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Properties
| Property Name | Value |
|---|
| Product | peptidase s28 family protein |
| Orig transcript id | gnl|cribi|Naga_100112g17.5455.mrna |
| Orig protein id | gnl|cribi|Naga_100112g17.5455 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:940235..945362 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1004 ID=rna1004|Name=rna1004|organism=Nannochloropsis gaditana|type=mRNA|length=300bp
ATGGGTACGGATTTGATTGCGGGCCACAGCGCACATTGCTTTCAAGGTGC
ATCAGCCGAGCTGCGGTGTCTTTACGATCTGGGGGACTTTGTGGATGATT
ATGCCACAGATCAGTACGCACGAAACGATTTGGGCCTGTTTTTCTTCGTG
CTCTTCGACCTTGACGCCAAAGAGCCGTGGCGCGTGGAGGCCGTGCCCTT
GAAGCTAGATTTCTGTTTGACAAGGCTAGCCACAGGGAACACCCATGGAT
TTGAGAACCAGCGAAACGTCTGCTTCGGCTTTAATCTGACACTATCATAA back to topprotein sequence of rna1004 >rna1004-protein ID=rna1004-protein|Name=rna1004|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MQQIPSLAVALLLFVYVATITEAWLPPERCRGGELWQDLIARHPYLAESP
GLPQTWDAPVDHFDPNNTGTFKQRYFLDAQFFKAPENNGTGLVFLMIGGE
GTLTDPPSGFVKELGKQYAALLVSLEHRFYGASLPNEDMSTSSYARLLTI
DQALADLAAFSDFLQAEHFPETPLRFFTIGGSYPGALAAFYRIAYPGKTV
GSLSSSGVVNAILNFPDFDRVVAQAIGGHCADRLRNVTRAFEDALLVPAA
ACAAKGLFGCDCEMWDADFFYMLADAAAMVDQYGRKAELCSFLLEGLGTA
PTALEMLRGFADFTRSYYGPQFGSSCFYDSRCAADLKKATLNERSWRWQK
CSELAYFQVAPTERDAEGGSVALRSGQVSLEYHIEQCQRIFGDSVGMPAV
KSVNDRFGGAQPTATRVFYSDFSDDPWRAASVQSEEGGPEVEQPFELAVY
DGAGHCSDLHEPTAGDHPNLVKLRGRFEAYLTQWLIEETEEVI back to topmRNA from alignment at CM002456.1:940235..945362+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1004 ID=rna1004|Name=rna1004|organism=Nannochloropsis gaditana|type=mRNA|length=5128bp|location=Sequence derived from alignment at CM002456.1:940235..945362+ (Nannochloropsis gaditana)
CAAATTAATGCCCGAGGCCCTTAGCCTTACCCCCCGCTCCGGCCACTTGC
CAGGTGTGTGCTTTCATACGCCTTTTACGTCATTGCTTAAGTAAGTGCGT
CTCCTATCATTGCGCCCTGTCTAGACAGCAGGTCTCTTCCATGCAACAAA
TCCCCTCGCTTGCCgtcgctcttctccttttcgtGTATGTAGCGACAATT
ACTGAAGCATGGTTACCACCTGAGCgatgccgggggggggaattaTGGCA
AGACTTGATTGCACGACACCCATACCTGGCGGAGAGTCCCGGTCTCCCGC
AAACTTGGGATGCGCCCGTGGATCATTTCGACCCTAATAACACCGGCACG
TTCAAGCAGCGATATTTCCTCGATGCACAATTTTTCAAGGCGCCGGAAAA
CAACGGTACGGGCTTGGTTTTCCTTATGatcggaggggaaggcactCTGA
CGGATCCGCCCTCGGGATTCGTCAAGGAGCTGGGCAAGCAGTacgctgcc
