EWM20649.1, cds10025 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|585100448|gb|EWM20649.1| (fucosyltransferase 9 [Nannochloropsis gaditana]) HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0 Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query: 1 MFRSPVRKLGYQTRCHNPGIRWILIILFVAWISCAFLFLHSFQSVRYKMLFSKKILPSISMAVETAQPSSSLDTYLHLRSRARQAFNITDKSISMKTEKVDIPKRIRIAQYSHVYGADPLWNDDSGAWESCGQPCEAIGGYGDASSAATADVVVLDIQTFRSVPWARPAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIGS 432
MFRSPVRKLGYQTRCHNPGIRWILIILFVAWISCAFLFLHSFQSVRYKMLFSKKILPSISMAVETAQPSSSLDTYLHLRSRARQAFNITDKSISMKTEKVDIPKRIRIAQYSHVYGADPLWNDDSGAWESCGQPCEAIGGYGDASSAATADVVVLDIQTFRSVPWARPAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIGS
Sbjct: 1 MFRSPVRKLGYQTRCHNPGIRWILIILFVAWISCAFLFLHSFQSVRYKMLFSKKILPSISMAVETAQPSSSLDTYLHLRSRARQAFNITDKSISMKTEKVDIPKRIRIAQYSHVYGADPLWNDDSGAWESCGQPCEAIGGYGDASSAATADVVVLDIQTFRSVPWARPAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIGS 432
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|443700225|gb|ELT99297.1| (hypothetical protein CAPTEDRAFT_179280 [Capitella teleta]) HSP 1 Score: 111.694 bits (278), Expect = 1.659e-23 Identity = 89/313 (28.43%), Postives = 141/313 (45.05%), Query Frame = 0
Query: 130 SCGQPCEAIGGYGDASSAATADVVVLDIQTFRSVPWA-------RPAKQIWVGTYFESPDH-YPNRKNPQIMSQFNVTMGFRPDDDLPVF---NMVYDTMKGFAGI--TNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHA 429
+C CE D +D ++ +I+ S W R KQ+WV E P H YP+ N S FN T R D D+P++ M D ++ + +N ++P + L S +SNCNT R++ Q S + A YG+CW + + ++N A L V +++F+ + EN+ Y+TEK ++ L G +PV + D +++++APP S I+ DF+S LA HL V+Q+ LY+ Y KWR K ++A +Y C LC +H
Sbjct: 80 TCPYQCEFTS---DRRRLNDSDALLFNIRNLES-SWGYDLPSEPRKIKQVWVAHSAEPPQHTYPHPAN--FPSVFNWTSFVRADSDVPLYYKKMMRSDELRTNQRVIWSNTSVPKLPVISEKRALASWLVSNCNT--YSRRERYVQRLKSFVKVAIYGQCWGRNCNR---------------AENQSACLEEVK-KHIFYLSFENALCTGYVTEKFWNALVWGMIPVVMADRASVEQVAPPGSYIHVEDFDSPEELARHLRNVSQDQALYQSYFKWR-------KTHVLVA----------DYFCDLCSRLHT 351
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|443700220|gb|ELT99292.1| (hypothetical protein CAPTEDRAFT_36020, partial [Capitella teleta]) HSP 1 Score: 107.457 bits (267), Expect = 7.956e-23 Identity = 79/266 (29.70%), Postives = 126/266 (47.37%), Query Frame = 0
Query: 142 GDASSAATADVVVLDIQTFRSVPWA-------RPAKQIWVGTYFESPDH-YPNRKNPQIMSQFNVTMGFRPDDDLPVF---NMVYDTMKGFAGIT--NLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQ 394
D +D ++ +I+ S W R KQ+WV E P H YP+ N S FN T R D D+P++ M D ++ + N ++P + L S +SNCNT R++ Q S + A YG+CW + + ++N A L V +++F+ + EN+ Y+TEK ++ L G +PV + D +++++APP S I+ DF+S LA HL V+Q+ LY+ Y KWR+
