EWM20637.1, cds10037 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|585100431|gb|EWM20637.1| (Rhodanese-like protein [Nannochloropsis gaditana]) HSP 1 Score: 496.893 bits (1278), Expect = 1.484e-177 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTGKGGREGEREGGGAREDLVPPPCPGPSCESHRDAESLYPSARIVEPSAPSALVHLDADGREGGREGGREGRRDVVGSCQVCAQSWDDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQREEREVLRSQRARRRRRKGSMTFLPASEGLTGSEMGEEIRSDARAATLEGGGK 252
MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTGKGGREGEREGGGAREDLVPPPCPGPSCESHRDAESLYPSARIVEPSAPSALVHLDADGREGGREGGREGRRDVVGSCQVCAQSWDDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQREEREVLRSQRARRRRRKGSMTFLPASEGLTGSEMGEEIRSDARAATLEGGGK
Sbjct: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTGKGGREGEREGGGAREDLVPPPCPGPSCESHRDAESLYPSARIVEPSAPSALVHLDADGREGGREGGREGRRDVVGSCQVCAQSWDDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQREEREVLRSQRARRRRRKGSMTFLPASEGLTGSEMGEEIRSDARAATLEGGGK 252
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|1173954711|gb|OQS01894.1| (hypothetical protein THRCLA_05671 [Thraustotheca clavata]) HSP 1 Score: 97.4413 bits (241), Expect = 1.227e-20 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTGK 67
MYCTGG+RCE+AS FLRS+G DV L+GGI RYLE FP+GGFF GKNFVFD+RV + P A G
Sbjct: 59 MYCTGGIRCEKASQFLRSKGVTDVHHLKGGIHRYLEKFPDGGFFQGKNFVFDKRVLMGPQSADVVGN 125
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|813157465|ref|XP_012202081.1| (hypothetical protein SPRG_07557 [Saprolegnia parasitica CBS 223.65] >gi|641533313|gb|KDO27308.1| hypothetical protein SPRG_07557 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 99.3673 bits (246), Expect = 1.858e-20 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTG 66
MYCTGG+RCE+AS FLRS+G +DV L+GGI RYLE FP+GGFF GKNFVFD+RV + P A G
Sbjct: 212 MYCTGGIRCEKASQFLRSKGIKDVHHLKGGIHRYLEQFPDGGFFQGKNFVFDKRVLMGPTTADVVG 277
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|669144906|ref|XP_008608015.1| (hypothetical protein SDRG_04132 [Saprolegnia diclina VS20] >gi|530740181|gb|EQC38423.1| hypothetical protein SDRG_04132 [Saprolegnia diclina VS20]) HSP 1 Score: 97.8265 bits (242), Expect = 6.751e-20 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTG 66
MYCTGG+RCE+AS FLRS+G DV L+GGI RYLE FP+GGFF GKNFVFD+RV + P A G
Sbjct: 212 MYCTGGIRCEKASQFLRSKGITDVHHLKGGIHRYLEQFPDGGFFQGKNFVFDKRVLMGPKTADVVG 277
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|1173951753|gb|OQR99560.1| (hypothetical protein ACHHYP_05755 [Achlya hypogyna]) HSP 1 Score: 96.6709 bits (239), Expect = 1.850e-19 Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTG 66
MYCTGG+RCE+AS FLR++G +DV L+GGI RYLE +P+GGFF GKNFVFD+RV + P A G
Sbjct: 205 MYCTGGIRCEKASQFLRAKGIKDVHHLKGGIHRYLEKYPDGGFFQGKNFVFDKRVLMGPESADVVG 270
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|1173961803|gb|OQS07728.1| (hypothetical protein THRCLA_00275 [Thraustotheca clavata]) HSP 1 Score: 95.1301 bits (235), Expect = 3.323e-19 Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQGYRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTGK 67
