rna10068, rna10068 (mRNA) Nannochloropsis gaditana

Overview
Namerna10068
Unique Namerna10068
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length324
Alignment locationKK037261.1:57520..58737 -

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Properties
Property NameValue
ProductRhodanese-like protein
Orig transcript idgnl|cribi|Naga_101233g1.1220.mrna
Orig protein idgnl|cribi|Naga_101233g1.1220
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:57520..58737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101233g1gene9769Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10068rna10068-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20637.1cds10037Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10068 ID=rna10068|Name=rna10068|organism=Nannochloropsis gaditana|type=mRNA|length=324bp
ATGAGTCACTGCACTCCAAGCACTATTTCCACCGCTTCCTTCGACCTTCA
CACCATGCGTGTCGCTGCCTACGTGACGCTGACTTTCGCAGCCCTGACCT
CCCAAGCTCTCGCCTTCATGCCCGCAGGATCCTTGGTCAGCCCCGTCTCG
AGCTCGAAGAGCCGGCTGCTTGCGACTACAATGAGCATCGAAGTAGGAAG
CAAGCTGCCCCTCACCACCACCTTCCAGCACCTTGTGGACGGCAAGCCCA
CTGATGTCCCGGCCCTGGAACTCTTCGCAGGGAAGAAGATCGTGCTCGTC
GGTGTCCCCGGTGCTTTGACCCCC
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protein sequence of rna10068

>rna10068-protein ID=rna10068-protein|Name=rna10068|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFV
FDERVSVAPAGAGRTGKGGREGEREGGGAREDLVPPPCPGPSCESHRDAE
SLYPSARIVEPSAPSALVHLDADGREGGREGGREGRRDVVGSCQVCAQSW
DDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQR
EEREVLRSQRARRRRRKGSMTFLPASEGLTGSEMGEEIRSDARAATLEGG
GK
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mRNA from alignment at KK037261.1:57520..58737-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10068 ID=rna10068|Name=rna10068|organism=Nannochloropsis gaditana|type=mRNA|length=1218bp|location=Sequence derived from alignment at KK037261.1:57520..58737- (Nannochloropsis gaditana)
AGATCCTCATGTACTGCACGGGCGGCGTTCGGTGCGAGCGAGCAAGCGCC
TTCCTCCGATCACAGGGCTACCGAGACGTGGTGCAGCTTCGAGGTAGGGC
AAGAGGGGGGGTGGAAGGGAAGGAGAAAGGGAGGGAGGGAGGGAGGGAGA
AGAGCAGGAAAGGGACGAAAGGAAGATGGCAGGCGAGGGAGGAACAAAAA
GGAACCATGACGTGAGGGAGGCGGGGAGGGCACCTTTGACAGGGAAATGA
CGAGAGCGAGTAGGGCGGGACACAAGCGCTGGGAGACGCGACCCCACTCC
CCATTGTGAGAGAGACGAGGACGTGCTCCTCCCTGGCAGTCAACCCTGGC
CTGGCAGCCCTCTTGTGGTTCCAAAGCCTGCGCAGGGACCCTGCTTGGGG
TCTGACAGTGGTGCTAGAGGCGGCAGCGGCGGGGACACAGCCACCCCCTC
CTCACCCTCCCCCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCTGCAG
GCGGGATCGTCCGGTACCTGGAAGCCTTCCCGGAAGGAGGCTTCTTCCAC
GGCAAGAATTTTGTTTTCGACGAGCGGGTGAGCGTCGCGCCGGCAGGGGC
AGGGAGGACTGGGAAGGGAGGGCGGGAGGGAGAGAGGGAGGGAGGGGGTG
CAAGGGAGGACCTGGTACCTCCCCCTTGTCCCGGTCCGTCCTGTGAGTCT
CACCGGGACGCGGAGTCTCTGTATCCCAGTGCCCGGATTGTGGAACCGTC
TGCCCCTTCAGCCTTGGTGCACTTGGATGCGGATGGGAGGGAAGGAGGGA
GGGAGGGAGGAAGGGAGGGAAGGAGGGATGTGGTGGGTTCTTGTCAGGTC
TGTGCGCAATCTTGGGACGACTACAAGAGCCGTACACGCTGTCGGCACTG
TCGGATGCTCCTGCTCGTGTGTGACGCGTGCCGCGACCGACCGGGGCGAT
TGGTTGAGAGAGGCGGAGAAAGGGGGGGAGCCGGGTGGCTGTGTGAGCAC
TGCCAGCCGCAACGAGAGGAGAGGGAGGTGCTTAGGAGCCAGAGGGCGAG
GAGGCGGAGAAGGAAAGGGTCGATGACGTTTTTACCAGCCTCTGAGGGCC
TCACAGGCTCTGAAATGGGAGAGGAAATTCGAAGTGACGCGAGAGCGGCC
ACCCTGGAGGGGGGTGGAAAGTAACTGAATTCCTGCACAGAGGAGAAATA
GAAGCGGAAATGGAAATG
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Coding sequence (CDS) from alignment at KK037261.1:57520..58737-