ctccttgtctcgcTCGAACATCGTTTCTATGGAGCAAGCCTCCCGAACGA
GGACATGAGCACGTCGTCATACGCGCGGCTCCTGACCATTGACCAGGCGT
TGGCGGACTTGGCAGCGTTCAGTGACTTCTTGCAGGCCGAACACTTTCCT
GAGACACCGCTACGCTTCTTTACCATAGGAGGCTCCTATCCTGGGGCCCT
GGCTGCCTTCTACCGCATCGCCTATCCAGGGAAGACTGTgggctccctct
cctcctcgggggtCGTGAATGCCATTCTGAACTTTCCAGATTTCGACAGG
GTGGTTGCTCAGGCCATCGGTGGGCATTGCGCCGACCGGCTCCGGAATGT
GACGCGAGCATTTGAAGACGCGCTGCTGGTCCCAGCGGCAGCCTGTGCGG
CCAAGGGGCTTTTCGGATGCGATTGCGAGATGTGGGATGCGGATTTTTTC
TACATGCTGGCAGATGCTGCAGCCATGGTTGACCAGTACGGACGAAAAGC
AGAGCTGTGCTCGTTTCTCCTCGAAGGCCTCGGTACCGCCCCTACTGCCC
TCGAAATGCTTCGGGGCTTCGCCGATTTCACTCGAAGCTATTACGGCCCT
CAGTTCGGCTCCTCGTGTTTCTATGACTCCCGGTGTGCGGCCGATTTGAA
GAAAGCAACCCTGAATGAGCGCTCGTGGCGCTGGCAAAAGTGCTCGGAGC
TTGCTTATTTTCAAGTGGCCCCGACAGAGCGCgatgcagagggaggaagc
gtcgCCTTGCGTTCAGGGCAAGTGTCGTTAGAGTACCACATTGAGCAGTG
TCAGCGGATATTTGGCGACTCCGTGGGTATGCCAGCTGTAAAGAGCGTCA
ATGATCGGTTCGGGGGGGCGCAGCCGACGGCCACACGTGTGTTTTACAGC
GACTTCTCTGACGACCCGTGGCGAGCGGCATCGGTTCAgagcgaagaggg
agggcccgaGGTGGAGCAACCCTTTGAGTTGGCGGTTTATGACGGGGCAG
GACACTGTAGTGATTTGCATGAGCCGACGGCGGGGGACCATCCGAATTTG
GTCAAGTTGCGCGGAAGATTTGAGGCATATTTGACACAGTGGTTGATaga
ggaaacggaggaggTAATCTAGAactatctatctatctagAACAAAGTTG
TTTGAAGGGCAGAATGATATAGCGCGGTGGGCTTTGAGGTCTTTCCCGGA
GACAGGTGCTCTGGTCATATCTGGGAGGGCGCTAACGGCCCGCATGCCTC
CAGGCGCACATCTTCAGGCAAGGACATGCTATCAGGCAGCCTGCAGGAAT
CACATAACGACACAAAATTTGTCTATAAATAAAGGTCTTGACTTTCATGG
ATCTCCCATGTCTcagacctcttccttcacacTACCACGCTCACCCCCCA
GTAATAGCGGCGGCCGCGTCATCAGGTATGCCCCCAGTCCCAGGAAAGGT
ATCGCCTTAAACAAGCTCAAGCTGATTTTTCCGACCTCGCCCCCTCGTCT
TTCAATGTCGTCGTCCAAAAGCCAGCCTTGAAAAACCCAGAAATAGAGCA
AATCTACCGCAAAGCTGAAGGTCAACCTGTCCGTAGTGAGTATTTGGACA
AAACTTCTCCATCGTTCGCTCAATTCCACTCCGTACACCTCTCCGCGTGC
CAAACCTGCCCACGCCAAAGAAAGAAGTCCCACTCCGATAAAGACTAATG
GTGGGATCTTGGACTCGCCCAAGGCCTCGGCTTTCGTCAGCGTATACCCC
TCCCCTGCCGGTTCGTCTGCTGGCTTCCAGACATTTTTACGCAGAACCAA
ATACGGTAAATAGACCGCGTTCGTCAAAAGCTGCATTCCCAAAACGTAGG
GCAGGAAGGCATTCTtcgccccccctctcccctctcccgtTTTCCTTGCC
TGGGTGCTCTCGCCGGCCACCTTCCCATCGACCATAAAACCACTGAAAAG
CGCGGCCCATGCCAGCAACAAATTGAAAAGCCCTTCCAAGCAGGGATGTA
GAACAGGTGAGGACTGGGGtgccaaggagggcatgaCAAGCCAGAAATTC
AAGGACAAGTCTCGCACCTCCGCCCATGTGGCAGGATCCAAGCTCAAGGC
GTTGGGTCCCGGGGCCACGGTGCTGAGGAAAACGAACCAGCAATAGAAGA
