|
|
Properties
| Property Name | Value |
|---|
| Product | fucosyltransferase 9 |
| Orig transcript id | gnl|cribi|Naga_100289g3.2205.mrna |
| Orig protein id | gnl|cribi|Naga_100289g3.2205 |
| Gene | FucT |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037261.1 | supercontig | KK037261.1:12201..14031 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10056 ID=rna10056|Name=rna10056|organism=Nannochloropsis gaditana|type=mRNA|length=1814bp
CTATAATATTTAGTCGTATTTAGGCGTATTTTTCCAGCACATATTAATCA
ATTTTTCATTTTTGTCACTGATTGGCCAAGGGAGGAGATAAGGCAGGGTG
GCAAATGGTCGACCCTGGAAACTCGGATAGTGCACCGGAAGGGAAATCCA
AGAAATGGCTTCTAATCGGTGCACTACTGACAATCAACCTCTTAGCAGTC
TATTTCGCCATTGTTGATAGCACGGACTTCTGGGAGAAAGGGGCGACTCT
GCCAGGCTCTTCTTTACAGCTATTCCAAGCAGGTCACAATGGTAGCGATC
AAATACCCACGCTTCCTAACGACGAGCCACTAAATGAAGATCGTGAAGCT
CGGTCTAACTCATTCCTACAAATGATGGGGAAATTTCCTTGGGCCGATGC
GGTGGCTGCTTTAAACGATACGGCAAAAACCTCGCACTACACACAACTTC
TACTCGACCAACTCTCCACGAGTCTGTTACAAGAGCCCATCGTCGCCCCT
CGACCGAGCTGTCACCCGCCGCCTCTGATGCAAGCTGCCGACATCCAATG
CTCGAAGTACCCCCACGCTTTTACGCCCAAGGAACGACGTGAGAAACCCG
TCAAGGTCGCTCACCTCATCCAGATGGGCTTCGACGCCGATATGTTGGAG
GTCCTACTCCACGAACTGGATGATGTAGTGGACAAATTTTTCGTCATTGA
GTCCACAAGGACGCATAACAAGGACACCCGGAAAATCCTCATGTGGGACC
GGCTCAAATACCAACCTCGCTTCGATTTCGTGAAAGACAAAGTTGTCCAC
CTGGTCCTTGACGACTCCGAGACGTTGGTGAACCCTGAGGTTCCTTTTGC
GCGCGAAAGCCTGCAGGAAAAGGCTCGGTGGGACTCGTTCCTCAGCTGGA
ACAAGCACAGCAAATACTTCGGACCCGAAGACCTGGTAGGTTTCGGAGAT
ACCGACGAGATCCCTGCTCGCTCCAATGTCCAGCTGCTGCGACACTGCAC
AATGGCGGGTGCCTCGGTGGACATCGGATCGTGGTTCGCCCCGACCCGAC
TGGATGAGGCGTTTCGGCCCGACTGGCCCGTGCCGGGACATCCATGGACG
TTAGGGGATCCCACATATTGGACAGTAGCCTCCGCAACAGAGTACGGGAA
CGCCGGGAACCAATACCCTAGCAGAATGCGGGGAATGTCCGGGAAATTCT
TGCTCGGTGGGATCCATATGACTGACAACGGCTATTTCCCCATGCGGATG
GCCAAGCTTGTTGCCTGCACTGAGTGCAGTGATCGCGCTGTCCGCCTGAT
TCAGGACATGGCGTCATATTTCCAAGACGGCAACGCTGGAAAAGAGGTGC
TGAGTCAGCTTGACCTATATCTTAACCCAGTCTGGCCTGACCGAAAGCGG
TTTGTGGAGGGGGACATGATTAAACCGACAGTGGGGGCGGCCTACCATAT
CCCGTGGTTCCTGAAATGCAATCCCGATAGATACGCGTCTTGGTACAGAA
AGATTGACAGCCGTGTTGGGAAGCGGCGAAGGCGTTCATGGATATGAACA
ATTGCTAGAAATGTTGTCATCTTAGGGCTGTATTAGCCTCTCTTTAGGAT
GGTCGAGGAAGACTTGGCCATGAAGTGGGAGTCTCAGTCATAACAGCCCA
TATGCAGGCAGAATGCAAAGCGAGTGTATGAAAAGACAGACTAGAGACCC
AAAAGATCGATTTATTAGTCAAATTCAAAAAGAATCTTTGTAAGTGTTTT
