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Properties
| Property Name | Value |
|---|
| Product | 5 deoxy cytosolic type c protein domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100228g3.4660.mrna |
| Orig protein id | gnl|cribi|Naga_100228g3.4660 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037261.1 | supercontig | KK037261.1:29496..31440 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10061 ID=rna10061|Name=rna10061|organism=Nannochloropsis gaditana|type=mRNA|length=711bp
ATGGATCTAAGTGCACTCCCTTTTTTTAAATCGCTCGAAAGCTCAAGGAT
AAGCTGTGGATACCCGGGAGGAAGCCAGACTTTTAAAAGGAAACCTCCCA
ATGTTCGCAAACTTTGCTGCCAAGACACCATAAACAAGTACGAGCGATCA
AGCGAGCAGCAGGCCGTTAGAATGGACGAGGCTTGTTCCCTTTTCCGACA
AGGCGTCACGTCAGTTTTTAAGCAGTGGATGGTTCTCCACCTTGCCGTGA
CCAATAATTGGGGTGGCGGCGACAGCTACCGAAAAGCCACCTTGCTCTTG
GAGGAAACCTTGCGCCTTTTCGTCCCTCCCCCCCTCGCTCGAACCGCCCA
CCGACCCAAGAAACTCCCCACGCCTGAGGAACTCGAGGAAAAATTGGGGG
ACTACATGGAGGAGCAATTTGGAACGCTGGTGGAGGACGGGAGCTTGGAA
GAAGTGAGTGCCTGGGTGTGTAACCTCTGGGAGGAGTGCAAGGAGGGAAG
GAGGGAGGGGGTGACGAAGGTGTGCGCGCAGGAGGCCGCCGTGCTGAGGC
TGCAGCAGCGCTGGAGTGAGTCAGGGTTCGAGAGTGACGAGGAAGGCGAT
GGAGGGAGGGAGGAAAAGGCGGGAAGAATGATCGGAAAGTATCGATTGTT
TTTGTGTCGTGCGAAGGACCTTGGAGTGACCGTGTGCTCATTAGGATTGA
GCTTTTTTTAA back to topprotein sequence of rna10061 >rna10061-protein ID=rna10061-protein|Name=rna10061|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MSGTMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSY
DFVHVWGGTREEANAKVLAFFKSSHFQASTFMWSPPASFASNERQRSGCK
SIIRVSLPASTTATTTRPLDPNALKGTCARPSRLSSWLTTPSDMPTKSLK
TLAFQSSSLETMLGIKRTRLFLPPPCLRPSPVSRGGRMSACTSRHCWPAI
GSNIEREVVVRRKKCGKEGISQDEEESEWRRRCEYSRNSARILKVFLSLF
TAVLNQSSL back to topmRNA from alignment at KK037261.1:29496..31440- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10061 ID=rna10061|Name=rna10061|organism=Nannochloropsis gaditana|type=mRNA|length=1945bp|location=Sequence derived from alignment at KK037261.1:29496..31440- (Nannochloropsis gaditana)
ATGGTAAAACCACACTTCATGGACCAGAAGAATCCCTATGGTCGAATTGT
AGCGTTACTAGACCCCGATATCCTGTGTACCGTTATACCCTTTCCCTTCT
CATCCACATTTTCTCTCCTCTCTTTTCTTTGCTCCCGACTTCCCTATACC
TCCTCCAGAGTGGCACCATGAGCTCGATCTCCAGACCTCCTCTGGTGGTG
GCGGTGGATTTGGACGAGGTGCTTGGCTTGTTCGTGGAGACCCTTGCTCG
CTTTCACAATGAGGTGTATGGAGGCTCCTTGACGGCGGGTAAGCATCCGG