Sbjct: 5 SDRRRLNDSDALLFNIRNLES-SWGYDLPSEPRKIKQVWVAHSAEPPQHTYPHPAN--FPSVFNWTSFVRADSDVPLYYKKMMRSDELRTNQRVIWRNTSVPKLPVISEKRALASWLVSNCNT--YSRRERYVQRLKSFVKVAIYGQCWGRNCNR---------------AENQSACLEEVK-KHIFYLSFENALCTGYVTEKFWNALVWGMIPVVMADRASIEQVAPPGSYIHVEDFDSPEELARHLRNVSQDQALYQSYFKWRK 249
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|298713187|emb|CBJ26943.1| (Alpha-(1,3)-fucosyltransferase, family GT10 [Ectocarpus siliculosus]) HSP 1 Score: 108.612 bits (270), Expect = 2.623e-22 Identity = 89/301 (29.57%), Postives = 141/301 (46.84%), Query Frame = 0
Query: 143 DASSAATADVVVLDIQTFR---SVPWARPAKQIWVGTYFESPDHYPN----RKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLT----LPTWEAKQ----ARPELMSVWISNCNT-DRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPY-YITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKL-EAMMALPAWASTHGREYACALCE 425
D S AD V+ + TF P +P +V E P Y N +N Q MS+F+++M + + D+P+ G+ G ++ + P KQ P+ ++ ++SNC T+R +++L + S+G C + Q V G+ N VAV Y F A EN++ Y+TEKV++GL +G++PVY G AEN++ P S++ A+DF S L +HL +A N E YE Y KWR D + + E +++ S +G C LC+
Sbjct: 148 DRSLLPRADGVLFHLPTFNKKDGFPKQKPPAADYVFANLE-PTTYENVQPLLRNKQFMSKFDLSMTYERNSDVPL---------GYVGSSSTSRYFKAPKASFKQKDGFGSPDAIAAFVSNCKAAGATNRFAYMEELMKHATVH-SFGYCLHNREEPQLVPG--------SGATNRQENKVAVLGHYKFLLAFENNNQIRDYVTEKVYNGLQSGTLPVYWG-AENVEDFVPKGSVVKASDFSSPADLGNHLKMLAANEEAYEAYFKWRDDPEEERRFAEKVIS----RSAYGVNAMCRLCD 424
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|321472833|gb|EFX83802.1| (hypothetical protein DAPPUDRAFT_315506 [Daphnia pulex]) HSP 1 Score: 103.99 bits (258), Expect = 8.239e-21 Identity = 113/427 (26.46%), Postives = 181/427 (42.39%), Query Frame = 0
Query: 22 WILIILFVAWISCAFL-FLHSFQSVRYKMLFSKKILPSISMAVETAQPSSSLDTYLHLRSRARQAFNITDKSISMKTEKVDIPKR-----IRI----AQYSHVYGADPLWNDDSGAWESCGQPCEAIGGYGDASSAATADVVVLDIQTFRSVPWARPAKQIWVGTYFESPDH--YPNRKNPQI-MSQFNVTMGFRPDDDLPVFNMVYDTMK-------GFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMH 428
+I ++ F+A+I+ L HS ILP S++ + Q S + A N T K+++ KT ++D+ + ++I + +S +PL C P + D S +DVVVL + T P R Q +V ESPD+ +P++ FN TM +R D D+ + + +K A I+N++ + + +L++ ++++C+T R++ ++QL S ++ YGRC S TD Y F+ A ENS P YITEK L SVP+ +G A N APPHS I A DF+S LA +L + ++ +LY +Y W++D D ++ L W C LCE H
Sbjct: 17 FIFVVCFLAFINYQHLGVTHS------------SILPKFSISRASQQQVSHAND-------AENTNNNTFKNLNKKTNQIDLSNQSSSDALKIILLWSTWSSTMADEPL------VKARC--PVTSCIFTADMSLIHQSDVVVLYVDTLTDFPLNRRPHQRFVFAQLESPDNTKMATINDPRLRYDYFNWTMTYRRDSDIFLRDYYGSVIKTNHYSKLNTAKISNISQEMTALIRGKSKLVAWFVAHCST-PIRREEYVRQL-SDFVTVDIYGRCGKDCPSNCDDLLRTD---------------------YKFYLAFENSWCPDYITEKFIRPLVYDSVPIVLGGA-NYSHFAPPHSYINARDFDSPKELADYLILLDKSDDLYARYFDWKRDHDI-----TLLDLSGW---------CDLCEMAH 378