TGAATGCAGCTAAAGGTACCGCCTTGCGAGGCTCGTCGAGGAGGCGCCCG
ATAAGGGAGAGGACCGCCAGACTGGCGCTTCCGCTCTTAACCGTGGGCTC
GGGGACGTCGAAACCGGAGCATAGCTTCCCCGACACCCGATCCAGCTTGT
AGATGGAGGACCCTCGCGTAAAAGGGAGCTGCTTACCCTCGGACTCGACG
TGCCACTGCACGCCAACCACGTCGTCGCCGTCACTCACCTCGTCTAAGAC
GAAGGCAAACGAGTCGGGCAAAGCGTCAGCCACGCGAAACAAGTgggcct
tcaaggcctccttcccccggaaGGCGCCGGGATACAACGTATCTTCGTAC
GAGCAGTCTTCCGTAAAAAGGTCGACAGCTTCACTCATGCGACGCTGATT
CCAAAACTTGAAATAGGACCGAACTTGCCTcacacctcttccttcccttc
tccccttgccAAGGGATCTGTCGTTCCCGCCCTGGGAAGGCTTAGATTTA
AACAGGGAGGTTAAGATCGAAGTCGACGATTCATAAGGGGAATTACTATT
TTTCATTCTTGTCTTCTCAGTGGATTTACAAGTGTATCGCACGTTTACTG
GGGCATTGAGACCGAGCCGAGCGCGGATCTGTCGAGAGAGCAATGCTGCT
CGGGGTTGAGATACTTGAAACGCGAAGGGAGAGACGACTCTGTTCCGATG
TAAGGCAACAAACCCTTCGCTACTAGAGCAATATAATTGTGAAACAGCAC
GAGCTGTCGTGAAGCTCGTCCACAGAAAATGAATCAGAAAATTCAGGGAC
AGGACAACGGAGGAGGTTGTGAAGGAACTCGGTCGACACCTAGAACCTGA
CATTTTGTCGTGACGATGCGATAAATCCGTCTTGCTCCGCAAAATATTGG
AGGCGACTAATCTGTGGTACGTCCACGGCCTTCAGGCATTGAAATCTGTG
CAATTTGTGGGGTGCTTTTGCTTAGTGTCGTAAGCTTTATATTCGCGCAT
GCGTGGCAGATCTTAACGTCTGGGTGAGCGAGAACATCGCACGGCCCTGG
AACAAAAATAAGTGCTCCTGAATCAGATGCCTGTGAGAAAAGCCACCCAG
AGGTAAGGTGGTGTCCATCGATTAAATATGCACGTTTTCCAGCCGATTTA
GGCTTTTTCCATCGATGGTGGCCACTACAATGACTCACTCGTAGAGTCGT
GCTCAGTCCTACACAAACCCCCCAGGGAGCGCCAATTGAAATCCAATATG
AGGCGTCCAAGCATCGCAATCCTCGCCATAATTTCTTTGTATTGTTTGGA
TGGTGTCAACTCCTTTTTCCTGCCGCGTACCTCGCTTCCCACGCCTGCCT
CTAGCTCCCTTGGACGTGGCCGTAGTACACGAGCTCTGCAGATGAATGGA
GTCACCGACGCCATTCAAGCCTACGTTGGAATTTGGAGCCCCACTATTCG
CACGTAGGTCAACACAAATGAAGTTACTGTCGAAGGCTAAAAGATTTCTT
TCATGTTCAGTATTTGCCTGCTTCTTCACGGTACAGGATCGCAGCGGAGA
ACGACATCCCTACGGCGCTGATTAAATGGTTTCATGTAAGTTCACACGGA
TCTATGGGTCGTTTACGGATGATGATGTACCCAGTCATGATCCCACTATG
AATACCTGAAGCTGTCTGACTTTTTGCTGATGTGACACCCCTTTATCTCC
CAAAACATGCCACGTTCTTTTACGATACCCGGACATCCAGGGTGCCAACA
TGTACGTGCACTTTGATTTCTTGCCATACCATTTGTTCGATGTCAAAATC
AAATGCAGATTGAATTTAATGCTGTCTTATTATGTGGGATGGCCGCCACA
GGGGCATCGTCCTGACGACCATGGCCACATTCGGAGCTTACCTCGGCTGG
AAAATCCGTagcggcgatggagatgTAGAATTCACAGGCAAAACTGCCCG
TGAACTTCATCCTACCCTGATGGGCTtggctttcctcttttttttcctgg
gtGGGCAGGGTGGTCTTGTTTTGCTGGACGTGCAAAACCACCCCATTTTG
AACAGCACACACGCTGTGACGGGTTTGATCGGCATCGCACTTCTTGCGAT
GCAAGCACTTCTGCCCAAGCTTTTTGATGGCGACAACGGGAATAGTGCCC
