCCCACAACGGCACAGCCATTGGCCTGAAGTGCAAA
GACGGGGTCATTCTAGCCGTGGAAAATCTTATGCTCTCAAAGTTACTGGT
GTCCAACTCGAACAGGCGGACATATAATGTGGGCTCTCACATTTCCATCG
CTGTAGCAGATGAGCTCTACGGGTGCTGGGTATGATGTGTCACCCACCAC
ATTCTCGCCGGACGGACGACTTTTTCAAGTAGAGTATGCTGGCAAGGCCG
TGGAGAACAGCCTGCACAAGCTCCACGACGAGAGCAAGGACAAGCCTTTC
GAATTGGAGATGGCCTGGGTAACGGCAGCGAACGGCTACAAGGCCCAGAG
GGTGCCCCGGGACATAGTGTAAAAATTTTTTGGCGCGGCGCTGGGAAAAG
GCCGGCAAGGAGCGAAGACAGAGATCGAGAAGCTGAAACTGACAGAAACC
ACCTGCGACGATGCGGTGAAGGAGATGGCTAAGATTCCTGGCCGATCGCC
TCGCACAGTTTGTCCACTATTTTACCCTCAACTACTCCTTGCGGCCCTTC
GGCGCCTCCGTCCTCATTGCTGGCCACGACGCCTTCACCGACAGCATTGA
GCTTAACGTGATCGAGCCCTCCGGAGTCGCCTACGACTGGTCTCGGACGG
GCGGCAGGTAGTAAATCGAGCCCGGGAGGAAGCCGAGAACTACAAGGACA
ACTACGGAAGCGACATGCCCCCCACAACGGCACAGCCATTGGCCTGAAGT
GCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTTATGCTCTCAAAGTTA
CTGGTGTCCAACTCGAACAGGCGGACATATAATGTGGGCTCTCACATTTC
CATCGCTGTAGCAGATGAGCTCTACGGGTGCTGGGTATGATGTGTCACCC
ACCACATTCTCGCCGGACGGACGACTTTTTCAAGTAGAGTATGCTGGCAA
GGCCGTGGAGAACAGCCTGCACAAGCTCCACGACGAGAGCAAGGACAAGC
CTTTCGAATTGGAGATGGCCTGGGTAACGGCAGCGAACGGCTACAAGGCC
CAGAGGGTGCCCCGGGACATAGTGTAAAAATTTTTTGGCGCGGCGCTGGG
AAAAGGCCGGCAAGGAGCGAAGACAGAGATCGAGAAGCTGAAACTGACAG
AAACCACCTGCGACGATGCGGTGAAGGAGATGGCTAAGATTCCTGGCCGA
TCGCCTCGCACAGTTTGTCCACTATTTTACCCTCAACTACTCCTTGCGGC
CCTTCGGCGCCTCCGTCCTCATTGCTGGCCACGACGCCTTCACCGACAGC
ATTGAGCTTAACGTGATCGAGCCCTCCGGAGTCGCCTACGACTGGTCTCG
GACGGGCGGCAGGTAGTAAATCGAGCCCGGGAGGAAGCCGAGAACTACAA
GGACAACTACGGAAGCGACATGCCCCCCACAACGGCACAGCCATTGGCCT
GAAGTGCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTTATGCTCTCAA
AGTTACTGGTGTCCAACTCGAACAGGCGGACATATAATGTGGGCTCTCAC
ATTTCCATCGCTGTAGCAGATGAGCTCTACGGGTGCTGGGTATGATGTGT
CACCCACCACATTCTCGCCGGACGGACGACTTTTTCAAGTAGAGTATGCT
GGCAAGGCCGTGGAGAACAGCCTGCACAAGCTCCACGACGAGAGCAAGGA
CAAGCCTTTCGAATTGGAGATGGCCTGGGTAACGGCAGCGAACGGCTACA
AGGCCCAGAGGGTGCCCCGGGACATAGTGTAAAAATTTTTTGGCGCGGCG
CTGGGAAAAGGCCGGCAAGGAGCGAAGACAGAGATCGAGAAGCTGAAACT
GACAGAAACCACCTGCGACGATGCGGTGAAGGAGATGGCTAAGATTCCTG
GCCGATCGCCTCGCACAGTTTGTCCACTATTTTACCCTCAACTACTCCTT
GCGGCCCTTCGGCGCCTCCGTCCTCATTGCTGGCCACGACGCCTTCACCG
ACAGCATTGAGCTTAACGTGATCGAGCCCTCCGGAGTCGCCTACGACTGG
TCTCGGACGGGCGGCAGGTAGTAAATCGAGCCCGGGAGGAAGCCGAGAAC
TACAAGGACAACTACGGAAGCGACATGCCCCCCACAACGGCACAGCCATT
GGCCTGAAGTGCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTTATGCT
CTCAAAGTTACTGGTGTCCAACTCGAACAGGCGGACATATAATGTGGGCT
CTCACATTTCCATCGCTGTAGCAGATGAGCTCTACGGGTGCTGGGTATGA
TGTGTCACCCACCACATTCTCGCCGGACGGACGACTTTTTCAAGTAGAGT
ATGCTGGCAAGGCCGTGGAGAACAGCCTGCACAAGCTCCACGACGAGAGC
AAGGACAAGCCTTTCGAATTGGAGATGGCCTGGGTAACGGCAGCGAACGG
CTACAAGGCCCAGAGGGTGCCCCGGGACATAGTGTAAAAATTTTTTGGCG
CGGCGCTGGGAAAAGGCCGGCAAGGAGCGAAGACAGAGATCGAGAAGCTG
AAACTGACAGAAACCACCTGCGACGATGCGGTGAAGGAGATGGCTAAGAT
TCCTGGCCGATCGCCTCGCACAGTTTGTCCACTATTTTACCCTCAACTAC
TCCTTGCGGCCCTTCGGCGCCTCCGTCCTCATTGCTGGCCACGACGCCTT
CACCGACAGCATTGAGCTTAACGTGATCGAGCCCTCCGGAGTCGCCTACG
ACTGGTCTCGGACGGGCGGCAGGTAGTAAATCGAGCCCGGGAGGAAGCCG
AGAACTACAAGGACAACTACGGAAGCGACATGCCCCCCACAACGGCACAG
CCATTGGCCTGAAGTGCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTT
ATGCTCTCAAAGTTACTGGTGTCCAACTCGAACAGGCGGACATATAATGT
GGGCTCTCACATTTCCATCGCTGTAGCAGATGAGCTCTACGGGTGCTGGG
TATGATGTGTCACCCACCACATTCTCGCCGGACGGACGACTTTTTCAAGT
AGAGTATGCTGGCAAGGCCGTGGAGAACAG back to top
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