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|919054902|ref|XP_013409401.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Lingula anatina]) HSP 1 Score: 102.449 bits (254), Expect = 2.117e-20 Identity = 84/300 (28.00%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 143 DASSAATADVVVLDIQTFRSVPWAR-PAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDL--------PVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVF-HGLAAGSVPVYVGD-AENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIG 431
D + A+ AD ++L Q + PW R P QIW+ ESP H P + + + N T+ +R D L P NM G + N + A + + ++ ++SNC DR R+ + +L + + YG C G+ + D R L + Y F+ + ENS+ YITEK F +GL +P+ +G ++ K+ APPHS I +DF+S LA +LH + +N +LY +Y +W+ ++N + C LC MH +G
Sbjct: 85 DRTMASKADAILLMGQAVK--PWHRKPWHQIWILYLLESPHHTPRLEG--LNNLINWTVSYRTDSTLMAPYGSYVPYGNMT----TGQDSVFNTPMKKNYA-AGKTKKIAWFVSNCGGDRNGRRRYVDEL-NKHMPVDIYGGC--------GIKTCSKEDPR---------CLDILDRDYKFYLSFENSNCRDYITEKFFLNGLGHDIIPITMGGRPDDYKRAAPPHSYINVDDFKSPKVLAEYLHKLDKNDDLYNEYFRWKSSFHSVNTF----------------FWCRLCRKMHEVG 341
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|919101111|ref|XP_013386915.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Lingula anatina]) HSP 1 Score: 102.064 bits (253), Expect = 3.205e-20 Identity = 84/301 (27.91%), Postives = 134/301 (44.52%), Query Frame = 0
Query: 143 DASSAATADVVVLDIQTFRSVPWAR-PAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDL--------PVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVF-HGLAAGSVPVYVGD-AENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIGS 432
D + A+ AD ++L Q + PW R P Q+W+ ESP H P + + + N T+ +R D L P NM T + FA T + K + ++ ++SNC DR R+ ++L + + YG C G+ + D L + Y F+ + ENS+ YITEK F +GL +P+ +G ++ K+ APPHS I +DF+S LA +LH + +N +LY +Y +W+ ++N + C LC MH +G
Sbjct: 85 DRTMASKADAILLMGQAVK--PWHRKPRHQVWILYLLESPHHTPRLEG--LNNLINWTVSYRTDSTLMAPYGSYVPYGNMT--TGQDFAFNTPMKKNYAAGKTKK---IAWFVSNCGGDRNGRRRYAEEL-NKHMPVDIYGGC--------GIKTCSKED---------PHCLDILDRDYKFYLSFENSNCRDYITEKFFLNGLGHDIIPITMGGRPDDYKRAAPPHSYINVDDFKSPKVLAEYLHKLDKNDDLYNEYFRWKSSFHSVNTF----------------FWCRLCRKMHEVGK 342
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|1183320434|gb|ORX50251.1| (hypothetical protein BCR32DRAFT_251836 [Anaeromyces robustus] >gi|1183342106|gb|ORX71033.1| hypothetical protein BCR32DRAFT_250148 [Anaeromyces robustus]) HSP 1 Score: 99.3673 bits (246), Expect = 1.717e-19 Identity = 76/239 (31.80%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 196 FNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLAS-SKISYASYGRCWNT---HSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAI 430
F+ + +R D D+P+ YD F + LP E + + +V+ISNC+ R R + LK+L +KI SYG C N + QG +A + +Y F A ENSD Y+TEK F L AGSVPV+ G A N+ AP HS I ANDFE+ LA L+ + ++ + YE YL+W++ + + LE ++ + S +C+ + +I