ACGATAGGGGGTTGAGGAAAGTGTGACGACAGCCTACTGCCGCGCCAGGA
AAGGGACAAGAACGGGGCGTGAAATGACGGATACCGGGACGCTGACGACT
CACCGGGGCTAGAGGCGGCTGTCTAGATGGAATACCAAGACCTGAGTGTC
CCCTTACGGGGCCCGAAAGCCAGCCCGTCCCACGTTCCTCACCCGTGGTA
CTCCCTTGAAGATCCGTGCCTAGAAAGCATCATCCTTTTCATTTTGTAGA
CTCGTGTCTCCCCCAGACGATTTCCACAGTTACGACTTTGTGCACGTGTG
GGGGGGCACCCGGGAGGAGGCGAACGCGAAAGTGCTGGCCTTTTTCAAGT
CCAGCCATTTCCAGGTGAGTAACCCTGGGTAGAAATTCTCAAAAAGGCGC
GAAAGTGTTTTGAACGTGTGCCCCAGATGTTGATGACGCTCCCTTCATAT
ACATGCAGGAGGATCTCCCCCCCATCCGTGACGCCTTCCCCGTGCTGAAG
GCCCTCAAAGACGAGGGTGAATATCTGCAACCCTCCCTCCTTCCATCCCT
CCTCTCTCTCCCTCCCTCCTTCCCTTCCACCCTTCCTCACTCTGACGTCC
CTTCTTCCCCCCTCTTTCTCTTCCATCGATGCCGCCGGCCCCATGGCTTT
TTACCTCCTTCTTTCGCTCCCTATGTTCATTGGTCTCCCTCCCCTCTATC
TCCGTTTTCTCACTCCCTTTCCCTCCTCTCCCTCTCCCTCCCTTCAGGCG
TCGACTTTCATGTGGTCACCTCCCGCCAGTTTTGCATCCAACGAGAGACA
GAGGAGTGGGTGCAAAAGCATTATCCGGGTATCTTTACCGGCCTCCACTA
CGGCAACCACTACTCGGGTACGGTCCCCCCTTCTTCCCTCCGTCCCACCC
TTCCTCCCTTGCCCCCTACTCTCACTTGCTGTATTCAGGAGGCAATGTTA
TCTCATTACGTCTAATCTTCTACTCTTGACCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTCAGCCACTGGACCCCAACGCTCTAAAGGGGACATGTGCCA
GGCCATCAAGGCTCAGCTCCTGGTTGACGACTCCCTCCGATATGCCCACC
AAGTCGCTCAAGACGCTGGCATTCCAGTCCTCCTCTTTGGTGCGTGGCAC
TTGCGTCGGGGGGCAGCGTCCGCAGGGATCCCTCCCAGACTCGGAGCCGT
CCATGTCCTTGGTCTCTCCACCATTCGTTCCTTCCCCACGAACTTTATTT
TTCACCTCTCTCTCCCACCCTCCTCTTTTCTGTGTCCCTTTTGATCCCTG
TCGTCGCTCCTCCGTCCCTCCCTCGGTCCCCGCATGGCTCAGGAGACTAT
GCTTGGAATCAAGCGGACCCGTCTCTTCCTCCCTCCTCCCTGCCTCCGTC
CATCACCCGTGTCACGCGGTGGGAGGATGTCCGCGTGCACATCGAGGCAT
TGCTGGCCAGCCATCGGCAGCAACATAGAGAGAGAGGTGGTGGTGAGACG
TAAGAAATGTGGAAAAGAGGGAATAAGCCAAGATGAAGAGGAATCAGAAT
GGAGGAGGAGATGTGAGTATTCAAGGAACTCAGCAAGGATTTTAAAAGTT
TTTCTATCTTTATTCACAGCAGTATTGAATCAAAGTAGTCTTTAA back to topCoding sequence (CDS) from alignment at KK037261.1:29496..31440- >rna10061 ID=rna10061|Name=rna10061|organism=Nannochloropsis gaditana|type=CDS|length=4680bp|location=Sequence derived from alignment at KK037261.1:29496..31440- (Nannochloropsis gaditana)
GAGACTATGCTTGGAATCAAGCGGACCCGTCTCTTCCTCCCTCCTCCCTG
CCTCCGTCCATCACCCGTGTCACGCGGTGGGAGGATGTCCGCGTGCACAT
CGAGGCATTGCTGGCCAGCCATCGGCAGCAACATAGAGAGAGAGGTGGTG
GTGAGACGTAAGAAATGTGGAAAAGAGGGAATAAGCCAAGATGAAGAGGA
ATCAGAATGGAGGAGGAGATGTGAGTATTCAAGGAACTCAGCAAGGATTT
TAAAAGTTTTTCTATCTTTATTCACAGCAGTATTGAATCAAAGTAGTCTT
