Naga_100112g17, gene967 (gene) Nannochloropsis gaditana

Overview
NameNaga_100112g17
Unique Namegene967
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:940235..945362 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100112g17
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:940235..945362 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL049ngnoL049Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02290NO03G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1004rna1004-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1004rna1004Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1004

>rna1004-protein ID=rna1004-protein|Name=rna1004|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MQQIPSLAVALLLFVYVATITEAWLPPERCRGGELWQDLIARHPYLAESP
GLPQTWDAPVDHFDPNNTGTFKQRYFLDAQFFKAPENNGTGLVFLMIGGE
GTLTDPPSGFVKELGKQYAALLVSLEHRFYGASLPNEDMSTSSYARLLTI
DQALADLAAFSDFLQAEHFPETPLRFFTIGGSYPGALAAFYRIAYPGKTV
GSLSSSGVVNAILNFPDFDRVVAQAIGGHCADRLRNVTRAFEDALLVPAA
ACAAKGLFGCDCEMWDADFFYMLADAAAMVDQYGRKAELCSFLLEGLGTA
PTALEMLRGFADFTRSYYGPQFGSSCFYDSRCAADLKKATLNERSWRWQK
CSELAYFQVAPTERDAEGGSVALRSGQVSLEYHIEQCQRIFGDSVGMPAV
KSVNDRFGGAQPTATRVFYSDFSDDPWRAASVQSEEGGPEVEQPFELAVY
DGAGHCSDLHEPTAGDHPNLVKLRGRFEAYLTQWLIEETEEVI
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Synonyms
Publications