EWM20643.1, cds10030 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|585100441|gb|EWM20643.1| (5 deoxy cytosolic type c protein domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MSGTMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQASTFMWSPPASFASNERQRSGCKSIIRVSLPASTTATTTRPLDPNALKGTCARPSRLSSWLTTPSDMPTKSLKTLAFQSSSLETMLGIKRTRLFLPPPCLRPSPVSRGGRMSACTSRHCWPAIGSNIEREVVVRRKKCGKEGISQDEEESEWRRRCEYSRNSARILKVFLSLFTAVLNQSSL 259 MSGTMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQASTFMWSPPASFASNERQRSGCKSIIRVSLPASTTATTTRPLDPNALKGTCARPSRLSSWLTTPSDMPTKSLKTLAFQSSSLETMLGIKRTRLFLPPPCLRPSPVSRGGRMSACTSRHCWPAIGSNIEREVVVRRKKCGKEGISQDEEESEWRRRCEYSRNSARILKVFLSLFTAVLNQSSL Sbjct: 1 MSGTMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQASTFMWSPPASFASNERQRSGCKSIIRVSLPASTTATTTRPLDPNALKGTCARPSRLSSWLTTPSDMPTKSLKTLAFQSSSLETMLGIKRTRLFLPPPCLRPSPVSRGGRMSACTSRHCWPAIGSNIEREVVVRRKKCGKEGISQDEEESEWRRRCEYSRNSARILKVFLSLFTAVLNQSSL 259
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|553189759|ref|XP_005855067.1| (5 deoxy cytosolic type c protein domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422293990|gb|EKU21290.1| 5 deoxy cytosolic type c protein domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 155.221 bits (391), Expect = 1.735e-43 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 Query: 5 MSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ 77 MSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ Sbjct: 1 MSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ 73
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|514700948|ref|XP_004998042.1| (hypothetical protein PTSG_11828 [Salpingoeca rosetta] >gi|326433516|gb|EGD79086.1| hypothetical protein PTSG_11828 [Salpingoeca rosetta]) HSP 1 Score: 86.2705 bits (212), Expect = 7.879e-17 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 0 Query: 1 MSGTMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ 77 ++ T RP V+AVDLDEVLG FV+ L FHN+ YG + A DFHSY F VWGGT+EE++ KV F +S HF+ Sbjct: 4 LAETFEHGKRP--VIAVDLDEVLGYFVDALCEFHNDKYGTTYKASDFHSYTFQDVWGGTKEESSKKVHDFLESKHFK 78
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|1183487625|gb|ORZ11341.1| (hypothetical protein BCR41DRAFT_338537 [Lobosporangium transversale]) HSP 1 Score: 78.1814 bits (191), Expect = 6.786e-13 Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 0 Query: 11 PPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHF 76 P V+AVDLDEVL +A FHN+ YG LT DDF SYD+ +WGGTREE+ AK FF S +F Sbjct: 9 PRKVIAVDLDEVLARTSLAVAEFHNDTYGTKLTMDDFISYDYTKIWGGTREESIAKWRLFFDSPYF 74
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|1032150433|gb|OAO14215.1| (hypothetical protein AV274_4138 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 75.485 bits (184), Expect = 6.905e-13 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 14 VVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHF 76 ++ +DLDE LG FV LA F+N +G LT DDFHSY F VWGGT+EEA+ + FFKS F Sbjct: 7 IIGLDLDECLGQFVFNLALFYNAKHGTHLTVDDFHSYSFWEVWGGTKEEASEVISEFFKSPLF 69
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|1032643575|gb|OAQ24915.1| (hypothetical protein K457DRAFT_117173 [Mortierella elongata AG-77]) HSP 1 Score: 78.1814 bits (191), Expect = 6.908e-13 Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 11 PPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHF 76 P V+AVDLDEVL +A FHN+ YG +LT DDF SYD+ +WGGTREE+ +K FF S +F Sbjct: 8 PRKVIAVDLDEVLARTTLAIADFHNDTYGTTLTMDDFISYDYTKIWGGTREESISKWRLFFDSPYF 73
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|672825604|gb|KFH70495.1| (hypothetical protein MVEG_03345 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 77.0258 bits (188), Expect = 1.896e-12 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0 Query: 11 PPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHF 76 P V+AVDLDEVL +A FHN+ YG +L DDF SYD+ +WGGTREE+ AK FF S +F Sbjct: 8 PRKVIAVDLDEVLAKTTLAIADFHNDTYGTTLAMDDFISYDYTKIWGGTREESIAKWRLFFDSPYF 73
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|544212447|ref|XP_005534943.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016934|dbj|BAM80336.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 74.7146 bits (182), Expect = 3.659e-12 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 8 ISRPP--LVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ 77 I R P +AVD+DEVL FV L FHN+ YG L A DFHSY F VWGGT +A KV FF++ FQ Sbjct: 56 IGRKPQRTCIAVDIDEVLAFFVPELCAFHNKRYGTRLQATDFHSYRFAEVWGGTDTDAIRKVHEFFRTPAFQ 127
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|1183417677|gb|ORY42052.1| (hypothetical protein BCR33DRAFT_767372 [Rhizoclosmatium globosum]) HSP 1 Score: 75.485 bits (184), Expect = 8.055e-12 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0 Query: 4 TMSSISRPPLVVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQASTFMWSPPASFAS 91 T S+ ++P V+AVD+DEVL V+ L FHNE + L A DF+SY++ VWGGT+EE+ KV F++S+HF S M P +F + Sbjct: 974 TTSTGTKP--VMAVDMDEVLCGTVQALVNFHNEAFDTQLKASDFNSYNYEEVWGGTKEESYEKVRQFYESTHF--SERMTVVPGAFEA 1057
BLAST of EWM20643.1 vs. NCBI_GenBank
Match: gi|1043301982|gb|OBZ86847.1| (hypothetical protein A0J61_05100 [Choanephora cucurbitarum]) HSP 1 Score: 74.3294 bits (181), Expect = 8.861e-12 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 0 Query: 14 VVAVDLDEVLGLFVETLARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQ 77 VVAVDLD+ L +E+L ++HN+ Y S T DF++YD+ VWGGTREE+ KV F++S HF+ Sbjct: 9 VVAVDLDQTLAHTLESLVQWHNDTYQTSYTLADFNTYDYWKVWGGTREESCLKVREFYESEHFE 72 The following BLAST results are available for this feature:
BLAST of EWM20643.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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