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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100766g1.3157.mrna |
| Orig protein id | gnl|cribi|Naga_100766g1.3157 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:64483..66424 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10036 ID=rna10036|Name=rna10036|organism=Nannochloropsis gaditana|type=mRNA|length=270bp
ATGGTCTTTCCCCAATACATCCGGCAACTTGAAACTACGCCCAGCCTCGA
GCCACTCCGTAATCCATTTTCATTGGCTCTGGCGTCTTCGACGCAAATGC
CCAATAATGCAGTGTATGTTATGGAAAACCCATCACATCATGGGCTACAC
ATGAAACGAGGCCACAAAGTTTGTATGTCAGCCACCATCACGCCGTATGT
CTGCATCAAGGTAAAATATCAAGAAGAATTAAAGCAAAGAGGCGCTCCGA
TACAAAGGGCAACTTCCTAA back to topprotein sequence of rna10036 >rna10036-protein ID=rna10036-protein|Name=rna10036|organism=Nannochloropsis gaditana|type=polypeptide|length=205bp
MHTCHDSSSTFLFYLFLIGHSLTSFCRQAQARATSCKNKGPNKKIKYRPM
TPPAVIKETVLPADETVAKKQKIANGHGKASAAAADSQAAVTVLNDENVN
TPDARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDY
EATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVT
YKEGD back to topmRNA from alignment at KK037260.1:64483..66424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10036 ID=rna10036|Name=rna10036|organism=Nannochloropsis gaditana|type=mRNA|length=1942bp|location=Sequence derived from alignment at KK037260.1:64483..66424+ (Nannochloropsis gaditana)
ATgcagctccctccccccccgaaaCGTCAACAATGCCATCTTGTACACAC
TGGCGGATTCGGTTCACTCAACCCGGAGACGAACACCTTCATATTGGGGG
ATGCGTGGCAGGGACCTGGAGCTAACATTGTTTGCGTTCCGCACGCAGTG
CTTTGTGTTCTTGCAGCGAGGAAAGTGCCGATCTATGTGACAACGTCACG
AAACCCTTACAAGTCGCAACCCTTGCACGCAATGCCTCCCCACatccctg
cttttccttttccttcctagACATGGCGCTCCAAGCTGCACATGTATGCA
CACTTGTCACGATTCTTCCTCAACATTTCTTTTTTACTTGTTTCTCATTG
GACACAGCCTCACCTCCTTCTGCCGTCAAGCCCAAGCGAGGGCAACTTCG
TGCAAGAACAAAGGACCCAACAAGAAGATCAAATACAGGCCAATGACTCC
TCCAGCCGTGATCAAGGAGACCGTGCTGCCAGCAGATGAGACTGTCGCCA
AGAAACAAAAAGTAAGTCATGTAAAGGAGTGTTGGCACGCGGCAGGTCTA
CAAGAAACCAAAGGACAGTAAACTGGCACATAACAATCAGATGCCATACA
AGAGGATGCAGGAAAGATAGCCCCACAATCCGACAACGACTACAGTAGAA
AAGCCAAGCAATGTCAGGCTTTGTAGAAAAGATGCTAGGTCATACTCCAT
TGTGACGGATGACATCTAATGGTATTCTTCTgtcctgccttttccccgcc
cctcgcctgCAGATTGCGAACGGCCACGGCAAAgcctccgctgccgccgc
cgatTCTCAAGCGGCGGTCACAGTTCTGAACGACGAGAATGTAAGGCGCA
CAGAGGAGGTCTGCGGAAGTAAGGGACGGAAGAGAGTCATGAAAAAGTTA