MYCTGG+RCE+ASA+LR G +V QL GGI RYLEAFP+GG F GKNFVFD+RV++A GK
Sbjct: 180 MYCTGGIRCEKASAYLRHLGLENVYQLNGGIHRYLEAFPDGGQFIGKNFVFDQRVTMASLNTQVVGK 246
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|545363470|ref|XP_005646856.1| (Phospholipase/Carboxylesterase family protein [Coccomyxa subellipsoidea C-169] >gi|384248829|gb|EIE22312.1| Phospholipase/Carboxylesterase family protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 96.6709 bits (239), Expect = 3.507e-19 Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQG--YRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRT 65
MYCTGGVRCERASA+LRS+G ++DV QL GGI RY+EAFP GG+F G+NFVFDERV+VA G+GR
Sbjct: 203 MYCTGGVRCERASAYLRSKGPAFQDVYQLEGGIQRYMEAFPLGGYFAGRNFVFDERVTVA-GGSGRV 268
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|1027089876|ref|XP_016651139.1| (PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Prunus mume]) HSP 1 Score: 96.2857 bits (238), Expect = 4.536e-19 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQG--YRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTG 66
MYCTGG+RCE ASA++RS+G Y +V QL GGI RYLE FP+GGFF GKNFVFD R+SVA + A G
Sbjct: 220 MYCTGGIRCEMASAYIRSKGAGYENVFQLFGGIQRYLEQFPDGGFFRGKNFVFDHRISVASSDANILG 287 HSP 2 Score: 62.3882 bits (150), Expect = 1.576e-7 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 138 DVVGSCQVCAQSWDDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQREEREVLRS 208
+++G+C +C S+DDY SR RC +CRML+LVCD+C+ +R G+ ++CE C+ E++ S
Sbjct: 284 NILGTCLLCGVSFDDYSSRLRCSYCRMLVLVCDSCQ-----------QRKGSVYVCELCKNHHMGVELVSS 343
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|302805560|ref|XP_002984531.1| (hypothetical protein SELMODRAFT_234558 [Selaginella moellendorffii] >gi|300147919|gb|EFJ14581.1| hypothetical protein SELMODRAFT_234558 [Selaginella moellendorffii]) HSP 1 Score: 96.2857 bits (238), Expect = 4.537e-19 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQG--YRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSV 57
MYCTGGVRCE ASA++RS+G + +V QL GGI RYLEAFPEGG+FHGKNFVFD R+SV
Sbjct: 197 MYCTGGVRCEMASAYIRSKGEEFENVYQLSGGIQRYLEAFPEGGYFHGKNFVFDHRISV 255
BLAST of EWM20637.1 vs. NCBI_GenBank
Match: gi|645221739|ref|XP_008246127.1| (PREDICTED: rhodanese-like domain-containing protein 6 isoform X2 [Prunus mume]) HSP 1 Score: 96.2857 bits (238), Expect = 4.664e-19 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 0
Query: 1 MYCTGGVRCERASAFLRSQG--YRDVVQLRGGIVRYLEAFPEGGFFHGKNFVFDERVSVAPAGAGRTG 66
MYCTGG+RCE ASA++RS+G Y +V QL GGI RYLE FP+GGFF GKNFVFD R+SVA + A G
Sbjct: 220 MYCTGGIRCEMASAYIRSKGAGYENVFQLFGGIQRYLEQFPDGGFFRGKNFVFDHRISVASSDANILG 287 HSP 2 Score: 61.6178 bits (148), Expect = 2.959e-7 Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 138 DVVGSCQVCAQSWDDYKSRTRCRHCRMLLLVCDACRDRPGRLVERGGERGGAGWLCEHCQPQREEREVLRS 208
+++G+C +C S+DDY SR RC +CRML+LVCD+C +R G+ ++CE C+ E++ S
Sbjct: 284 NILGTCLLCGVSFDDYSSRLRCSYCRMLVLVCDSC------------QRKGSVYVCELCKNHHMGVELVSS 342 The following BLAST results are available for this feature:
BLAST of EWM20637.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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