EWM20632.1, cds10042 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|585100418|gb|EWM20632.1| (proteasome subunit alpha type 3 [Nannochloropsis gaditana]) HSP 1 Score: 485.723 bits (1249), Expect = 9.428e-174 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV
Sbjct: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|553194011|ref|XP_005855873.1| (20S proteasome subunit alpha 7 [Nannochloropsis gaditana CCMP526] >gi|422293182|gb|EKU20482.1| 20S proteasome subunit alpha 7 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 484.182 bits (1245), Expect = 1.219e-172 Identity = 233/234 (99.57%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIEL+VIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV
Sbjct: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELHVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|299117379|emb|CBN75335.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 337.421 bits (864), Expect = 1.059e-114 Identity = 153/231 (66.23%), Postives = 192/231 (83.12%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPR 231
MSSTGAGYD+S TTFSPDG++FQVEYA KAVENSGTA+G++CKDGV+LAVE L++SK+LV+ SNRR + V H+ +AVAGL +D RQ+V R R+E Y +NYGS MPP++LADRLAQ+VHYFTL+ SLRPFGASVL+AG+D EL V+EPSGV Y++FGAA+GKGRQ AKTE+EKLK + TC +A+K++ KILH LHDE+KDKPFELEM+WV +G+K Q VP+
Sbjct: 1 MSSTGAGYDLSATTFSPDGKIFQVEYATKAVENSGTAMGVRCKDGVLLAVEKLLISKMLVAGSNRRVHGVSKHVGMAVAGLSADARQIVYRGRDEVAGYIENYGSQMPPSMLADRLAQYVHYFTLHGSLRPFGASVLVAGYDVELKKHELYVVEPSGVMYRYFGAAVGKGRQAAKTEMEKLKFDDMTCKEAMKQVCKILHVLHDEAKDKPFELEMSWVCEESGWKYQAVPQ 231
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|676394471|ref|XP_009040513.1| (hypothetical protein AURANDRAFT_55034 [Aureococcus anophagefferens] >gi|323448884|gb|EGB04777.1| hypothetical protein AURANDRAFT_55034 [Aureococcus anophagefferens]) HSP 1 Score: 316.62 bits (810), Expect = 1.822e-106 Identity = 142/234 (60.68%), Postives = 188/234 (80.34%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
M+STGAGYD+SPTTFSPDGR+FQVEYA KAVEN+GT +G+KCKDGV+L VE +MLSK+L+ +SNRR V +H +A AGL +DGRQVV RAREE +NY++ YG +PPT+LA RL+++VHYFT++ +LRPFG S +IA +D + +L V+EP+GV ++FGAALGKGRQ AK+EIEKL LT TC DA+KE+AK+++ +DESKDKPF LEMAW+ ++ Q VP+D++
Sbjct: 1 MASTGAGYDLSPTTFSPDGRIFQVEYATKAVENAGTVVGMKCKDGVVLGVEKVMLSKMLLPSSNRRVATVSAHAGVAQAGLAADGRQVVARAREECDNYEEVYGIPIPPTVLAQRLSEYVHYFTIHGALRPFGTSTMIAAYDEREKAHQLYVLEPTGVCLRYFGAALGKGRQSAKSEIEKLDLTTLTCRDALKEIAKMIYTCYDESKDKPFILEMAWLCEETKFEYQLVPQDLI 234
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|1173961130|gb|OQS07191.1| (proteasome subunit alpha type-3 [Thraustotheca clavata]) HSP 1 Score: 305.449 bits (781), Expect = 4.121e-102 Identity = 143/233 (61.37%), Postives = 184/233 (78.97%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDI 233
MSSTGAGYD+S TFSPDGR+FQVEYA KAVE+SGTAIG+ C DGV++ VE ++LSK+LV ++RR + V H+ +A+AGLV+DGRQ+VNRAREEA YK NYGS +PP ILADR++Q+VHYFTL S+RPFG S+++AG D T LNVIEPSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +A+K +AKIL+ LHDE K PFELE++W+ + ++ Q VP +I
Sbjct: 1 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRIHAVDRHVGLAMAGLVADGRQLVNRAREEASGYKKNYGSAIPPQILADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNI 232
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|669141560|ref|XP_008606342.1| (20S proteasome subunit alpha 7 [Saprolegnia diclina VS20] >gi|530741626|gb|EQC39868.1| 20S proteasome subunit alpha 7 [Saprolegnia diclina VS20]) HSP 1 Score: 304.294 bits (778), Expect = 1.066e-101 Identity = 141/233 (60.52%), Postives = 185/233 (79.40%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDI 233
MSSTGAGYD+S TFSPDGR+FQVEYA KAVE+SGTAIG+ C DGV++ VE ++LSK+LV ++RR + + H+ +A+AGLV+DGRQ+VNRAREEA +YK NYGS +PP +LADR++Q+VHYFTL S+RPFG S+++AG D T LNVIEPSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +A+K +AKIL+ LHDE K PFELE++W+ + ++ Q VP +I