GTCGGAGGAAGACGTACTGATTGATCATGATCTGAATGAGGAAAGAAAAA
GTGGTTTCTTTAAG back to topprotein sequence of rna10056 >rna10056-protein ID=rna10056-protein|Name=rna10056|organism=Nannochloropsis gaditana|type=polypeptide|length=432bp
MFRSPVRKLGYQTRCHNPGIRWILIILFVAWISCAFLFLHSFQSVRYKML
FSKKILPSISMAVETAQPSSSLDTYLHLRSRARQAFNITDKSISMKTEKV
DIPKRIRIAQYSHVYGADPLWNDDSGAWESCGQPCEAIGGYGDASSAATA
DVVVLDIQTFRSVPWARPAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTM
GFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCN
TDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQ
NLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAEN
LKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALN
KLEAMMALPAWASTHGREYACALCEYMHAIGS back to topmRNA from alignment at KK037261.1:12201..14031+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10056 ID=rna10056|Name=rna10056|organism=Nannochloropsis gaditana|type=mRNA|length=1831bp|location=Sequence derived from alignment at KK037261.1:12201..14031+ (Nannochloropsis gaditana)
TGCGGGCGGCAGGTAAAATTGATGAATTTCAATCTACCAAAATGAATGCT
AATATACGAGTTTCCACCATTCATTATTATCACACAGCTTGCGCTGTGAG
GCTGGTGTATTCATCGCTCTGTAGCTCGGCGCACCATGTTTCGCAGTCCT
GTGCGGAAACTTGGCTATCAAACACGTTGTCACAATCCTGGCATTCGATG
GATACTTATCATTTTATTTGTAGCATGGATTTCATGCgcatttcttttct
tacATTCCTTCCAAAGCGTGCGTTACAAAATGCTTTTCTCAAAGAAAATT
CTTCCCTCTATATCCATGGCTGTGGAAACGGCACAACCAAGCAGCAGCCT
TGACACGTATTTGCACCTGCGGTCGCGCGCCCGACAAGCGTTTAATATCA
CTGACAAATCAATAAGCATGAAAACGGAAAAGGTGGATATTCCGAAACGT
ATAAGAATCGCGCAGTACAGCCATGTATACGGTGCTGACCCTCTCTGGAA
CGACGACAGCGGTGCCTGGGAGTCCTGTGGACAGCCGTGTGAAGCAATTG
GTGGATATGGAGACGCCTCGTCAGCAGCTACCGCCGACGTGGTCGTGCTG
GACATACAAACCTTCAGATCTGTACCGTGGGCCCGACCGGCGAAACAGAT
ATGGGTGGGAACATACTTTGAGTCCCCTGATCATTACCCGAACCGGAAAA
ACCCTCAAATCATGTCACAATTCAATGTAACGATGGGGTTCCGCCCCGAT
GATGACCTTCCAGTCTTCAACATGGTGTACGATACCATGAAGGGCTTCGC
TGGCATTACTAATCTTACACTTCCGACCTGGGAAGCGAAGCAAGCCCGTC
CTGAATTGATGTCTGTCTGGATCTCCAACTGCAACACGGACCGCACGCAC
CGGAAAGATATTCTTAAGCAGCTTGCATCTTCCAAGATCTCGTATGCCTC
CTACGGCCGCTGCTGGAACACGCATTCCTCCGCGCAAGGTGTGACGGCAT
TGACGGATGCAGATTGGCGGCGCTACGGTTCTCAAAATCTGGGCGCGGAA
CTTGTCGCTGTTGCCGCTCAatacctcttcttctttgcgGCAGAGAATTC
AGATTATCCGTACTACATCACCGAAAAGGTCTTTCATGGACTTGCCGCAG
GATCAGTACCTGTCTACGTAGGGGACGCAGAGAATCTAAAGAAGATTGCC