>rna10068 ID=rna10068|Name=rna10068|organism=Nannochloropsis gaditana|type=CDS|length=1518bp|location=Sequence derived from alignment at KK037261.1:57520..58737- (Nannochloropsis gaditana)
GCGGGATCGTCCGGTACCTGGAAGCCTTCCCGGAAGGAGGCTTCTTCCAC
GGCAAGAATTTTGTTTTCGACGAGCGGGTGAGCGTCGCGCCGGCAGGGGC
AGGGAGGACTGGGAAGGGAGGGCGGGAGGGAGAGAGGGAGGGAGGGGGTG
CAAGGGAGGACCTGGTACCTCCCCCTTGTCCCGGTCCGTCCTGTGAGTCT
CACCGGGACGCGGAGTCTCTGTATCCCAGTGCCCGGATTGTGGAACCGTC
TGCCCCTTCAGCCTTGGTGCACTTGGATGCGGATGGGAGGGAAGGAGGGA
GGGAGGGAGGAAGGGAGGGAAGGAGGGATGTGGTGGGTTCTTGTCAGGTC
TGTGCGCAATCTTGGGACGACTACAAGAGCCGTACACGCTGTCGGCACTG
TCGGATGCTCCTGCTCGTGTGTGACGCGTGCCGCGACCGACCGGGGCGAT
TGGTTGAGAGAGGCGGAGAAAGGGGGGGAGCCGGGTGGCTGTGTGAGCAC
TGCCAGCCGCAACGAGAGGAGAGGGAGGTGCTTAGGAGCCAGAGGGCGAG
GAGGCGGAGAAGGAAAGGGTCGATGACGTTTTTACCAGCCTCTGAGGGCC
TCACAGGCTCTGAAATGGGAGAGGAAATTCGAAGTGACGCGAGAGCGGCC
ACCCTGGAGGGGGGTGGAAAGTAAATGTACTGCACGGGCGGCGTTCGGTG
CGAGCGAGCAAGCGCCTTCCTCCGATCACAGGGCTACCGAGACGTGGTGC
AGCTTCGAGGCGGGATCGTCCGGTACCTGGAAGCCTTCCCGGAAGGAGGC
TTCTTCCACGGCAAGAATTTTGTTTTCGACGAGCGGGTGAGCGTCGCGCC
GGCAGGGGCAGGGAGGACTGGGAAGGGAGGGCGGGAGGGAGAGAGGGAGG
GAGGGGGTGCAAGGGAGGACCTGGTACCTCCCCCTTGTCCCGGTCCGTCC
TGTGAGTCTCACCGGGACGCGGAGTCTCTGTATCCCAGTGCCCGGATTGT
GGAACCGTCTGCCCCTTCAGCCTTGGTGCACTTGGATGCGGATGGGAGGG
AAGGAGGGAGGGAGGGAGGAAGGGAGGGAAGGAGGGATGTGGTGGGTTCT
TGTCAGGTCTGTGCGCAATCTTGGGACGACTACAAGAGCCGTACACGCTG
TCGGCACTGTCGGATGCTCCTGCTCGTGTGTGACGCGTGCCGCGACCGAC
CGGGGCGATTGGTTGAGAGAGGCGGAGAAAGGGGGGGAGCCGGGTGGCTG
TGTGAGCACTGCCAGCCGCAACGAGAGGAGAGGGAGGTGCTTAGGAGCCA
GAGGGCGAGGAGGCGGAGAAGGAAAGGGTCGATGACGTTTTTACCAGCCT
CTGAGGGCCTCACAGGCTCTGAAATGGGAGAGGAAATTCGAAGTGACGCG
AGAGCGGCCACCCTGGAGGGGGGTGGAAAGTAAATGTACTGCACGGGCGG
CGTTCGGTGCGAGCGAGCAAGCGCCTTCCTCCGATCACAGGGCTACCGAG
ACGTGGTGCAGCTTCGAG
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Synonyms
Publications