GGACAATACATGCATACCTGGGCACGGCAACGATGGCCTTGCTCTTCATC
CACGCCGGCTTTGGCTTACAGTTGGGCTTTTCCTTATAAgtggggatgaa
ggagggagcagaatCGGAGCATCCATCCGAGCCTTGATCACTGCACGTGA
GAGGGTCTGACAATACTTGTCCCTAATCACATATGAATGAAGTTGGGAGG
CACGAAGTGAATGATTGAGTGAACATCGGGCCGATTGAATGACTAAGTTG
GGGACAGAGGAAACCTCACAAAAGTTGCTGAGAAAAACATATGACGCAAC
CAAAAGAGTCAGAGATTTCGAAGAAAGA back to topCoding sequence (CDS) from alignment at CM002456.1:940235..945362+ >rna1004 ID=rna1004|Name=rna1004|organism=Nannochloropsis gaditana|type=CDS|length=1482bp|location=Sequence derived from alignment at CM002456.1:940235..945362+ (Nannochloropsis gaditana)
ATGCAACAAATCCCCTCGCTTGCCgtcgctcttctccttttcgtGTATGT
AGCGACAATTACTGAAGCATGGTTACCACCTGAGCgatgccggggggggg
aattaTGGCAAGACTTGATTGCACGACACCCATACCTGGCGGAGAGTCCC
GGTCTCCCGCAAACTTGGGATGCGCCCGTGGATCATTTCGACCCTAATAA
CACCGGCACGTTCAAGCAGCGATATTTCCTCGATGCACAATTTTTCAAGG
CGCCGGAAAACAACGGTACGGGCTTGGTTTTCCTTATGatcggaggggaa
ggcactCTGACGGATCCGCCCTCGGGATTCGTCAAGGAGCTGGGCAAGCA
GTacgctgccctccttgtctcgcTCGAACATCGTTTCTATGGAGCAAGCC
TCCCGAACGAGGACATGAGCACGTCGTCATACGCGCGGCTCCTGACCATT
GACCAGGCGTTGGCGGACTTGGCAGCGTTCAGTGACTTCTTGCAGGCCGA
ACACTTTCCTGAGACACCGCTACGCTTCTTTACCATAGGAGGCTCCTATC
CTGGGGCCCTGGCTGCCTTCTACCGCATCGCCTATCCAGGGAAGACTGTg
ggctccctctcctcctcgggggtCGTGAATGCCATTCTGAACTTTCCAGA
TTTCGACAGGGTGGTTGCTCAGGCCATCGGTGGGCATTGCGCCGACCGGC
TCCGGAATGTGACGCGAGCATTTGAAGACGCGCTGCTGGTCCCAGCGGCA
GCCTGTGCGGCCAAGGGGCTTTTCGGATGCGATTGCGAGATGTGGGATGC
GGATTTTTTCTACATGCTGGCAGATGCTGCAGCCATGGTTGACCAGTACG
GACGAAAAGCAGAGCTGTGCTCGTTTCTCCTCGAAGGCCTCGGTACCGCC
CCTACTGCCCTCGAAATGCTTCGGGGCTTCGCCGATTTCACTCGAAGCTA
TTACGGCCCTCAGTTCGGCTCCTCGTGTTTCTATGACTCCCGGTGTGCGG
CCGATTTGAAGAAAGCAACCCTGAATGAGCGCTCGTGGCGCTGGCAAAAG
TGCTCGGAGCTTGCTTATTTTCAAGTGGCCCCGACAGAGCGCgatgcaga
gggaggaagcgtcgCCTTGCGTTCAGGGCAAGTGTCGTTAGAGTACCACA
TTGAGCAGTGTCAGCGGATATTTGGCGACTCCGTGGGTATGCCAGCTGTA
AAGAGCGTCAATGATCGGTTCGGGGGGGCGCAGCCGACGGCCACACGTGT
GTTTTACAGCGACTTCTCTGACGACCCGTGGCGAGCGGCATCGGTTCAga
gcgaagagggagggcccgaGGTGGAGCAACCCTTTGAGTTGGCGGTTTAT
GACGGGGCAGGACACTGTAGTGATTTGCATGAGCCGACGGCGGGGGACCA
TCCGAATTTGGTCAAGTTGCGCGGAAGATTTGAGGCATATTTGACACAGT
GGTTGATagaggaaacggaggaggTAATCTAG back to top
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