CCACCTCATTCGATTATTTATGCGAATGATTTTGAATCCGTGGGAGCCTT
GGCTTCTCATCTGCACACGGTGGCGCAAAATCCCGAGCTTTACGAGCAAT
ATTTGAAATGGCGACAAGATTCTGACGCGCTCAACAAACTTGAAGCGATG
ATGGCTCTTCCCGCATGGGCATCCACGCACGGACGCGAATATGCATGTGC
ATTGTGTGAGTACATGCACGCCATTGGCAGCTGATTGTGACGTACACATA
CAGGCAGCTGATGTACGAGAAGCACAGTCGGCTATCACTTTCCTCCAAAG
CCGAGGGCGAACAAAGGAGTGCTCTGGCCGGAGAGAATCGAGACGAAGGC
TTGTCTGAGGGTGCTCACGCACGACAAAACAGTATTTCGAGAGTCATATT
TACTCAGTAAGGGGACGAAAAGGCGAATCAATTGCTTCGCATGGGTGCAT
AGTGCTCTTGATTATGTGTACAAATGATCATGGGCTGATTCTGCAGCGGG
ATAAAGGGTGAAGGGTATCCCTTACCAAACTTTAAAATAGCGTAGTTTCG
TCTGGTCATCAGACAGCAAATCTGAAGAAAATTTCTTGGACAACGAAATC
AATCTCACTTTTCTTGTGAATGTTTCACAGG back to topCoding sequence (CDS) from alignment at KK037261.1:12201..14031+ >rna10056 ID=rna10056|Name=rna10056|organism=Nannochloropsis gaditana|type=CDS|length=1299bp|location=Sequence derived from alignment at KK037261.1:12201..14031+ (Nannochloropsis gaditana)
ATGTTTCGCAGTCCTGTGCGGAAACTTGGCTATCAAACACGTTGTCACAA
TCCTGGCATTCGATGGATACTTATCATTTTATTTGTAGCATGGATTTCAT
GCgcatttcttttcttacATTCCTTCCAAAGCGTGCGTTACAAAATGCTT
TTCTCAAAGAAAATTCTTCCCTCTATATCCATGGCTGTGGAAACGGCACA
ACCAAGCAGCAGCCTTGACACGTATTTGCACCTGCGGTCGCGCGCCCGAC
AAGCGTTTAATATCACTGACAAATCAATAAGCATGAAAACGGAAAAGGTG
GATATTCCGAAACGTATAAGAATCGCGCAGTACAGCCATGTATACGGTGC
TGACCCTCTCTGGAACGACGACAGCGGTGCCTGGGAGTCCTGTGGACAGC
CGTGTGAAGCAATTGGTGGATATGGAGACGCCTCGTCAGCAGCTACCGCC
GACGTGGTCGTGCTGGACATACAAACCTTCAGATCTGTACCGTGGGCCCG
ACCGGCGAAACAGATATGGGTGGGAACATACTTTGAGTCCCCTGATCATT
ACCCGAACCGGAAAAACCCTCAAATCATGTCACAATTCAATGTAACGATG
GGGTTCCGCCCCGATGATGACCTTCCAGTCTTCAACATGGTGTACGATAC
CATGAAGGGCTTCGCTGGCATTACTAATCTTACACTTCCGACCTGGGAAG
CGAAGCAAGCCCGTCCTGAATTGATGTCTGTCTGGATCTCCAACTGCAAC
ACGGACCGCACGCACCGGAAAGATATTCTTAAGCAGCTTGCATCTTCCAA
GATCTCGTATGCCTCCTACGGCCGCTGCTGGAACACGCATTCCTCCGCGC
AAGGTGTGACGGCATTGACGGATGCAGATTGGCGGCGCTACGGTTCTCAA
AATCTGGGCGCGGAACTTGTCGCTGTTGCCGCTCAatacctcttcttctt
tgcgGCAGAGAATTCAGATTATCCGTACTACATCACCGAAAAGGTCTTTC
ATGGACTTGCCGCAGGATCAGTACCTGTCTACGTAGGGGACGCAGAGAAT
CTAAAGAAGATTGCCCCACCTCATTCGATTATTTATGCGAATGATTTTGA
ATCCGTGGGAGCCTTGGCTTCTCATCTGCACACGGTGGCGCAAAATCCCG
AGCTTTACGAGCAATATTTGAAATGGCGACAAGATTCTGACGCGCTCAAC
AAACTTGAAGCGATGATGGCTCTTCCCGCATGGGCATCCACGCACGGACG
CGAATATGCATGTGCATTGTGTGAGTACATGCACGCCATTGGCAGCTGA back to top
|