TAACCACTGGACCCCAACGCTCTAAAGGGGACATGTGCCAGGCCATCAAG
GCTCAGCTCCTGGTTGACGACTCCCTCCGATATGCCCACCAAGTCGCTCA
AGACGCTGGCATTCCAGTCCTCCTCTTTGGCGTCGACTTTCATGTGGTCA
CCTCCCGCCAGTTTTGCATCCAACGAGAGACAGAGGAGTGGGTGCAAAAG
CATTATCCGGGTATCTTTACCGGCCTCCACTACGGCAACCACTACTCGGA
CGATTTCCACAGTTACGACTTTGTGCACGTGTGGGGGGGCACCCGGGAGG
AGGCGAACGCGAAAGTGCTGGCCTTTTTCAAGTCCAGCCATTTCCAGAGT
GGCACCATGAGCTCGATCTCCAGACCTCCTCTGGTGGTGGCGGTGGATTT
GGACGAGGTGCTTGGCTTGTTCGTGGAGACCCTTGCTCGCTTTCACAATG
AGGTGTATGGAGGCTCCTTGACGGCGGATGGAGACTATGCTTGGAATCAA
GCGGACCCGTCTCTTCCTCCCTCCTCCCTGCCTCCGTCCATCACCCGTGT
CACGCGGTGGGAGGATGTCCGCGTGCACATCGAGGCATTGCTGGCCAGCC
ATCGGCAGCAACATAGAGAGAGAGGTGGTGGTGAGACGTAAGAAATGTGG
AAAAGAGGGAATAAGCCAAGATGAAGAGGAATCAGAATGGAGGAGGAGAT
GTGAGTATTCAAGGAACTCAGCAAGGATTTTAAAAGTTTTTCTATCTTTA
TTCACAGCAGTATTGAATCAAAGTAGTCTTTAACCACTGGACCCCAACGC
TCTAAAGGGGACATGTGCCAGGCCATCAAGGCTCAGCTCCTGGTTGACGA
CTCCCTCCGATATGCCCACCAAGTCGCTCAAGACGCTGGCATTCCAGTCC
TCCTCTTTGGCGTCGACTTTCATGTGGTCACCTCCCGCCAGTTTTGCATC
CAACGAGAGACAGAGGAGTGGGTGCAAAAGCATTATCCGGGTATCTTTAC
CGGCCTCCACTACGGCAACCACTACTCGGACGATTTCCACAGTTACGACT
TTGTGCACGTGTGGGGGGGCACCCGGGAGGAGGCGAACGCGAAAGTGCTG
GCCTTTTTCAAGTCCAGCCATTTCCAGAGTGGCACCATGAGCTCGATCTC
CAGACCTCCTCTGGTGGTGGCGGTGGATTTGGACGAGGTGCTTGGCTTGT
TCGTGGAGACCCTTGCTCGCTTTCACAATGAGGTGTATGGAGGCTCCTTG
ACGGCGGATGGAGACTATGCTTGGAATCAAGCGGACCCGTCTCTTCCTCC
CTCCTCCCTGCCTCCGTCCATCACCCGTGTCACGCGGTGGGAGGATGTCC
GCGTGCACATCGAGGCATTGCTGGCCAGCCATCGGCAGCAACATAGAGAG
AGAGGTGGTGGTGAGACGTAAGAAATGTGGAAAAGAGGGAATAAGCCAAG
ATGAAGAGGAATCAGAATGGAGGAGGAGATGTGAGTATTCAAGGAACTCA
GCAAGGATTTTAAAAGTTTTTCTATCTTTATTCACAGCAGTATTGAATCA
AAGTAGTCTTTAACCACTGGACCCCAACGCTCTAAAGGGGACATGTGCCA
GGCCATCAAGGCTCAGCTCCTGGTTGACGACTCCCTCCGATATGCCCACC
AAGTCGCTCAAGACGCTGGCATTCCAGTCCTCCTCTTTGGCGTCGACTTT
CATGTGGTCACCTCCCGCCAGTTTTGCATCCAACGAGAGACAGAGGAGTG
GGTGCAAAAGCATTATCCGGGTATCTTTACCGGCCTCCACTACGGCAACC
ACTACTCGGACGATTTCCACAGTTACGACTTTGTGCACGTGTGGGGGGGC
ACCCGGGAGGAGGCGAACGCGAAAGTGCTGGCCTTTTTCAAGTCCAGCCA
TTTCCAGAGTGGCACCATGAGCTCGATCTCCAGACCTCCTCTGGTGGTGG
CGGTGGATTTGGACGAGGTGCTTGGCTTGTTCGTGGAGACCCTTGCTCGC
TTTCACAATGAGGTGTATGGAGGCTCCTTGACGGCGGATGGAGACTATGC
TTGGAATCAAGCGGACCCGTCTCTTCCTCCCTCCTCCCTGCCTCCGTCCA
TCACCCGTGTCACGCGGTGGGAGGATGTCCGCGTGCACATCGAGGCATTG
CTGGCCAGCCATCGGCAGCAACATAGAGAGAGAGGTGGTGGTGAGACGTA