Sbjct: 1 MSSTGAGYDLSVGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRVHAIDRHVGLAMAGLVADGRQLVNRAREEASSYKKNYGSPIPPQVLADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNI 232
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|813194188|ref|XP_012208428.1| (hypothetical protein SPRG_14081 [Saprolegnia parasitica CBS 223.65] >gi|641526490|gb|KDO20850.1| hypothetical protein SPRG_14081 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 304.294 bits (778), Expect = 1.102e-101 Identity = 142/233 (60.94%), Postives = 184/233 (78.97%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDI 233
MSSTGAGYD+S TFSPDGR+FQVEYA KAVE+SGTAIG+ C DGV++ VE ++LSK+LV ++RR + + HI +A+AGLV+DGRQ+VNRAREEA YK NYGS +PP +LADR++Q+VHYFTL S+RPFG S+++AG D T LNVIEPSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +A+K +AKIL+ LHDE K PFELE++W+ + ++ Q VP +I
Sbjct: 1 MSSTGAGYDLSVGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRVHAIDRHIGLAMAGLVADGRQLVNRAREEASGYKKNYGSPIPPQVLADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNI 232
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|971511704|dbj|GAQ86485.1| (20S proteasome regulatory subunit alpha protein [Klebsormidium nitens]) HSP 1 Score: 300.827 bits (769), Expect = 2.500e-100 Identity = 136/234 (58.12%), Postives = 184/234 (78.63%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
MSS G GYD+S TTFSPDGR+FQ EYA KAV+NSGTA+G++CKDG++L VE L++SK+LV SNRR +V HI +A AGLV+DGRQ+VNRAR EA NYK YG +P ++ADR+A FVH +TL +S+RPFG+SVL+ +D + +L IEP+G++++FFG A+GKGRQ AKTEIEKLKL+E TC + V +AKI++ +HDE+KDK FELE++W+ +G + +RVP D++
Sbjct: 1 MSSIGTGYDLSSTTFSPDGRVFQTEYATKAVDNSGTAVGIRCKDGIVLGVEKLVISKMLVEGSNRRILSVDRHIGVATAGLVADGRQIVNRARAEASNYKTFYGDAIPGQVIADRVATFVHLYTLYWSVRPFGSSVLLGVYD--KEGPQLYAIEPTGISHRFFGTAIGKGRQAAKTEIEKLKLSEMTCREGVTAVAKIIYGVHDEAKDKAFELELSWICEESGREHKRVPADVL 232
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|1173936382|gb|OQR87341.1| (proteasome subunit alpha type-3 [Achlya hypogyna]) HSP 1 Score: 299.671 bits (766), Expect = 7.353e-100 Identity = 139/233 (59.66%), Postives = 183/233 (78.54%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDI 233
MSSTGAGYD+S TFSPDGR+FQVEYA KAV++SGTAIG+ C DGV++ VE ++LSK+LV ++RR + V H+ + +AGLV+DGRQ+VNRAREEA YK NYGS +PP +LADR++Q+VHYFTL S+RPFG S+++AG D T LNVI+PSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +A+K +AKIL+ LHDE K PFELE++W+ + ++ Q VP +I
Sbjct: 1 MSSTGAGYDLSVGTFSPDGRIFQVEYAKKAVDSSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRIHAVDRHVGLTMAGLVADGRQLVNRAREEASGYKKNYGSPIPPQVLADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIDPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNI 232
BLAST of EWM20632.1 vs. NCBI_GenBank
Match: gi|673037976|ref|XP_008872949.1| (hypothetical protein H310_08821 [Aphanomyces invadans] >gi|574471745|gb|ETV98752.1| hypothetical protein H310_08821 [Aphanomyces invadans]) HSP 1 Score: 310.071 bits (793), Expect = 1.223e-99 Identity = 144/233 (61.80%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDI 233
MSSTGAGYD+S TFSPDGR+FQVEYA KAVENSGTAIG+ CKDGV++ VE ++LSKLLV ++RR + + H+ +A++GLV+DGRQ+VNRAREEA +YK NYGS +PP +LADR++Q+VHY+TL S+RPFG S+++AG D T LNVIEPSGV+Y+F GAA+GKG Q AKTEIEK KL + TC +A+K +AKIL+ LHDE K PFELE++W+ + ++ Q VP +I
Sbjct: 325 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVENSGTAIGINCKDGVVMGVEKILLSKLLVPGTHRRIHAIDRHVGLAISGLVADGRQLVNRAREEAASYKKNYGSPIPPQMLADRMSQYVHYYTLYGSVRPFGTSIMLAGRDVDTGKTFLNVIEPSGVSYRFRGAAMGKGEQAAKTEIEKYKLFDLTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESNWQHQLVPANI 556 The following BLAST results are available for this feature:
BLAST of EWM20632.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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