TAAAAGCGGCCCGCTGAGACGGAGCGTAAGGACTGAGAGGCCGGGCGCCT
GACGTGTCGGGAGGTTGACCTTACAGGGAAAGACGCGACTGTGGCTGCTC
AATCAATGATGCTCATCGCAAAATACTCACTCTTGACTCTGTACTGTTCT
CcaacttccctccctccctccctccctccctccctccctccctgcaggtC
AACACCCCGGACGCCCGCATCTACGAATACGTCTCTGCCTGTAACCCCGA
CATGCCACCCATTCCAGCCCTCGCCCATCCTCCCGAACTTCATGCTTCGg
gtacgccctccctccctccctccctccctccctcccaccctttcctgcct
tcctgcCTGTGTACCTCTCAATTTCTGTATTTGTTGCCTGACGTTGACGT
GCGAAATATACGGTATGTCTCCCTGGGAGGTGTCCATCCTGTGTGCAGGA
CTGCGACCGCCCCGGCGCAAGAATTTCGTACCAAGTTTTTGACAGGGACG
taccccttccccctccctccctccctccctccctccctccctccctccct
ccctccctcccaggcccgaCCCGCGTCATTGCCTTCGACCTCTCGGCCCA
CATGGGCGTCGACTACGAGGCCACGTCGCCCAACCTGCTGGCGGCGTACG
TCCGGGTATTGCGGGGGGAGTCCATTGAGACCCAAGCGTGCGCCACGTCT
CAGGTGCGGCctcgggcgggaaggggaccTCGTCGCGGGCACGGTCCCTG
CGGTTTGCTTcccaggggaggggaggggaataTCGCGGAGGAGAGCATAA
AGCAGAAAGAAATGGATGCATGCGCTTCCCCCTCGGGACAAGAcagagag
gggcgaggatgggagagggcggcctCCTGAGGCCCGTGGCACattcccct
ccgcccttcccttcccccccgtcgacgaatgcccccccccttctccctcc
ctccccctctcagGCATTTTACGTGATCCGTGGCCAGGGCAAGAGCACAA
GCACCGAACACAGCCTCCAAGTCACCtacaaggagggagacc back to topCoding sequence (CDS) from alignment at KK037260.1:64483..66424+ >rna10036 ID=rna10036|Name=rna10036|organism=Nannochloropsis gaditana|type=CDS|length=3080bp|location=Sequence derived from alignment at KK037260.1:64483..66424+ (Nannochloropsis gaditana)
ATGCACACTTGTCACGATTCTTCCTCAACATTTCTTTTTTACTTGTTTCT
CATTGGACACAGCCTCACCTCCTTCTGCCGTCAAGCCCAAGCGAGGGCAA
CTTCGTGCAAGAACAAAGGACCCAACAAGAAGATCAAATACAGGCCAATG
ACTCCTCCAGCCGTGATCAAGGAGACCGTGCTGCCAGCAGATGAGACTGT
CGCCAAGAAACAAAAAATTGCGAACGGCCACGGCAAAgcctccgctgccg
ccgccgatTCTCAAGCGGCGGTCACAGTTCTGAACGACGAGAATgtCAAC
ACCCCGGACGCCCGCATCTACGAATACGTCTCTGCCTGTAACCCCGACAT
GCCACCCATTCCAGCCCTCGCCCATCCTCCCGAACTTCATGCTTCGggcc
cgaCCCGCGTCATTGCCTTCGACCTCTCGGCCCACATGGGCGTCGACTAC
GAGGCCACGTCGCCCAACCTGCTGGCGGCGTACGTCCGGGTATTGCGGGG
GGAGTCCATTGAGACCCAAGCGTGCGCCACGTCTCAGGCATTTTACGTGA
TCCGTGGCCAGGGCAAGAGCACAAGCACCGAACACAGCCTCCAAGTCACC
tacaaggagggagaccATGCACACTTGTCACGATTCTTCCTCAACATTTC
TTTTTTACTTGTTTCTCATTGGACACAGCCTCACCTCCTTCTGCCGTCAA
GCCCAAGCGAGGGCAACTTCGTGCAAGAACAAAGGACCCAACAAGAAGAT
CAAATACAGGCCAATGACTCCTCCAGCCGTGATCAAGGAGACCGTGCTGC
CAGCAGATGAGACTGTCGCCAAGAAACAAAAAATTGCGAACGGCCACGGC
AAAgcctccgctgccgccgccgatTCTCAAGCGGCGGTCACAGTTCTGAA