AGAAATGTGGAAAAGAGGGAATAAGCCAAGATGAAGAGGAATCAGAATGG
AGGAGGAGATGTGAGTATTCAAGGAACTCAGCAAGGATTTTAAAAGTTTT
TCTATCTTTATTCACAGCAGTATTGAATCAAAGTAGTCTTTAACCACTGG
ACCCCAACGCTCTAAAGGGGACATGTGCCAGGCCATCAAGGCTCAGCTCC
TGGTTGACGACTCCCTCCGATATGCCCACCAAGTCGCTCAAGACGCTGGC
ATTCCAGTCCTCCTCTTTGGCGTCGACTTTCATGTGGTCACCTCCCGCCA
GTTTTGCATCCAACGAGAGACAGAGGAGTGGGTGCAAAAGCATTATCCGG
GTATCTTTACCGGCCTCCACTACGGCAACCACTACTCGGACGATTTCCAC
AGTTACGACTTTGTGCACGTGTGGGGGGGCACCCGGGAGGAGGCGAACGC
GAAAGTGCTGGCCTTTTTCAAGTCCAGCCATTTCCAGAGTGGCACCATGA
GCTCGATCTCCAGACCTCCTCTGGTGGTGGCGGTGGATTTGGACGAGGTG
CTTGGCTTGTTCGTGGAGACCCTTGCTCGCTTTCACAATGAGGTGTATGG
AGGCTCCTTGACGGCGGATGGAGACTATGCTTGGAATCAAGCGGACCCGT
CTCTTCCTCCCTCCTCCCTGCCTCCGTCCATCACCCGTGTCACGCGGTGG
GAGGATGTCCGCGTGCACATCGAGGCATTGCTGGCCAGCCATCGGCAGCA
ACATAGAGAGAGAGGTGGTGGTGAGACGTAAGAAATGTGGAAAAGAGGGA
ATAAGCCAAGATGAAGAGGAATCAGAATGGAGGAGGAGATGTGAGTATTC
AAGGAACTCAGCAAGGATTTTAAAAGTTTTTCTATCTTTATTCACAGCAG
TATTGAATCAAAGTAGTCTTTAACCACTGGACCCCAACGCTCTAAAGGGG
ACATGTGCCAGGCCATCAAGGCTCAGCTCCTGGTTGACGACTCCCTCCGA
TATGCCCACCAAGTCGCTCAAGACGCTGGCATTCCAGTCCTCCTCTTTGG
CGTCGACTTTCATGTGGTCACCTCCCGCCAGTTTTGCATCCAACGAGAGA
CAGAGGAGTGGGTGCAAAAGCATTATCCGGGTATCTTTACCGGCCTCCAC
TACGGCAACCACTACTCGGACGATTTCCACAGTTACGACTTTGTGCACGT
GTGGGGGGGCACCCGGGAGGAGGCGAACGCGAAAGTGCTGGCCTTTTTCA
AGTCCAGCCATTTCCAGAGTGGCACCATGAGCTCGATCTCCAGACCTCCT
CTGGTGGTGGCGGTGGATTTGGACGAGGTGCTTGGCTTGTTCGTGGAGAC
CCTTGCTCGCTTTCACAATGAGGTGTATGGAGGCTCCTTGACGGCGGATG
GAGACTATGCTTGGAATCAAGCGGACCCGTCTCTTCCTCCCTCCTCCCTG
CCTCCGTCCATCACCCGTGTCACGCGGTGGGAGGATGTCCGCGTGCACAT
CGAGGCATTGCTGGCCAGCCATCGGCAGCAACATAGAGAGAGAGGTGGTG
GTGAGACGTAAGAAATGTGGAAAAGAGGGAATAAGCCAAGATGAAGAGGA
ATCAGAATGGAGGAGGAGATGTGAGTATTCAAGGAACTCAGCAAGGATTT
TAAAAGTTTTTCTATCTTTATTCACAGCAGTATTGAATCAAAGTAGTCTT
TAACCACTGGACCCCAACGCTCTAAAGGGGACATGTGCCAGGCCATCAAG
GCTCAGCTCCTGGTTGACGACTCCCTCCGATATGCCCACCAAGTCGCTCA
AGACGCTGGCATTCCAGTCCTCCTCTTTGGCGTCGACTTTCATGTGGTCA
CCTCCCGCCAGTTTTGCATCCAACGAGAGACAGAGGAGTGGGTGCAAAAG
CATTATCCGGGTATCTTTACCGGCCTCCACTACGGCAACCACTACTCGGA
CGATTTCCACAGTTACGACTTTGTGCACGTGTGGGGGGGCACCCGGGAGG
AGGCGAACGCGAAAGTGCTGGCCTTTTTCAAGTCCAGCCATTTCCAGAGT
GGCACCATGAGCTCGATCTCCAGACCTCCTCTGGTGGTGGCGGTGGATTT
GGACGAGGTGCTTGGCTTGTTCGTGGAGACCCTTGCTCGCTTTCACAATG
AGGTGTATGGAGGCTCCTTGACGGCGGATG back to top
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