EWM20669.1, cds10005 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|585100475|gb|EWM20669.1| (hypothetical protein Naga_100766g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 427.943 bits (1099), Expect = 8.228e-152 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query: 1 MHTCHDSSSTFLFYLFLIGHSLTSFCRQAQARATSCKNKGPNKKIKYRPMTPPAVIKETVLPADETVAKKQKIANGHGKASAAAADSQAAVTVLNDENVNTPDARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
MHTCHDSSSTFLFYLFLIGHSLTSFCRQAQARATSCKNKGPNKKIKYRPMTPPAVIKETVLPADETVAKKQKIANGHGKASAAAADSQAAVTVLNDENVNTPDARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD
Sbjct: 1 MHTCHDSSSTFLFYLFLIGHSLTSFCRQAQARATSCKNKGPNKKIKYRPMTPPAVIKETVLPADETVAKKQKIANGHGKASAAAADSQAAVTVLNDENVNTPDARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|585106619|gb|EWM24986.1| (Cupin, RmlC-type [Nannochloropsis gaditana]) HSP 1 Score: 126.331 bits (316), Expect = 2.027e-31 Identity = 63/103 (61.17%), Postives = 75/103 (72.82%), Query Frame = 0
Query: 103 DARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
D IYEY SA +P + PIP LA H GPTRVI FDL + V Y+ATSPNLLAAY+R+L GES+ETQA ATSQAFYVIRG+G S+S EH ++ +K GD
Sbjct: 21 DGIIYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHG-EIRWKAGD 122
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|676382761|ref|XP_009034659.1| (hypothetical protein AURANDRAFT_36501 [Aureococcus anophagefferens] >gi|323455241|gb|EGB11110.1| hypothetical protein AURANDRAFT_36501 [Aureococcus anophagefferens]) HSP 1 Score: 125.561 bits (314), Expect = 1.197e-30 Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
ARIYEY +A NPD+P IP L HP LH +GPTRVI FDLS+ +G TSPNL+A+YVRVL GE I T A ATSQA+YVIRG G ST++EH +VT+ GD
Sbjct: 65 ARIYEYGAAANPDLPAIPVLVHPASLHEAGPTRVIPFDLSSMIGGAAPCTSPNLMASYVRVLVGERISTAALATSQAYYVIRG-GGSTTSEHG-RVTWNTGD 164
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|612392730|ref|XP_007511885.1| (predicted protein [Bathycoccus prasinos] >gi|424513351|emb|CCO65973.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 125.176 bits (313), Expect = 2.347e-30 Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 0
Query: 103 DARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
DARIYEY SA NPDM PIP L HPP+ H G TR+I FD+ + +D + TSPNL+A+++R+ GE++ET A ATSQAFYVIRG G +TS EH + + GD
Sbjct: 89 DARIYEYGSAANPDMKPIPVLVHPPDWHERGETRIIPFDIDDFLEIDKQCTSPNLMASFIRICEGENLETTANATSQAFYVIRGSGCTTS-EHG-TINWDTGD 189
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|693500894|emb|CEF97267.1| (RmlC-like jelly roll fold [Ostreococcus tauri]) HSP 1 Score: 122.479 bits (306), Expect = 1.495e-29 Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A I+EY SA NPDM PIP L HP +LH SG TRVI FD++ + + TSPNL+A++VR+++GESIET A ATSQAFYVIRG G+S S EH ++++ GD
Sbjct: 35 AEIFEYGSAANPDMRPIPVLVHPADLHESGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHG-KISWSTGD 134
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|145344452|ref|XP_001416746.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144576972|gb|ABO95039.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 120.168 bits (300), Expect = 1.692e-29 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A I+EY SA NPDM PIP L HPP+LH G TRVI FD++ + ++ TSPNL+A++VR+++GE+IET A ATSQAFYVIRG G S EH ++++ GD
Sbjct: 1 ASIFEYGSAANPDMRPIPVLVHPPDLHERGETRVIPFDINDFLEIEESCTSPNLMASFVRIVKGEAIETSANATSQAFYVIRGNGTSEG-EHG-KISWSTGD 100
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|255073367|ref|XP_002500358.1| (predicted protein [Micromonas commoda] >gi|226515621|gb|ACO61616.1| predicted protein [Micromonas commoda]) HSP 1 Score: 121.324 bits (303), Expect = 5.591e-29 Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A I+EY +A NPDM PIP L HPP LH G TR+I FD++ + ++ TSPNL+A++VRV GESIET+A ATSQAFYVIRG G STS+EH V++ +GD
Sbjct: 45 ADIFEYGAAANPDMAPIPVLVHPPSLHEEGETRIIPFDINDCLDIETACTSPNLMASFVRVRVGESIETKANATSQAFYVIRGTG-STSSEHG-TVSWGDGD 144
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|308802073|ref|XP_003078350.1| (unnamed protein product [Ostreococcus tauri]) HSP 1 Score: 121.324 bits (303), Expect = 9.396e-29 Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A I+EY SA NPDM PIP L HP +LH SG TRVI FD++ + + TSPNL+A++VR+++GESIET A ATSQAFYVIRG G+S S EH ++++ GD
Sbjct: 111 AEIFEYGSAANPDMRPIPVLVHPADLHESGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHG-KISWSTGD 210
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|1199288901|gb|OUS44037.1| (RmlC-like cupin domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 119.013 bits (297), Expect = 6.123e-28 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A I+EY SA NPDM PIP L HP +LH G TRVI FD++ + + TSPNL+A++VR+++GESIET A ATSQAFYVIRG G+S S EH ++++ GD
Sbjct: 111 AEIFEYGSAANPDMRPIPVLVHPADLHECGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHG-KISWSTGD 210
BLAST of EWM20669.1 vs. NCBI_GenBank
Match: gi|659861639|ref|WP_029908964.1| (dioxygenase [Hydrogenovibrio marinus] >gi|641455480|gb|KDN95146.1| dioxygenase [Hydrogenovibrio marinus]) HSP 1 Score: 111.309 bits (277), Expect = 4.193e-26 Identity = 55/102 (53.92%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 104 ARIYEYVSACNPDMPPIPALAHPPELHASGPTRVIAFDLSAHMGVDYEATSPNLLAAYVRVLRGESIETQACATSQAFYVIRGQGKSTSTEHSLQVTYKEGD 205
A EY+SA NP MP I + LH SGPTR+I FDLS + +DY ATSPNLLA +VR+ +GESI+T A TSQ FYVI GQGK+ +E +++ +K GD
Sbjct: 22 ADFKEYMSAVNPPMPKIDVASFAASLHQSGPTRIIPFDLSKSLEIDYPATSPNLLANFVRICKGESIKTSAKVTSQMFYVINGQGKTQMSEGTIE--WKTGD 121 The following BLAST results are available for this feature:
BLAST of EWM20669.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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