CGACGAGAATgtCAACACCCCGGACGCCCGCATCTACGAATACGTCTCTG
CCTGTAACCCCGACATGCCACCCATTCCAGCCCTCGCCCATCCTCCCGAA
CTTCATGCTTCGggcccgaCCCGCGTCATTGCCTTCGACCTCTCGGCCCA
CATGGGCGTCGACTACGAGGCCACGTCGCCCAACCTGCTGGCGGCGTACG
TCCGGGTATTGCGGGGGGAGTCCATTGAGACCCAAGCGTGCGCCACGTCT
CAGGCATTTTACGTGATCCGTGGCCAGGGCAAGAGCACAAGCACCGAACA
CAGCCTCCAAGTCACCtacaaggagggagaccATGCACACTTGTCACGAT
TCTTCCTCAACATTTCTTTTTTACTTGTTTCTCATTGGACACAGCCTCAC
CTCCTTCTGCCGTCAAGCCCAAGCGAGGGCAACTTCGTGCAAGAACAAAG
GACCCAACAAGAAGATCAAATACAGGCCAATGACTCCTCCAGCCGTGATC
AAGGAGACCGTGCTGCCAGCAGATGAGACTGTCGCCAAGAAACAAAAAAT
TGCGAACGGCCACGGCAAAgcctccgctgccgccgccgatTCTCAAGCGG
CGGTCACAGTTCTGAACGACGAGAATgtCAACACCCCGGACGCCCGCATC
TACGAATACGTCTCTGCCTGTAACCCCGACATGCCACCCATTCCAGCCCT
CGCCCATCCTCCCGAACTTCATGCTTCGggcccgaCCCGCGTCATTGCCT
TCGACCTCTCGGCCCACATGGGCGTCGACTACGAGGCCACGTCGCCCAAC
CTGCTGGCGGCGTACGTCCGGGTATTGCGGGGGGAGTCCATTGAGACCCA
AGCGTGCGCCACGTCTCAGGCATTTTACGTGATCCGTGGCCAGGGCAAGA
GCACAAGCACCGAACACAGCCTCCAAGTCACCtacaaggagggagaccAT
GCACACTTGTCACGATTCTTCCTCAACATTTCTTTTTTACTTGTTTCTCA
TTGGACACAGCCTCACCTCCTTCTGCCGTCAAGCCCAAGCGAGGGCAACT
TCGTGCAAGAACAAAGGACCCAACAAGAAGATCAAATACAGGCCAATGAC
TCCTCCAGCCGTGATCAAGGAGACCGTGCTGCCAGCAGATGAGACTGTCG
CCAAGAAACAAAAAATTGCGAACGGCCACGGCAAAgcctccgctgccgcc
gccgatTCTCAAGCGGCGGTCACAGTTCTGAACGACGAGAATgtCAACAC
CCCGGACGCCCGCATCTACGAATACGTCTCTGCCTGTAACCCCGACATGC
CACCCATTCCAGCCCTCGCCCATCCTCCCGAACTTCATGCTTCGggcccg
aCCCGCGTCATTGCCTTCGACCTCTCGGCCCACATGGGCGTCGACTACGA
GGCCACGTCGCCCAACCTGCTGGCGGCGTACGTCCGGGTATTGCGGGGGG
AGTCCATTGAGACCCAAGCGTGCGCCACGTCTCAGGCATTTTACGTGATC
CGTGGCCAGGGCAAGAGCACAAGCACCGAACACAGCCTCCAAGTCACCta
caaggagggagaccATGCACACTTGTCACGATTCTTCCTCAACATTTCTT
TTTTACTTGTTTCTCATTGGACACAGCCTCACCTCCTTCTGCCGTCAAGC
CCAAGCGAGGGCAACTTCGTGCAAGAACAAAGGACCCAACAAGAAGATCA
AATACAGGCCAATGACTCCTCCAGCCGTGATCAAGGAGACCGTGCTGCCA
GCAGATGAGACTGTCGCCAAGAAACAAAAAATTGCGAACGGCCACGGCAA
AgcctccgctgccgccgccgatTCTCAAGCGGCGGTCACAGTTCTGAACG
ACGAGAATgtCAACACCCCGGACGCCCGCATCTACGAATACGTCTCTGCC
TGTAACCCCGACATGCCACCCATTCCAGCCCTCGCCCATCCTCCCGAACT
TCATGCTTCGggcccgaCCCGCGTCATTGCCTTCGACCTCTCGGCCCACA
TGGGCGTCGACTACGAGGCCACGTCGCCCAACCTGCTGGCGGCGTACGTC
CGGGTATTGCGGGGGGAGTCCATTGAGACCCAAGCGTGCGCCACGTCTCA
GGCATTTTACGTGATCCGTGGCCAGGGCAAGAGCACAAGCACCGAACACA
GCCTCCAAGTCACCtacaaggagggagacc back to top
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