Sbjct: 104 FDYAIDYRLDADVPI-PYTYD----FFNFSKPALPLKEKGKDGRGIAAVFISNCSA-RNSRLEFLKELMKYAKID--SYGMCLNNKDIYEEDQGDSAWNSK--------------MNTIRKYKFTLAFENSDDRDYVTEKFFQPLEAGSVPVFYGTA-NIADFAPEHSYIDANDFENAKELAEFLNHLDKDDKEYESYLEWKKKNKLGDNLEHLIEIRKLNS---------ICQLLQSI 310
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|873227650|emb|CEM17847.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 100.908 bits (250), Expect = 2.427e-19 Identity = 90/306 (29.41%), Postives = 144/306 (47.06%), Query Frame = 0
Query: 131 CGQPCEAIGGYGDASSAATADVVVL------DIQTFRSVPWARPAKQIWVGTYFESPDHYPNRKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCW-NTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAP-PHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQ--DSDALNKLEAMMALPAWASTHGREYACALCEY 426
C PC A + AD+VV +++T + +P Q + T ES +YP+ K+ + +F++ + D D+P +Y +G+ + LP ++ R L+S SNC T + R D + L S IS S+G C N + + T + + W E V + + F A ENSD P Y+TEK L AG+VP+ A N + AP PHS I A+DFES ALA +L + + E Y++YL+W++ S++ +L + +P + +C LC +
Sbjct: 260 CDVPCRLTHDRSWAENGK-ADIVVFGLHLENEVETLQKSGKKKP-HQYYAVTSLESDVNYPSLKDKNNLKRFDLKTTYHLDSDVP---RIYFGYRGY----DWMLPPRAKRKDR--LVSFVASNC-TPKNGRTDFVMSL-SRYISVQSFGHCLRNANPNDVLETPIHNDRWH---------EKVVMLQHFKFNVAFENSDTPDYVTEKFGQALVAGTVPIVKSRANNYETFAPHPHSYIVADDFESPKALAEYLLYLNDHDEEYDKYLEWKRVGPSESFRRL-LELNIP--------DSSCHLCRF 534
BLAST of EWM20649.1 vs. NCBI_GenBank
Match: gi|957837718|ref|XP_014669071.1| (PREDICTED: alpha-(1,3)-fucosyltransferase C-like [Priapulus caudatus]) HSP 1 Score: 99.7525 bits (247), Expect = 3.543e-19 Identity = 93/319 (29.15%), Postives = 130/319 (40.75%), Query Frame = 0
Query: 120 LWNDDSGAWESCGQPCEAIGGYGDASSAATADVVVLDIQTFRS----VPWARPAKQIWVGTYFESPD--HYPNRKNPQIMSQFNVTMGFRPDDDLPVFNMVYDTMKGFAGITNLTLPTWEAKQARPELMSVWISNCNTDRTHRKDILKQLASSKISYASYGRCWNTHSSAQGVTALTDADWRRYGSQNLGAELVAVAAQYLFFFAAENSDYPYYITEKVFHGLAAGSVPVYVGDAENLKKIAPPHSIIYANDFESVGALASHLHTVAQNPELYEQYLKWRQDSDALNKLEAMMALPAWASTHGREYACALCEYMHAIGS 432
LW A G A D + +D V+ + +R+ VP R Q WV +E+P + +K FN TM +R D D +F V + + + A++ + L + W+S+C TD R++ L + I +GR N G T D DW + Y F+FA ENS Y+TEK F LA VPV +G A+ APPHS I DF SV L ++L VA N LY Y W++ D + A + W C LCE +HA S
Sbjct: 102 LWTHMYRASNFSGCAVSACDVTSDRTRLKESDAVMFTMALYRAHKHGVPEYRRPDQRWVFVTYEAPPVVRWIYKKLDAFNGWFNWTMSYRRDSD--IFFQVGNVARRRTPYDTAASIDYAARKTK--LATWWMSHCPTD--DRREYLVKHIKRYIPVDVFGRTDNC-----GQTVCHDCDWS-----------AMLRDTYYFYFAFENSICKDYVTEKFFRSLANDVVPVVLGGAK-YTDTAPPHSYIDVRDFRSVKELTNYLQLVAGNSTLYNAYFAWKR--DYVIDTSAAVYQNRW---------CQLCEKLHAPAS 386 The following BLAST results are available for this feature:
BLAST of EWM20649.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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